APPARENT LACK OF VESICULAR-ARBUSCULAR MYCORRHIZA (VAM) IN SEAGRASSES ZOSTERA MARINA L. AND THALASSIA TESTUDIUM BANKS EX KONIG

EPA Science Inventory

We examined two populations of Zostera marina L. and one of Thalassia testudinum Banks ex Konig for presence of vesicular-arbuscular mycorrhiza (VAM). None of these plants showed any VAM colonization. In addition, we were unable to find any literature references on the presence o...

Determining bathymetric distributions of the eelgrass Zostera marina L. in three turbid estuaries of the eastern North Pacific coast

EPA Science Inventory

Improved methods for determining bathymetric distributions of dominant intertidal plants throughout their estuarine range are needed. Zostera marina is a seagrass native to estuaries of the northeastern Pacific and many other sectors of the world ocean. The technique described ...

In Situ Carbon Stable Isotope Tracer Experiments Elucidate Carbon Translocation Rates and Allocation Patterns in Zostera marina L. (eelgrass)

EPA Science Inventory

The intertidal seagrass Zostera marina is an important species that provides critical habitat for a number of estuarine species. Despite its widespread distribution, there is limited information on seasonal patterns of carbon dynamics of plants growing in situ, particularly esti...

Effects of microtopographic variation and macroalgal cover on morphometrics and survival of the annual form of eelgrass (Zostera marina)

EPA Science Inventory

A disjunct population of the annual form of the seagrass Zostera marina that occurred in the upper intertidal zone of Yaquina Bay, Oregon was sampled to determine whether there were differences in recruitment, growth, survivorship and morphology associated with microtopographic l...

Hydroacoustic basis for detection and characterization of eelgrass (Zostera marina)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sabol, B.; McCarthy, E.; Rocha, K.

1997-06-01

Understanding the distribution and density of seagrasses is important for a variety of environmental applications. Physical techniques for detection and characterization are labor and cost intensive and provide little insight into spatial distribution. optical-based techniques are limited by water clarity - frequently resulting in systematic underestimation of the extent of seagrasses. Active hydroacoustic techniques have shown the ability to detect seagrasses but the phenomenology behind detection is poorly understood. Laboratory and in-situ hydroacoustic measurements are presented for eelgrass (Zostera marina), a common seagrass in the United States. Based on these data, hydroacoustic approaches for wide area detection and mapping aremore » discussed and several are demonstrated within areas of established eelgrass beds in Narragansett Bay, Rhode Island.« less

ABUNDANCE OF SEAGRASS (ZOSTERA MARINA L.) AND MACROALGAE IN RELATION TO THE SALINITY-TEMPERATURE GRADIENT IN YAQUINA BAY, OREGON, USA

EPA Science Inventory

The distribution and abundance of the seagrass, Zostera marina, and the associated macroalgae are described for Yaquina Bay, Oregon, U.S.A. Possible relationships between plant abundance and physical-chemical characteristics of the water column were also explored. Study sites w...

DESICCATION INDEX: A MEASURE OF DAMAGE CAUSED BY ADVERSE AERIAL EXPOSURE ON INTERTIDAL EELGRASS (ZOSTERA MARINA) IN AN OREGON (USA) ESTUARY

EPA Science Inventory

Eelgrass (Zostera marina) blade necrosis resulting from intertidal aerial exposure is describe. A desiccation index was developed to quantitatively assess this damage. This index was then used to evaluate the extent of desiccation damage across intertidal bathymetric slopes (st...

Influence of light, temperature and salinity on dissolved organic carbon exudation rates in Zostera marina L.

PubMed Central

2012-01-01

Background Marine angiosperms, seagrasses, are sentinel species of marine ecosystem health and function. Seagrass carbon budgets provide insight on the minimum requirements needed to maintain this valuable resource. Carbon budgets are a balance between C fixation, growth, storage and loss rates, most of which are well characterized. However, relatively few measurements of dissolved organic carbon (DOC) leaf exudation or rhizodeposition rates exist for most seagrass species. Here I evaluate how eelgrass (Zostera marina L.) DOC exudation is affected by a single factor manipulation (light, temperature or salinity). Eelgrass plants were hydroponically exposed to treatments in experimental chambers (separate leaf and rhizome/root compartments) with artificial seawater medium. Regression analysis of changes in the DOC concentration through time was used to calculate DOC exudation rates. Results Exudation rates were similar across all treatments in all experiments. For all experiments, pooled leaf DOC exudation ranged between 0.032 and 0.069 mg C gdw-1 h-1, while rhizodeposition ranged between 0.024 and 0.045 mg C gdw-1 h-1. These rates are consistent with previously published values and provide first-order estimates for mechanistic models. Conclusions Zostera marina carbon losses from either leaf exudation or rhizodeposition account for a small proportion of gross primary production (1.2-4.6%) and appear to be insensitive to short-term (e.g., hours to days) environmental variations in chamber experiments. Based on these preliminary experiments, I suggest that Z. marina DOC exudation may be a passive process and not an active transport process. PMID:22938529

Comparison of non-indigenous dwarf eelgrass (Zostera japonica) and native eelgrass (Z. marina) distributions in a northeast Pacific estuary: 1997-2014

EPA Science Inventory

This study addressed the following question: In a coastal estuary of the northeastern Pacific Ocean with a relatively large areal extent of the native eelgrass Zostera marina, is an expanding distribution of the non-indigenous dwarf eelgrass Z. japonica accompanied by a measurab...

Desulfovibrio zosterae sp. nov., a new sulfate reducer isolated from surface-sterilized roots of the seagrass Zostera marina.

PubMed

Nielsen, J T; Liesack, W; Finster, K

1999-04-01

A sulfate-reducing bacterium, designated strain lacT, was isolated from surface-sterilized roots of the benthic macrophyte Zostera marina. Cells were motile by means of a single polar flagellum. Strain lacT utilized lactate, pyruvate, malate, ethanol, L-alanine, fumarate, choline and fructose with sulfate as electron acceptor. In addition, fumarate, pyruvate and fructose were also degraded without an external electron acceptor. Sulfate could be substituted with thiosulfate, sulfite and elemental sulfur. Optimal growth was observed between 32.5 and 34.5 degrees C, at an NaCl concentration of 0.2 M and in a pH range between 6.8 and 7.3. The G + C content of the DNA was 42.7 +/- 0.2 mol%. Desulfoviridin and catalase were present. Strain lacT contained c-type cytochromes. Comparative 16S rRNA gene sequence analysis and the fatty acid pattern grouped this isolate into the genus Desulfovibrio. However, strain lacT differs from all other described Desulfovibrio species on the bases of its 16S rRNA gene sequence, the G + C content, its cellular lipid pattern and the utilization pattern of substrates. These characteristics establish strain lacT (= DSM 11974T) as a novel species of the genus Desulfovibrio, for which the name Desulfovibrio zosterae sp. nov. is proposed.

An evaluation of factors controlling the abundance of epiphytes on Zostera marina along an estuarine gradient in Yaquina Bay, Oregon, USA.

EPA Science Inventory

Epiphytes on seagrass (Zostera marina) growing in the lower intertidal were examined along an estuarine gradient within Yaquina Bay, Oregon over a period of 4 years. The Yaquina Estuary receives high levels of nutrients from the watershed during the wet season and from the ocean...

DESICCATION IS A LIMITING FACTOR FOR EELGRASS (ZOSTERA MARINA L.) DISTRIBUTION IN THE INTERTIDAL ZONE OF A NORTHEASTERN P{ACIFIC (USA) ESTUARY

EPA Science Inventory

Intertidal irradiance, temperature, and aerial exposure were measured for two years in intertidal Zostera marina beds located in Yaquina Bay (Newport, OR, USA). These physical data were correlated with plant growth and other metrics measured at intervals during the study. Pho...

Identification of Two Novel Amalgaviruses in the Common Eelgrass (Zostera marina) and in Silico Analysis of the Amalgavirus +1 Programmed Ribosomal Frameshifting Sites.

PubMed

Park, Dongbin; Goh, Chul Jun; Kim, Hyein; Hahn, Yoonsoo

2018-04-01

The genome sequences of two novel monopartite RNA viruses were identified in a common eelgrass ( Zostera marina ) transcriptome dataset. Sequence comparison and phylogenetic analyses revealed that these two novel viruses belong to the genus Amalgavirus in the family Amalgaviridae . They were named Zostera marina amalgavirus 1 (ZmAV1) and Zostera marina amalgavirus 2 (ZmAV2). Genomes of both ZmAV1 and ZmAV2 contain two overlapping open reading frames (ORFs). ORF1 encodes a putative replication factory matrix-like protein, while ORF2 encodes a RNA-dependent RNA polymerase (RdRp) domain. The fusion protein (ORF1+2) of ORF1 and ORF2, which mediates RNA replication, was produced using the +1 programmed ribosomal frameshifting (PRF) mechanism. The +1 PRF motif sequence, UUU_CGN, which is highly conserved among known amalgaviruses, was also found in ZmAV1 and ZmAV2. Multiple sequence alignment of the ORF1+2 fusion proteins from 24 amalgaviruses revealed that +1 PRF occurred only at three different positions within the 13-amino acid-long segment, which was surrounded by highly conserved regions on both sides. This suggested that the +1 PRF may be constrained by the structure of fusion proteins. Genome sequences of ZmAV1 and ZmAV2, which are the first viruses to be identified in common eelgrass, will serve as useful resources for studying evolution and diversity of amalgaviruses.

Identification of Two Novel Amalgaviruses in the Common Eelgrass (Zostera marina) and in Silico Analysis of the Amalgavirus +1 Programmed Ribosomal Frameshifting Sites

PubMed Central

Park, Dongbin; Goh, Chul Jun; Kim, Hyein; Hahn, Yoonsoo

2018-01-01

The genome sequences of two novel monopartite RNA viruses were identified in a common eelgrass (Zostera marina) transcriptome dataset. Sequence comparison and phylogenetic analyses revealed that these two novel viruses belong to the genus Amalgavirus in the family Amalgaviridae. They were named Zostera marina amalgavirus 1 (ZmAV1) and Zostera marina amalgavirus 2 (ZmAV2). Genomes of both ZmAV1 and ZmAV2 contain two overlapping open reading frames (ORFs). ORF1 encodes a putative replication factory matrix-like protein, while ORF2 encodes a RNA-dependent RNA polymerase (RdRp) domain. The fusion protein (ORF1+2) of ORF1 and ORF2, which mediates RNA replication, was produced using the +1 programmed ribosomal frameshifting (PRF) mechanism. The +1 PRF motif sequence, UUU_CGN, which is highly conserved among known amalgaviruses, was also found in ZmAV1 and ZmAV2. Multiple sequence alignment of the ORF1+2 fusion proteins from 24 amalgaviruses revealed that +1 PRF occurred only at three different positions within the 13-amino acid-long segment, which was surrounded by highly conserved regions on both sides. This suggested that the +1 PRF may be constrained by the structure of fusion proteins. Genome sequences of ZmAV1 and ZmAV2, which are the first viruses to be identified in common eelgrass, will serve as useful resources for studying evolution and diversity of amalgaviruses. PMID:29628822

MAPPING INTERTIDAL EELGRASS (ZOSTERA MARINA L.) IN THREE COASTAL ESTUARIES OF THE PACIFIC NORTHWEST USA USING FALSE-COLOUR NEAR-INFRARED AERIAL PHOTOGRAPHY

EPA Science Inventory

This study describes a hybrid technique of digitally classifying aerial photography used for mapping the intertidal habitat of eelgrass (Zostera marina L.) in Pacific Northwest USA estuaries. The large tidal range (2-3 m) in this region exposes most of this seagrass community at ...

Genome-wide transcriptomic responses of the seagrasses Zostera marina and Nanozostera noltii under a simulated heatwave confirm functional types.

PubMed

Franssen, Susanne U; Gu, Jenny; Winters, Gidon; Huylmans, Ann-Kathrin; Wienpahl, Isabell; Sparwel, Maximiliane; Coyer, James A; Olsen, Jeanine L; Reusch, Thorsten B H; Bornberg-Bauer, Erich

2014-06-01

Genome-wide transcription analysis between related species occurring in overlapping ranges can provide insights into the molecular basis underlying different ecological niches. The co-occurring seagrass species, Zostera marina and Nanozostera noltii, are found in marine coastal environments throughout the northern hemisphere. Z. marina is often dominant in subtidal environments and subjected to fewer temperature extremes compared to the predominately intertidal and more stress-tolerant N. noltii. We exposed plants of both species to a realistic heat wave scenario in a common-stress-garden experiment. Using RNA-seq (~7million reads/library), four Z. marina and four N. noltii libraries were compared representing northern (Denmark) and southern (Italy) locations within the co-occurring range of the species' European distribution. A total of 8977 expressed genes were identified, of which 78 were directly related to heat stress. As predicted, both species were negatively affected by the heat wave, but showed markedly different molecular responses. In Z. marina the heat response was similar across locations in response to the heatwave at 26°C, with a complex response in functions related to protein folding, synthesis of ribosomal chloroplast proteins, proteins involved in cell wall modification and heat shock proteins (HSPs). In N. noltii the heat response markedly differed between locations, while HSP genes were not induced in either population. Our results suggest that as coastal seawater temperatures increase, Z. marina will disappear along its southern most ranges, whereas N. noltii will continue to move north. As a consequence, sub- and intertidal habitat partitioning may weaken in more northern regions because the higher thermal tolerance of N. noltii provides a competitive advantage in both habitats. Although previous studies have focused on HSPs, the present study clearly demonstrates that a broader examination of stress related genes is necessary. Copyright �

Blue carbon stocks in Baltic Sea eelgrass (Zostera marina) meadows

NASA Astrophysics Data System (ADS)

Röhr, Maria Emilia; Boström, Christoffer; Canal-Vergés, Paula; Holmer, Marianne

2016-11-01

Although seagrasses cover only a minor fraction of the ocean seafloor, their carbon sink capacity accounts for nearly one-fifth of the total oceanic carbon burial and thus play a critical structural and functional role in many coastal ecosystems. We sampled 10 eelgrass (Zostera marina) meadows in Finland and 10 in Denmark to explore seagrass carbon stocks (Corg stock) and carbon accumulation rates (Corg accumulation) in the Baltic Sea area. The study sites represent a gradient from sheltered to exposed locations in both regions to reflect expected minimum and maximum stocks and accumulation. The Corg stock integrated over the top 25 cm of the sediment averaged 627 g C m-2 in Finland, while in Denmark the average Corg stock was over 6 times higher (4324 g C m-2). A conservative estimate of the total organic carbon pool in the regions ranged between 6.98 and 44.9 t C ha-1. Our results suggest that the Finnish eelgrass meadows are minor carbon sinks compared to the Danish meadows, and that majority of the Corg produced in the Finnish meadows is exported. Our analysis further showed that > 40 % of the variation in the Corg stocks was explained by sediment characteristics, i.e. dry density, porosity and silt content. In addition, our analysis show that the root : shoot ratio of Z. marina explained > 12 % and the contribution of Z. marina detritus to the sediment surface Corg pool explained > 10 % of the variation in the Corg stocks. The mean monetary value for the present carbon storage and carbon sink capacity of eelgrass meadows in Finland and Denmark, were 281 and 1809 EUR ha-1, respectively. For a more comprehensive picture of seagrass carbon storage capacity, we conclude that future blue carbon studies should, in a more integrative way, investigate the interactions between sediment biogeochemistry, seascape structure, plant species architecture and the hydrodynamic regime.

Experimental assessment of critical anthropogenic sediment burial in eelgrass Zostera marina.

PubMed

Munkes, Britta; Schubert, Philipp R; Karez, Rolf; Reusch, Thorsten B H

2015-11-15

Seagrass meadows, one of the world's most important and productive coastal habitats, are threatened by a range of anthropogenic actions. Burial of seagrass plants due to coastal activities is one important anthropogenic pressure leading to the decline of local populations. In our study, we assessed the response of eelgrass Zostera marina to sediment burial from physiological, morphological, and population parameters. In a full factorial field experiment, burial level (5-20cm) and burial duration (4-16weeks) were manipulated. Negative effects were visible even at the lowest burial level (5cm) and shortest duration (4weeks), with increasing effects over time and burial level. Buried seagrasses showed higher shoot mortality, delayed growth and flowering and lower carbohydrate storage. The observed effects will likely have an impact on next year's survival of buried plants. Our results have implications for the management of this important coastal plant. Copyright © 2015 Elsevier Ltd. All rights reserved.

Sediment Properties as Important Predictors of Carbon Storage in Zostera marina Meadows: A Comparison of Four European Areas

PubMed Central

Dahl, Martin; Deyanova, Diana; Gütschow, Silvia; Asplund, Maria E.; Lyimo, Liberatus D.; Karamfilov, Ventzislav; Santos, Rui; Björk, Mats; Gullström, Martin

2016-01-01

Seagrass ecosystems are important natural carbon sinks but their efficiency varies greatly depending on species composition and environmental conditions. What causes this variation is not fully known and could have important implications for management and protection of the seagrass habitat to continue to act as a natural carbon sink. Here, we assessed sedimentary organic carbon in Zostera marina meadows (and adjacent unvegetated sediment) in four distinct areas of Europe (Gullmar Fjord on the Swedish Skagerrak coast, Askö in the Baltic Sea, Sozopol in the Black Sea and Ria Formosa in southern Portugal) down to ~35 cm depth. We also tested how sedimentary organic carbon in Z. marina meadows relates to different sediment characteristics, a range of seagrass-associated variables and water depth. The seagrass carbon storage varied greatly among areas, with an average organic carbon content ranging from 2.79 ± 0.50% in the Gullmar Fjord to 0.17 ± 0.02% in the area of Sozopol. We found that a high proportion of fine grain size, high porosity and low density of the sediment is strongly related to high carbon content in Z. marina sediment. We suggest that sediment properties should be included as an important factor when evaluating high priority areas in management of Z. marina generated carbon sinks. PMID:27936111

Genetic structure of eelgrass Zostera marina meadows in an embayment with restricted water flow

USGS Publications Warehouse

Munoz-Salazar, R.; Talbot, S.L.; Sage, G.K.; Ward, D.H.; Cabello-Pasini, Alejandro

2006-01-01

Genetic structure of the seagrass Zostera marina in a coastal lagoon with restricted water flow, and with heterogeneous water residence times and oceanographic characteristics, was assessed using 8 polymorphic microsatellite loci. Analyses of genetic differentiation (??) and Bayesian clustering suggested that the Z. marina population in San Quintin Bay (SQB) is genetically substructured, with at least 4 genetically different groups: (1) West Head, (2) Mouth, (3) East Arm, and (4) East Head. The greatest ?? value was observed between the most distant sites (?? = 0.095). The lowest values were found among sites closest to the mouth of the coastal lagoon (?? = 0.000 to 0.009). The maximum likelihood approach showed that the sites at the mouth have a mixed pattern of gene flow without a unidirectional pattern. In contrast, there was a clear pattern of asymmetrical gene flow from the mouth towards the West Head. These results suggested that the restriction of water flow at the heads, current pattern, and the distance between sites can reduce genetic flow and promote genetic differences within Z. marina meadows in small water embayments such as SQB. Though the population is genetically substructured and a 14 % decline in cover has been detected, this study did not show evidence of a recent genetic bottleneck. In contrast, mouth sites have experienced a recent expansion in their population size, and also perhaps a recent influx of rare alleles from genetically distinct immigrants. ?? Inter-Research 2006.

Effect of abalone farming on seawater movement and benthic foraminiferal assemblage of Zostera marina in the inner bay of Wando, South Korea.

PubMed

Lee, Yeon Gyu; Choi, Yang Ho; Jeong, Da Un; Lee, Jung Sick; Kim, Yong Wan; Park, Jung Jun; Choi, Jae Ung

2016-08-15

Tidal current survey as well as geochemical and benthic foraminiferal analyses of sediment cores were conducted in an abalone farm and a Zostera bed to understand the degree to which the abalone farm facilities installed along a channel in a shallow sea affect the benthic environment and ecology. In the abalone farm, Ammonia beccarii-Pseudoparrella naraensis-Elphidium somaense-Rosalina globularis-Trochammina hadai and P. naraensis-E. somaense-A. beccarii-T. hadai assemblages appeared owing to an increase in the total nitrogen content from the biodeposits. The Zostera bed consisted of A. beccarii-P. naraensis-Buccella frigida-T. hadai assemblage owing to the gradual expansion of a brackish shallow-water environment by the rapidly decreasing current speed, and it may have flourished. Moreover, the total sulfur, Zn, Cr, and Cu contents in the sediments decreased remarkably more than those of the pre-abalone farming did, caused by the vigorous activity of Zostera marina physiology. Copyright © 2016 Elsevier Ltd. All rights reserved.

Photoacclimatory Responses of Zostera marina in the Intertidal and Subtidal Zones

PubMed Central

Park, Sang Rul; Kim, Sangil; Kim, Young Kyun; Kang, Chang-Keun; Lee, Kun-Seop

2016-01-01

Photoacclimatory responses of the seagrass Zostera marina in the intertidal and subtidal zones were investigated by measuring chlorophyll a fluorescence parameters, photosynthetic pigments, leaf δ13C values, and shoot morphology in two bay systems. Intertidal plants had higher carotenoid concentrations than subtidal plants to avoid photodamage under excess light conditions during the day. The maximum relative electron transport rate (rETRmax) and minimum saturation irradiance (Ek) of the intertidal plants were higher than those of the subtidal plants, whereas photosynthetic efficiency (α) and maximum quantum yield (Fv/Fm) were higher in subtidal plants. The intertidal plants also had significantly greater Stern–Volmer non-photochemical quenching (NPQ) than that of the subtidal plants. These results suggest that the subtidal plants photoacclimated to use limited light more efficiently, and the intertidal plants exhibited photosynthetic responses to minimize photodamage at excess irradiance. The δ13C values of leaf tissues were more negative in the intertidal plants than those in the subtidal plants, suggesting that the intertidal plants used atmospheric or dissolved CO2 for photosynthesis during emersion. Effective quantum yield (ΔF/Fm´) in the intertidal plants decreased more slowly after emersion than that in the subtidal plants, indicating higher desiccation tolerance of the intertidal plants. The intertidal plants also recovered more rapidly from desiccation damage than the subtidal plants, suggesting photosynthetic adaptation to desiccation stress. The photosynthetic plasticity of Z. marina in response to variable environmental conditions most likely allows this species to occur in the intertidal and subtidal zones. PMID:27227327

Photoacclimatory Responses of Zostera marina in the Intertidal and Subtidal Zones.

PubMed

Park, Sang Rul; Kim, Sangil; Kim, Young Kyun; Kang, Chang-Keun; Lee, Kun-Seop

2016-01-01

Photoacclimatory responses of the seagrass Zostera marina in the intertidal and subtidal zones were investigated by measuring chlorophyll a fluorescence parameters, photosynthetic pigments, leaf δ13C values, and shoot morphology in two bay systems. Intertidal plants had higher carotenoid concentrations than subtidal plants to avoid photodamage under excess light conditions during the day. The maximum relative electron transport rate (rETRmax) and minimum saturation irradiance (Ek) of the intertidal plants were higher than those of the subtidal plants, whereas photosynthetic efficiency (α) and maximum quantum yield (Fv/Fm) were higher in subtidal plants. The intertidal plants also had significantly greater Stern-Volmer non-photochemical quenching (NPQ) than that of the subtidal plants. These results suggest that the subtidal plants photoacclimated to use limited light more efficiently, and the intertidal plants exhibited photosynthetic responses to minimize photodamage at excess irradiance. The δ13C values of leaf tissues were more negative in the intertidal plants than those in the subtidal plants, suggesting that the intertidal plants used atmospheric or dissolved CO2 for photosynthesis during emersion. Effective quantum yield (ΔF/Fm´) in the intertidal plants decreased more slowly after emersion than that in the subtidal plants, indicating higher desiccation tolerance of the intertidal plants. The intertidal plants also recovered more rapidly from desiccation damage than the subtidal plants, suggesting photosynthetic adaptation to desiccation stress. The photosynthetic plasticity of Z. marina in response to variable environmental conditions most likely allows this species to occur in the intertidal and subtidal zones.

Biochemical characterization of the eelgrass Zostera marina at its southern distribution limit in the North Pacific

USGS Publications Warehouse

Cabello-Pasini, Alejandro; Munoz-Salazar, R.; Ward, D.H.

2004-01-01

The eelgrass Zostera marina L. is distributed along the Baja California Peninsula (Mexico) where it is exposed to a wide range of irradiances and temperatures that could promote changes in its biochemical composition. Consequently, the objective of this study was to characterize the variations in the levels of chlorophyll, carbohydrates, proteins, fiber, ash and calories in the shoots of Z. marina from the north (San Quintin) and south (Ojo de Liebre and San Ignacio lagoons) of the peninsula. Temperature in the southern lagoons was 5-6??C higher than in the northern lagoon; likewise, in situ irradiance was two-fold greater in the south than in the north. As a result of the lower irradiance levels, the concentration of chlorophyll in the shoots of Z. marina was twice as high (1.7 mg gWW-1) in the northern lagoon than in the southern ones (0.8 mg gWW-1). Similar to chlorophyll levels, the concentration of soluble carbohydrates in the shoots was greater in the northern lagoon than in the southern ones, suggesting that the high levels of chlorophyll are enough to compensate for the low irradiance levels and to maintain a positive carbon balance at San Quintin. On the other hand, the levels of proteins in the shoots from the north of the peninsula were slightly lower than those from the southern populations. In general, these results suggest that the different environmental conditions to which Z. marina is exposed along the peninsula impact its biochemical composition.

Cerium Binding Activity of Pectins Isolated from the Seagrasses Zostera marina and Phyllospadix iwatensis

PubMed Central

Khotimchenko, Yuri; Khozhaenko, Elena; Kovalev, Valeri; Khotimchenko, Maxim

2012-01-01

Cerium binding activity of three different water soluble pectin compounds of different origin was studied in a batch sorption system. The Langmuir, Freundlich and BET sorption models were adopted to describe the binding reactions between metal ions and pectin molecules. The Langmuir model provided the best fit. Within the pH range from 4.0 to 6.0, the largest amount of the cerium ions was bound by pectin isolated from the seagrass Phylospadix iwatensis in comparison to pectin extracted from the seagrass Zostera marina and pectin obtained from citrus peel (commercial grade). The Langmuir constants were also highest for the pectin samples isolated from the seagrass P. iwatensis. The results obtained from this study suggest that pectin is a prospective source for the development of radioisotope-removing pharmaceuticals. PMID:22690146

Science and Management of the Introduced Seagrass Zostera japonica in North America

EPA Science Inventory

Healthy seagrass is considered a prime indicator of estuarine ecosystem function. On the Pacific coast of North America, at least two congeners of Zostera occur: native Zostera marina, and introduced, Z. japonica. Z. japonica is considered “invasive” and therefore, ecologically...

Dwarf eelgrass, Zostera japonica: a malevolent, benevolent, or benign invasive ecosystem engineer?

EPA Science Inventory

Dwarf eelgrass, Zostera japonica, is an introduced ecosystem engineering species first reported on the US west coast in 1957. In some US Pacific Northwest estuaries its areal coverage now exceeds that of the native eelgrass species, Zostera marina. Natural resource management’s...

Susceptibility of seagrass to oil spills: A case study with eelgrass, Zostera marina in San Francisco Bay, USA.

PubMed

Fonseca, Mark; Piniak, Gregory A; Cosentino-Manning, Natalie

2017-02-15

Existing literature illustrates inconsistent responses of seagrasses to oil exposure, both in the field and in the laboratory. Here, we add a new study that combined morphometric, demographic and photophysiology assessments to determine the potential oiling impacts to eelgrass (Zostera marina) from the 2007 Cosco Busan event in San Francisco Bay. Shoot densities, reproductive status, and rhizome elongation of Z. marina were examined at sites with pre-spill data, and eelgrass photosynthetic efficiency was measured post-spill. Shoot densities and percent elongation of rhizome internodes formed after the oil spill varied but with no consistent relationship to adjacent shoreline cleanup assessment team (SCAT) oiling categories. Similarly, differences in seagrass photosynthetic efficiency were not consistent with SCAT oiling categories. While thresholds for negative impacts on seagrass in general remain to be defined, conclusive oiling indicators for degree and duration of exposure would be important considerations and need examination under controlled study. Copyright © 2016 Elsevier Ltd. All rights reserved.

The structure of genetic diversity in eelgrass (Zostera marina L.) along the North Pacific and Bering Sea coasts of Alaska

USGS Publications Warehouse

Talbot, Sandra L.; Sage, Kevin; Rearick, Jolene; Fowler, Megan C.; Muñiz-Salazar, Raquel; Baibak, Bethany; Wyllie-Echeverria, Sandy; Cabello-Pasini, Alehandro; Ward, David H.

2016-01-01

Eelgrass (Zostera marina) populations occupying coastal waters of Alaska are separated by a peninsula and island archipelago into two Large Marine Ecosystems (LMEs). From populations in both LMEs, we characterize genetic diversity, population structure, and polarity in gene flow using nuclear microsatellite fragment and chloroplast and nuclear sequence data. An inverse relationship between genetic diversity and latitude was observed (heterozygosity: R2 = 0.738, P < 0.001; allelic richness: R2 = 0.327, P = 0.047), as was significant genetic partitioning across most sampling sites (θ = 0.302, P < 0.0001). Variance in allele frequency was significantly partitioned by region only in cases when a population geographically in the Gulf of Alaska LME (Kinzarof Lagoon) was instead included with populations in the Eastern Bering Sea LME (θp = 0.128–0.172; P < 0.003), suggesting gene flow between the two LMEs in this region. Gene flow among locales was rarely symmetrical, with notable exceptions generally following net coastal ocean current direction. Genetic data failed to support recent proposals that multiple Zostera species (i.e. Z. japonica and Z. angustifolia) are codistributed with Z. marina in Alaska. Comparative analyses also failed to support the hypothesis that eelgrass populations in the North Atlantic derived from eelgrass retained in northeastern Pacific Last Glacial Maximum refugia. These data suggest northeastern Pacific populations are derived from populations expanding northward from temperate populations following climate amelioration at the terminus of the last Pleistocene glaciation.

The Structure of Genetic Diversity in Eelgrass (Zostera marina L.) along the North Pacific and Bering Sea Coasts of Alaska

PubMed Central

Talbot, Sandra L.; Sage, George K; Rearick, Jolene R.; Fowler, Meg C.; Muñiz-Salazar, Raquel; Baibak, Bethany; Wyllie-Echeverria, Sandy; Cabello-Pasini, Alejandro; Ward, David H.

2016-01-01

Eelgrass (Zostera marina) populations occupying coastal waters of Alaska are separated by a peninsula and island archipelago into two Large Marine Ecosystems (LMEs). From populations in both LMEs, we characterize genetic diversity, population structure, and polarity in gene flow using nuclear microsatellite fragment and chloroplast and nuclear sequence data. An inverse relationship between genetic diversity and latitude was observed (heterozygosity: R2 = 0.738, P < 0.001; allelic richness: R2 = 0.327, P = 0.047), as was significant genetic partitioning across most sampling sites (θ = 0.302, P < 0.0001). Variance in allele frequency was significantly partitioned by region only in cases when a population geographically in the Gulf of Alaska LME (Kinzarof Lagoon) was instead included with populations in the Eastern Bering Sea LME (θp = 0.128–0.172; P < 0.003), suggesting gene flow between the two LMEs in this region. Gene flow among locales was rarely symmetrical, with notable exceptions generally following net coastal ocean current direction. Genetic data failed to support recent proposals that multiple Zostera species (i.e. Z. japonica and Z. angustifolia) are codistributed with Z. marina in Alaska. Comparative analyses also failed to support the hypothesis that eelgrass populations in the North Atlantic derived from eelgrass retained in northeastern Pacific Last Glacial Maximum refugia. These data suggest northeastern Pacific populations are derived from populations expanding northward from temperate populations following climate amelioration at the terminus of the last Pleistocene glaciation. PMID:27104836

The Structure of Genetic Diversity in Eelgrass (Zostera marina L.) along the North Pacific and Bering Sea Coasts of Alaska.

PubMed

Talbot, Sandra L; Sage, George K; Rearick, Jolene R; Fowler, Meg C; Muñiz-Salazar, Raquel; Baibak, Bethany; Wyllie-Echeverria, Sandy; Cabello-Pasini, Alejandro; Ward, David H

2016-01-01

Eelgrass (Zostera marina) populations occupying coastal waters of Alaska are separated by a peninsula and island archipelago into two Large Marine Ecosystems (LMEs). From populations in both LMEs, we characterize genetic diversity, population structure, and polarity in gene flow using nuclear microsatellite fragment and chloroplast and nuclear sequence data. An inverse relationship between genetic diversity and latitude was observed (heterozygosity: R2 = 0.738, P < 0.001; allelic richness: R2 = 0.327, P = 0.047), as was significant genetic partitioning across most sampling sites (θ = 0.302, P < 0.0001). Variance in allele frequency was significantly partitioned by region only in cases when a population geographically in the Gulf of Alaska LME (Kinzarof Lagoon) was instead included with populations in the Eastern Bering Sea LME (θp = 0.128-0.172; P < 0.003), suggesting gene flow between the two LMEs in this region. Gene flow among locales was rarely symmetrical, with notable exceptions generally following net coastal ocean current direction. Genetic data failed to support recent proposals that multiple Zostera species (i.e. Z. japonica and Z. angustifolia) are codistributed with Z. marina in Alaska. Comparative analyses also failed to support the hypothesis that eelgrass populations in the North Atlantic derived from eelgrass retained in northeastern Pacific Last Glacial Maximum refugia. These data suggest northeastern Pacific populations are derived from populations expanding northward from temperate populations following climate amelioration at the terminus of the last Pleistocene glaciation.

Dokdonia flava sp. nov., isolated from the seaweed Zostera marina.

PubMed

Choi, Seon; Kang, Joo Won; Yoon, Jung-Hoon; Seong, Chi Nam

2018-03-01

A non-motile, proteorhodopsin-containing, yellow and rod-shaped bacterial strain, designated ZODW10 T , was isolated from the seaweed Zostera marina collected from the West Sea, Republic of Korea. Cells were Gram-stain-negative, aerobic and non-motile. The isolate required sea salts for growth. A carotenoid pigment was produced. A phylogenetic tree based on 16S rRNA gene sequences showed that strain ZODW10 T forms an evolutionary lineage within the radiation enclosing members of the genus Dokdonia with Dokdoniadiaphoros CIP 108745 T (96.7 % sequence similarity) as its nearest neighbour. The major fatty acids were iso-C15:0, iso-C17 : 0 3-OH and iso-C15 : 1 G. Strain ZODW10 T contained menaquinone 6 (MK-6) and phosphatidylethanolamine, an unidentified aminolipid and an unidentified polar lipid as the only isoprenoid quinone and the major polar lipids, respectively. The DNA G+C content of strain ZODW10 T was 36 mol%. On the basis of the present polyphasic characterization, it is suggested that the isolate represents a novel species of the genus Dokdonia, for which the name Dokdonia flava sp. nov. (type strain, ZODW10 T =KCTC 52953 T =JCM 32293 T ) is proposed.

The Importance of Zostera marina to a Local Food Web Based on the Analysis of Compound Specific Isotopes in Maquoit Bay, Gulf of Maine

NASA Astrophysics Data System (ADS)

Doolittle, H. A.; Johnson, B. J.; Ambrose, W. G.; Locke, W.; Harris, C. M.

2010-12-01

Zostera marina (also known as eelgrass) is an important primary producer in near shore ecosystems in the Gulf of Maine, providing both habitat and nutrients for a variety of organisms (e.g., crustaceans, polychaetes, gastropods, and fish). The purpose of this study is to use compound specific δ13C analyses of essential amino acids to determine the degree to which organic matter derived from isotopically distinct primary producers (e.g., eelgrass, phytoplankton, and epiphytic algae) contribute to the diets of snails, shrimp, and fish in an eelgrass system in Casco Bay. Maquoit Bay, located in northwestern Casco Bay, in the Gulf of Maine, is a shallow estuarine system that is characterized by silt and clay sized sediments and the presence of extensive eelgrass beds. Amino acid concentrations and δ13C compositions were determined for a variety of sample-types collected in July-August, 2010, from three sites in the study area, including muscle tissue from Tautogolabrus adspersus (cunner), Gasterosteus aculeatus (3-spined stickleback), Nassarius obsoletus (snail), and Mysis spp. (shrimp), seston (i.e., phytoplankton), Z. marina, and epiphytic algae. TFAA amino acid derivatives of the total hydrolyzate were analyzed by GC-FID for amino acid concentration, and by GC-c-IRMS- for carbon isotope composition. Muscle tissue was dominated by glutamic and aspartic acids, and leucine, whereas Zostera marina was dominated by aspartic and glutamic acids, and proline. Phenylalanine and leucine in Z. marina are approximately 10 ‰ enriched in 13C relative to these same amino acids in the seston. The carbon isotope values of these essential amino acids are significantly more enriched in 13C for N. obsoletus than for T. adspersus, G. aculeatus, and Mysis spp. These data suggest that organic matter derived from Z. marina and/or epiphytic algae is more important in the diets of N. obsoletus, and organic matter derived from seston is more important for the diets of T. adspersus, G

Oyster aquaculture impacts Zostera marina epibiont community composition in Akkeshi-ko estuary, Japan

PubMed Central

Nakaoka, Masahiro

2018-01-01

Coastal fisheries are in decline worldwide, and aquaculture has become an increasingly popular way to meet seafood demand. While finfish aquaculture can have substantial adverse effects on coastal ecosystems due mostly to necessary feed inputs, bivalves graze on natural phytoplankton and are often considered for their positive ecosystem services. We conducted two independent studies to investigate the effects of long-line Crassostrea gigas oyster aquaculture on Zostera marina seagrass beds and associated epibiont communities in Akkeshi-ko estuary, Japan. Results from both studies yielded no evidence of an effect of oyster aquaculture on the morphology, density, or biomass of Z. marina, but significant differences were apparent in the epibiont community. Reference seagrass beds located away from aquaculture had higher seagrass epiphyte loads and higher abundances of amphipods. Conversely, seagrass beds below aquaculture lines had higher sessile polychaete biomass and higher isopod abundances. Our results suggest that the presence of oyster aquaculture may have indirect effects on seagrass by changing epibiont community composition and relative abundances of species. One proposed mechanism is that cultured oysters feed on epiphytic diatoms and epiphyte propagules before they can settle on the seagrass, which reduces epiphyte loads and influences subsequent faunal settlement. If carefully implemented and monitored, long-line oyster aquaculture may be a sustainable option to consider as bivalve aquaculture expands to meet global seafood demand, but further work is needed to fully assess and generalize the community-level effects on seagrass epibionts. PMID:29795609

Oyster aquaculture impacts Zostera marina epibiont community composition in Akkeshi-ko estuary, Japan.

PubMed

Smith, Carter S; Ito, Minako; Namba, Mizuho; Nakaoka, Masahiro

2018-01-01

Coastal fisheries are in decline worldwide, and aquaculture has become an increasingly popular way to meet seafood demand. While finfish aquaculture can have substantial adverse effects on coastal ecosystems due mostly to necessary feed inputs, bivalves graze on natural phytoplankton and are often considered for their positive ecosystem services. We conducted two independent studies to investigate the effects of long-line Crassostrea gigas oyster aquaculture on Zostera marina seagrass beds and associated epibiont communities in Akkeshi-ko estuary, Japan. Results from both studies yielded no evidence of an effect of oyster aquaculture on the morphology, density, or biomass of Z. marina, but significant differences were apparent in the epibiont community. Reference seagrass beds located away from aquaculture had higher seagrass epiphyte loads and higher abundances of amphipods. Conversely, seagrass beds below aquaculture lines had higher sessile polychaete biomass and higher isopod abundances. Our results suggest that the presence of oyster aquaculture may have indirect effects on seagrass by changing epibiont community composition and relative abundances of species. One proposed mechanism is that cultured oysters feed on epiphytic diatoms and epiphyte propagules before they can settle on the seagrass, which reduces epiphyte loads and influences subsequent faunal settlement. If carefully implemented and monitored, long-line oyster aquaculture may be a sustainable option to consider as bivalve aquaculture expands to meet global seafood demand, but further work is needed to fully assess and generalize the community-level effects on seagrass epibionts.

The potential effects of global climate change on the distribution of native and introduced Zostera seagrasses on the Pacific Coast of North America

EPA Science Inventory

At least two seagrass species in the genus Zostera occur on the Pacific coast of North America: the native species Zostera marina L., and an introduced species, Z. japonica Ascher. & Graeb. Z. marina occurs along the entire Pacific coast of the United States and Canada. Zos...

Transplanting of the Seagrasses Zostera marina and Halodula wrightii for Sediment Stabilization and Habitat Development on the East Coast of the United States.

DTIC Science & Technology

1985-08-01

term basis (2-3 yr) do not account for substantial accretion or retention of • sediments (only 1 -3 cm above the natural bottom) in open-water areas...ND-Al6 224 TRANSPLANTING OF THE SEAGRASSES ZOSTERA MARINA AND 1 / 1 HALODULR MRIGHTII FOR..(U) ARMY ENGINEER NATERNAYS EXPERIMENT STATION VICKSBURG MS...11.8 un1.051.41. NAIOA SU ____ OFSTN .,.- 1 ,3 ....... ...... ENVIRONMENTAL IMPACT RESEARCH PROGRAM * Re TECHNICAL REPORT EL-85-9 N TRANSPLANTING OF THE

Eelgrass Blue Carbon-Quantification of Carbon Stocks and Sequestration Rates in Zostera Marina Beds in the Salish Sea

NASA Astrophysics Data System (ADS)

Lutz, M. D.; Rybczyk, J.; Poppe, K.; Johnson, C.; Kaminsky, M.; Lanphear, M.

2017-12-01

Seagrass meadows provide more than habitat, biodiversity support, wave abatement, and water quality improvement; they help mitigate climate change by taking up and storing (sequestering) carbon (C), reportedly at rates only surpassed worldwide by salt marsh and mangrove ecosystems. Now that their climate mitigation capacity has earned seagrass ecosystems a place in the Verified Carbon Standard voluntary greenhouse gas program, accurate ecosystem carbon accounting is essential. Though seagrasses vary in carbon storage and accumulation greatly across species and geography, the bulk of data included in calculating global averages involves tropical and subtropical seagrasses. We know little regarding carbon stocks nor sequestration rates for eelgrass (Zostera marina) meadows in the Pacific Northwest. The intent of our study was to quantify carbon stocks and sequestration rates in the central Salish Sea of Washington State. We gathered sediment cores over three bays, as close to 1 m in depth as possible, both on foot and while scuba diving. We measured bulk density, carbon concentration, carbon stock, grain size, and carbon accumulation rate with depth. Results from our study show lower estimated Corg concentration (mean = 0.39% C, SE=0.01, range=0.11-1.75, SE=0.01), Corg stock (mean=24.46 Mg ha-1, SE=0.00, range=16.31-49.99.70), and C sequestration rates (mean=33.96 g m-2yr-1, range=11.4-49.5) than those reported in published studies from most other locations. Zostera marina is highly productive, yet does not seem to have the capacity to store C in its sediments like seagrasses in warmer climes. These data have implications in carbon market trading, when determining appropriate seagrass restoration site dimensions to offset emissions from transportation, industry, and seagrass habitat disturbance. Awareness of lower rates could prevent underestimating the area appropriate for mitigation or restoration.

Baltic Sea Blue Carbon: Role of environmental factors influencing the carbon sink capacity of eelgrass (Zostera marina) meadows.

NASA Astrophysics Data System (ADS)

Röhr, E.; Holmer, M.; Boström, C.

2016-02-01

Although the global seagrass coverage area is less than 0.2 % of the worlds ocean floor, the carbon sink capacity of seagrasses may account up to 18 % of oceanic carbon burial and thus play a critical structural and functional role in many coastal ecosystems. Recent studies have shown considerable variation in the global estimates for seagrass meadow Corg accumulation rates and stocks, and indicate lack of understanding the factors influencing this variability. We sampled 20 eelgrass (Zostera marina) meadows in Finland and Denmark to study the variation in Corg accumulation rates and stocks within the Baltic Sea area. The study sites in both regions spanned a gradient from sheltered to exposed locations. The estimates for Corg accumulation rates at the Finnish eelgrass meadows were two orders of magnitude lower than the estimates for the Danish sites. The Corg stock integrated over the top 25 cm of sediment showed similar pattern, suggesting that the Finnish eelgrass meadows are carbon sources rather than carbon sinks, and the produced Corg is exported from the meadows. In contrast, at the Danish sites both Corg accumulation rates and areal Corg stock was more varying suggesting, that in this region the meadows function both as carbon sinks and sources. Our analysis further showed that a large percentage (> 55 %) of the variation in the Corg stocks was explained by sediment characteristics (density, fraction of silt and grain size distribution). In addition, the contribution of Zostera marina detritus to the sediment Corg pool explained >14 % of the variation in the Corg stocks. In order to get more reliable regional and global estimates of the role of seagrass meadows in the ocean carbon cycle, more studies accounting for the full range of environmental and species characteristics are urgently needed.

Potential effects of the invasive species Gracilaria vermiculophylla on Zostera marina metabolism and survival.

PubMed

Martínez-Lüscher, Johann; Holmer, Marianne

2010-06-01

The potential threat to seagrasses of the invasive algae, Gracilaria vermiculophylla was assessed through metabolic indicators under experimental conditions. Net leaf photosynthesis (LNP) and dark respiration (LDR) were measured from leaf segments of Zostera marina shoots under different loads of G. vermiculophylla (control, low 2.2kg FW m(-2) and high 4kg FW m(-2)) in mesocosm experiments separated in tanks at four temperatures (19, 23.5, 26 and 30 degrees C). LNP decreased in the presence of the high density G. vermiculophylla mat (25% on average), being the most severe reductions at 30 degrees C (35% less in high). LDR did not respond significantly to differences in algal biomass, whereas a progressive increase was found with increasing temperatures (3.4 times higher at 30 degrees C than at 19 degrees C). Sulphide in porewater was measured weekly in order clarify the role of sediment conditions on seagrass metabolism, and increased both with algal biomass (29% in high) and temperature (from 0.5mM at 26 degrees C to 2.6mM at 30 degrees C), but changes in LNP and LDR were not correlated with sulphide concentrations. Seagrass survival rates showed decreasing trend with algal biomass at all the temperatures (from 74% to 21% survival). G. vermiculophylla showed harmful effects on Z. marina metabolism and survival with synergistic effects of temperature suggesting greater impact of invasive species under future higher water temperatures.

Microbial communities in sediment from Zostera marina patches, but not the Z. marina leaf or root microbiomes, vary in relation to distance from patch edge

PubMed Central

Ettinger, Cassandra L.; Voerman, Sofie E.; Lang, Jenna M.; Stachowicz, John J.

2017-01-01

Background Zostera marina (also known as eelgrass) is a foundation species in coastal and marine ecosystems worldwide and is a model for studies of seagrasses (a paraphyletic group in the order Alismatales) that include all the known fully submerged marine angiosperms. In recent years, there has been a growing appreciation of the potential importance of the microbial communities (i.e., microbiomes) associated with various plant species. Here we report a study of variation in Z. marina microbiomes from a field site in Bodega Bay, CA. Methods We characterized and then compared the microbial communities of root, leaf and sediment samples (using 16S ribosomal RNA gene PCR and sequencing) and associated environmental parameters from the inside, edge and outside of a single subtidal Z. marina patch. Multiple comparative approaches were used to examine associations between microbiome features (e.g., diversity, taxonomic composition) and environmental parameters and to compare sample types and sites. Results Microbial communities differed significantly between sample types (root, leaf and sediment) and in sediments from different sites (inside, edge, outside). Carbon:Nitrogen ratio and eelgrass density were both significantly correlated to sediment community composition. Enrichment of certain taxonomic groups in each sample type was detected and analyzed in regard to possible functional implications (especially regarding sulfur metabolism). Discussion Our results are mostly consistent with prior work on seagrass associated microbiomes with a few differences and additional findings. From a functional point of view, the most significant finding is that many of the taxa that differ significantly between sample types and sites are closely related to ones commonly associated with various aspects of sulfur and nitrogen metabolism. Though not a traditional model organism, we believe that Z. marina can become a model for studies of marine plant-microbiome interactions. PMID

Cloning of TPS gene from eelgrass species Zostera marina and its functional identification by genetic transformation in rice.

PubMed

Zhao, Feng; Li, Qiuying; Weng, Manli; Wang, Xiuliang; Guo, Baotai; Wang, Li; Wang, Wei; Duan, Delin; Wang, Bin

2013-12-01

The full-length cDNA sequence (2613 bp) of the trehalose-6-phosphate synthase (TPS) gene of eelgrass Zostera marina (ZmTPS) was identified and cloned. Z. marina is a kind of seed-plant growing in sea water during its whole life history. The open reading frame (ORF) region of ZmTPS gene encodes a protein of 870 amino acid residues and a stop codon. The corresponding genomic DNA sequence is 3770 bp in length, which contains 3 exons and 2 introns. The ZmTPS gene was transformed into rice variety ZH11 via Agrobacterium-mediated transformation method. After antibiotic screening, molecular characterization, salt-tolerance and trehalose content determinations, two transgenic lines resistant to 150 mM NaCL solutions were screened. Our study results indicated that the ZmTPS gene was integrated into the genomic DNA of the two transgenic rice lines and could be expressed well. Moreover, the detection of the transformed ZmTPS gene in the progenies of the two transgenic lines was performed from T1 to T4 generations; and results suggested that the transformed ZmTPS gene can be transmitted from parent to the progeny in transgenic rice. © 2013.

Annual variation of biomass and photosynthesis in Zostera marina L. along the Pacific Coast of Baja California, Mexico

USGS Publications Warehouse

Cabello-Pasini, Alejandro; Munoz-Salazar, R.; Ward, D.H.

2003-01-01

Density, biomass, morphology, phenology and photosynthetic characteristics of Zostera marina were related to continuous measurements of in situ irradiance, attenuation coefficient and temperature at three coastal lagoons in Baja California, Mexico. In situ irradiance was approximately two-fold lower at San Quintin Bay (SQ) than at Ojo de Liebre Lagoon (OL) and San Ignacio Lagoon (SI). As a consequence of the greater irradiance plants at OL and SI were established 1 m deeper within the water column than those at SQ. At SQ, there was a four-fold variation in biomass of Z. marina caused by changes on shoot length and not shoot density, while at OL and SI biomass and shoot length did not fluctuate significantly throughout the year. Reproductive shoot density reached maximum values concomitantly with the greater irradiance during spring-summer, however, the density was approximately three-fold greater at SQ than at the southern coastal lagoons. While irradiance levels were two-fold greater at the southern lagoons, in general, photosynthetic characteristics were similar among all three lagoons. The hours of light saturated photosynthesis, calculated from their photosynthetic characteristics and irradiance measurements, suggest that photosynthesis of shoots from OL and SI are saturated for more than 6 h per day throughout the year, while shoots from SQ are likely light limited during approximately 15% of the year. Consequently, an increase in attenuation coefficient values in the water column will likely decrease light availability to Z. marina plants at SQ, potentially decreasing their survival.

Effects of anaerobiosis on in vivo protein synthesis in the roots of a marine angiosperm zostera marina

DOE Office of Scientific and Technical Information (OSTI.GOV)

Smith, R.D.; Alberte, R.S.

1989-04-01

The roots of the temperate seagrass Zostera marina undergo daily periods of anaerobiosis at night. These diurnal periods of anoxia alter many metabolic processes in the roots including carbon and nitrogen metabolism, amino acid synthesis, and synthesis and levels of ATP, ADP and AMP. To further characterize the effects of anaerobiosis, we determined in vivo rates of protein synthesis by measuring the relative incorporation of {sup 35}S-MET in TCA precipitated protein samples. Results from these studies show that in vivo protein synthesis decreases continuously during 12 h of anaerobiosis and correlates with changes in ATP levels under similar conditions. Furthermore,more » polypeptide patterns obtained by SDS-PAGE and 2D-SDSPAGE indicate that anaerobiosis leads to differential protein synthesis in the roots.« less

Annual variations of biomass and photosynthesis in Zostera marina at its southern end of distribution in the North Pacific

USGS Publications Warehouse

Cabello-Pasini, Alejandro; Munoz-Salazar, R.; Ward, D.H.

2003-01-01

Density, biomass, morphology, phenology and photosynthetic characteristics of Zostera marina were related to continuous measurements of in situ irradiance, attenuation coefficient and temperature at three coastal lagoons in Baja California, Mexico. In situ irradiance was approximately two-fold lower at San Quintin Bay (SQ) than at Ojo de Liebre Lagoon (OL) and San Ignacio Lagoon (SI). As a consequence of the greater irradiance, plants at OL and SI were established 1 m deeper within the water column than those at SQ. At SQ, there was a four-fold variation in biomass of Z. marina caused by changes on shoot length and not shoot density, while at OL and SI biomass and shoot length did not fluctuate significantly throughout the year. Reproductive shoot density reached maximum values concomitantly with the greatest irradiance during spring-summer, however, the density was approximately three-fold greater at SQ than at the southern coastal lagoons. While irradiance levels were two-fold greater at the southern lagoons, in general, photosynthetic characteristics were similar among all three lagoons. The hours of light saturated photosynthesis, calculated from their photosynthetic characteristics and irradiance measurements, suggest that photosynthesis of shoots from OL and SI are saturated for more than 6 h per day throughout the year, while shoots from SQ are likely light limited during approximately 15% of the year. Consequently, an increase in attenuation coefficient values in the water column will likely decrease light availability to Z. marina plants at SQ, potentially decreasing their survival. ?? 2003 Elsevier Science B.V. All rights reserved.

Genetic characterization of Zostera asiatica on the Pacific Coast of North America

USGS Publications Warehouse

Talbot, S.L.; Wyllie-Echeverria, S.; Ward, D.H.; Rearick, J.R.; Sage, G.K.; Chesney, B.; Phillips, R.C.

2006-01-01

We gathered sequence information from the nuclear 5.8S rDNA gene and associated internal transcribed spacers, ITS-1 and ITS-2 (5.8S rDNA/ITS), and the chloroplast maturase K (matK) gene, from Zostera samples collected from subtidal habitats in Monterey and Santa Barbara (Isla Vista) bays, California, to test the hypothesis that these plants are conspecific with Z. asiatica Miki of Asia. Sequences from approximately 520 base pairs of the nuclear 5.8S rDNA/ITS obtained from the subtidal Monterey and Isla Vista Zostera samples were identical to homologous sequences obtained from Z. marina collected from intertidal habitats in Japan, Alaska, Oregon and California. Similarly, sequences from the matK gene from the subtidal Zostera samples were identical to matK sequences obtained from Z. marina collected from intertidal habitats in Japan, Alaska, Oregon and California, but differed from Z. asiatica sequences accessioned into GenBank. This suggests the subtidal plants are conspecific with Z. marina, not Z. asiatica. However, we found that herbarium samples accessioned into the Kyoto University Herbarium, determined to be Z. asiatica, yielded 5.8S rDNA/ITS sequences consistent with either Z. japonica, in two cases, or Z. marina, in one case. Similar results were observed for the chloroplast matK gene; we found haplotypes that were inconsistent with published matK sequences from Z. asiatica collected from Japan. These results underscore the need for closer examination of the relationship between Z. marina along the Pacific Coast of North America, and Z. asiatica of Asia, for the retention and verification of specimens examined in scientific studies, and for assessment of the usefulness of morphological characters in the determination of taxonomic relationships within Zosteraceae.

The impact of the herbicide atrazine on growth and photosynthesis of seagrass, Zostera marina (L.), seedlings.

PubMed

Gao, Yaping; Fang, Jianguang; Zhang, Jihong; Ren, Lihua; Mao, Yuze; Li, Bin; Zhang, Mingliang; Liu, Dinghai; Du, Meirong

2011-08-01

The impact of the widely used herbicide atrazine on seedling growth and photosynthesis of eelgrass was determined. The long-term impact of the herbicide atrazine (1, 10 and 100 μg/L) on growth of eelgrass Zostera marina (L.) seedlings, maintained in outdoor aquaria, was monitored over 4 weeks. Exposure to 10 μg/L atrazine resulted in significantly lower plant fresh weight and total chlorophyll concentration and up to 86.67% mortality at the 100 μg/L concentration. Short-term photosynthetic stress on eelgrass seedlings was determined and compared with adult eelgrass using chlorophyll fluorescence. The effective quantum yield in eelgrass seedlings was significantly depressed at all atrazine concentrations (2, 4, 8, 16, 32 and 64 μg/L) even within 2 h and remained at a lower level than for adult plants for each concentration. These results indicate that atrazine presents a potential threat to seagrass seedling functioning and that the impact is much higher than for adult plants. Crown Copyright © 2011. Published by Elsevier Ltd. All rights reserved.

Sexual Recruitment in Zostera marina: Progress toward a Predictive Model.

PubMed

Furman, Bradley T; Peterson, Bradley J

2015-01-01

Ecophysiological stress and physical disturbance are capable of structuring meadows through a combination of direct biomass removal and recruitment limitation; however, predicting these effects at landscape scales has rarely been successful. To model environmental influence on sexual recruitment in perennial Zostera marina, we selected a sub-tidal, light-replete study site with seasonal extremes in temperature and wave energy. During an 8-year observation period, areal coverage increased from 4.8 to 42.7%. Gains were stepwise in pattern, attributable to annual recruitment of patches followed by centrifugal growth and coalescence. Recruitment varied from 13 to 4,894 patches per year. Using a multiple linear regression approach, we examined the association between patch appearance and relative wave energy, atmospheric condition and water temperature. Two models were developed, one appropriate for the dispersal of naked seeds, and another for rafted flowers. Results indicated that both modes of sexual recruitment varied as functions of wind, temperature, rainfall and wave energy, with a regime shift in wind-wave energy corresponding to periods of rapid colonization within our site. Temporal correlations between sexual recruitment and time-lagged climatic summaries highlighted floral induction, seed bank and small patch development as periods of vulnerability. Given global losses in seagrass coverage, regions of recovery and re-colonization will become increasingly important. Lacking landscape-scale process models for seagrass recruitment, temporally explicit statistical approaches presented here could be used to forecast colonization trajectories and to provide managers with real-time estimates of future meadow performance; i.e., when to expect a good year in terms of seagrass expansion. To facilitate use as forecasting tools, we did not use statistical composites or normalized variables as our predictors. This study, therefore, represents a first step toward linking

Sexual Recruitment in Zostera marina: Progress toward a Predictive Model

PubMed Central

2015-01-01

Ecophysiological stress and physical disturbance are capable of structuring meadows through a combination of direct biomass removal and recruitment limitation; however, predicting these effects at landscape scales has rarely been successful. To model environmental influence on sexual recruitment in perennial Zostera marina, we selected a sub-tidal, light-replete study site with seasonal extremes in temperature and wave energy. During an 8-year observation period, areal coverage increased from 4.8 to 42.7%. Gains were stepwise in pattern, attributable to annual recruitment of patches followed by centrifugal growth and coalescence. Recruitment varied from 13 to 4,894 patches per year. Using a multiple linear regression approach, we examined the association between patch appearance and relative wave energy, atmospheric condition and water temperature. Two models were developed, one appropriate for the dispersal of naked seeds, and another for rafted flowers. Results indicated that both modes of sexual recruitment varied as functions of wind, temperature, rainfall and wave energy, with a regime shift in wind-wave energy corresponding to periods of rapid colonization within our site. Temporal correlations between sexual recruitment and time-lagged climatic summaries highlighted floral induction, seed bank and small patch development as periods of vulnerability. Given global losses in seagrass coverage, regions of recovery and re-colonization will become increasingly important. Lacking landscape-scale process models for seagrass recruitment, temporally explicit statistical approaches presented here could be used to forecast colonization trajectories and to provide managers with real-time estimates of future meadow performance; i.e., when to expect a good year in terms of seagrass expansion. To facilitate use as forecasting tools, we did not use statistical composites or normalized variables as our predictors. This study, therefore, represents a first step toward linking

Conservation of Eelgrass (Zostera marina) Genetic Diversity in a Mesocosm-Based Restoration Experiment

PubMed Central

Ort, Brian S.; Cohen, C. Sarah; Boyer, Katharyn E.; Reynolds, Laura K.; Tam, Sheh May; Wyllie-Echeverria, Sandy

2014-01-01

Eelgrass (Zostera marina) forms the foundation of an important shallow coastal community in protected estuaries and bays. Widespread population declines have stimulated restoration efforts, but these have often overlooked the importance of maintaining the evolutionary potential of restored populations by minimizing the reduction in genetic diversity that typically accompanies restoration. In an experiment simulating a small-scale restoration, we tested the effectiveness of a buoy-deployed seeding technique to maintain genetic diversity comparable to the seed source populations. Seeds from three extant source populations in San Francisco Bay were introduced into eighteen flow-through baywater mesocosms. Following seedling establishment, we used seven polymorphic microsatellite loci to compare genetic diversity indices from 128 shoots to those found in the source populations. Importantly, allelic richness and expected heterozygosity were not significantly reduced in the mesocosms, which also preserved the strong population differentiation present among source populations. However, the inbreeding coefficient F IS was elevated in two of the three sets of mesocosms when they were grouped according to their source population. This is probably a Wahlund effect from confining all half-siblings within each spathe to a single mesocosm, elevating F IS when the mesocosms were considered together. The conservation of most alleles and preservation of expected heterozygosity suggests that this seeding technique is an improvement over whole-shoot transplantation in the conservation of genetic diversity in eelgrass restoration efforts. PMID:24586683

Conservation of eelgrass (Zostera marina) genetic diversity in a mesocosm-based restoration experiment.

PubMed

Ort, Brian S; Cohen, C Sarah; Boyer, Katharyn E; Reynolds, Laura K; Tam, Sheh May; Wyllie-Echeverria, Sandy

2014-01-01

Eelgrass (Zostera marina) forms the foundation of an important shallow coastal community in protected estuaries and bays. Widespread population declines have stimulated restoration efforts, but these have often overlooked the importance of maintaining the evolutionary potential of restored populations by minimizing the reduction in genetic diversity that typically accompanies restoration. In an experiment simulating a small-scale restoration, we tested the effectiveness of a buoy-deployed seeding technique to maintain genetic diversity comparable to the seed source populations. Seeds from three extant source populations in San Francisco Bay were introduced into eighteen flow-through baywater mesocosms. Following seedling establishment, we used seven polymorphic microsatellite loci to compare genetic diversity indices from 128 shoots to those found in the source populations. Importantly, allelic richness and expected heterozygosity were not significantly reduced in the mesocosms, which also preserved the strong population differentiation present among source populations. However, the inbreeding coefficient F IS was elevated in two of the three sets of mesocosms when they were grouped according to their source population. This is probably a Wahlund effect from confining all half-siblings within each spathe to a single mesocosm, elevating F IS when the mesocosms were considered together. The conservation of most alleles and preservation of expected heterozygosity suggests that this seeding technique is an improvement over whole-shoot transplantation in the conservation of genetic diversity in eelgrass restoration efforts.

Restoring Resiliency: Case Studies from Pacific Northwest Estuarine Eelgrass (Zostera marina L.) Ecosystems

DOE Office of Scientific and Technical Information (OSTI.GOV)

Thom, Ronald M.; Diefenderfer, Heida L.; Vavrinec, John

2012-01-01

The purpose of many ecological restoration projects is to establish an ecosystem with fully developed structure and function that exhibits resistance to and resilience from disturbances. Coastal restoration projects in the Pacific Northwest provide opportunities to understand what is required to restore the resilience of eelgrass (Zostera marina L.) populations. Factors influencing resilience observed in three case studies of eelgrass restoration include minimum viable population, adaptations of transplant populations, and natural and anthropogenic disturbances at restoration sites. The evaluation of resiliency depends on selecting appropriate monitoring metrics and the frequency and duration of monitoring. Eelgrass area, cover and shoot densitymore » provide useful and reliable metrics for quantifying resilience of restored meadows. Further, five years of monitoring of these metrics provides data that can reasonably predict the long-term viability of a planted plot. Eelgrass appears to be a resilient ecosystem in general, though one that data suggest may exhibit tipping points brought about by compounded environmental conditions outside of its tolerance ranges. Explicit inclusion of resilience in the planning and practice of habitat restoration may reduce uncertainties and improve the performance of restored systems by increasing buffering capacity, nurturing sources of renewal (e.g., seeds and rhizomes), and managing for habitat forming and maintaining processes (e.g., sediment dynamics) at multiple scales.« less

Sodium-dependent nitrate transport at the plasma membrane of leaf cells of the marine higher plant Zostera marina L.

PubMed

García-Sánchez, M J; Jaime, M P; Ramos, A; Sanders, D; Fernández, J A

2000-03-01

NO(3)(-) is present at micromolar concentrations in seawater and must be absorbed by marine plants against a steep electrochemical potential difference across the plasma membrane. We studied NO(3)(-) transport in the marine angiosperm Zostera marina L. to address the question of how NO(3)(-) uptake is energized. Electrophysiological studies demonstrated that micromolar concentrations of NO(3)(-) induced depolarizations of the plasma membrane of leaf cells. Depolarizations showed saturation kinetics (K(m) = 2.31 +/- 0.78 microM NO(3)(-)) and were enhanced in alkaline conditions. The addition of NO(3)(-) did not affect the membrane potential in the absence of Na(+), but depolarizations were restored when Na(+) was resupplied. NO(3)(-)-induced depolarizations at increasing Na(+) concentrations showed saturation kinetics (K(m) = 0.72 +/- 0.18 mM Na(+)). Monensin, an ionophore that dissipates the Na(+) electrochemical potential, inhibited NO(3)(-)-evoked depolarizations by 85%, and NO(3)(-) uptake (measured by depletion from the external medium) was stimulated by Na(+) ions and by light. Our results strongly suggest that NO(3)(-) uptake in Z. marina is mediated by a high-affinity Na(+)-symport system, which is described here (for the first time to our knowledge) in an angiosperm. Coupling the uptake of NO(3)(-) to that of Na(+) enables the steep inwardly-directed electrochemical potential for Na(+) to drive net accumulation of NO(3)(-) within leaf cells.

Temperature trumps light: Teasing apart interactive factors controlling non-indigenous Zostera japonica growth

EPA Science Inventory

In the Pacific Northwest Zostera marina and Z. japonica co-exist by occupying separate elevation niches. We conducted two mesocosm experiments to evaluate light and temperature as factors controlling the disjunct distribution of congeners. The first study tests the hypothesis t...

Identification of light-harvesting chlorophyll a/b-binding protein genes of Zostera marina L. and their expression under different environmental conditions

NASA Astrophysics Data System (ADS)

Kong, Fanna; Zhou, Yang; Sun, Peipei; Cao, Min; Li, Hong; Mao, Yunxiang

2016-02-01

Photosynthesis includes the collection of light and the transfer of solar energy using light-harvesting chlorophyll a/b-binding (LHC) proteins. In high plants, the LHC gene family includes LHCA and LHCB sub-families, which encode proteins constituting the light-harvesting complex of photosystems I and II. Zostera marina L. is a monocotyledonous angiosperm and inhabits submerged marine environments rather than land environments. We characterized the Lhca and Lhcb gene families of Z. marina from the expressed sequence tags (EST) database. In total, 13 unigenes were annotated as ZmLhc, 6 in Lhca family and 7 in ZmLhcb family. ZmLHCA and ZmLHCB contained the conservative LHC motifs and amino acid residues binding chlorophyll. The average similarity among mature ZmLHCA and ZmLHCB was 48.91% and 48.66%, respectively, which indicated a high degree of divergence within ZmLHChc gene family. The reconstructed phylogenetic tree showed that the tree topology and phylogenetic relationship were similar to those reported in other high plants, suggesting that the Lhc genes were highly conservative and the classification of ZmLhc genes was consistent with the evolutionary position of Z. marina. Real-time reverse transcription (RT) PCR analysis showed that different members of ZmLhca and ZmLhcb responded to a stress in different expression patterns. Salinity, temperature, light intensity and light quality may affect the expression of most ZmLhca and ZmLhcb genes. Inorganic carbon concentration and acidity had no obvious effect on ZmLhca and ZmLhcb gene expression, except for ZmLhca6.

Long-Term Field Study Reveals Subtle Effects of the Invasive Alga Sargassum muticum upon the Epibiota of Zostera marina.

PubMed

DeAmicis, Stacey; Foggo, Andrew

2015-01-01

Invasive species can alter coastal ecosystems both directly, e.g. through competition for substratum and nutrients, and indirectly. Indirect effects may be mediated by creation of dissimilar or inimical habitats, changes in predator and/or prey assemblages, alterations in associated biota, and perturbations of water movement and thermal regimes. Previous studies have shown that invasive algae can modify native habitat architecture, disrupt intricately linked food webs and alter epibiotic assemblages. In the UK, the seagrass Zostera marina supports a diverse epibiotic assemblage, influencing key factors such as sediment dynamics, depositional regime and trophic linkages. Increasing encroachment of the invasive alga Sargassum muticum into seagrass meadows changes the physical and chemical characteristics of the local environment and creates the potential for changes in the epibionts associated with the seagrass blades, threatening the integrity of the seagrass ecosystem. We investigated the effects of S. muticum invasion upon the epibiota of Z. marina in a drowned river valley in SW England seasonally from spring to autumn over four years in an in-situ manipulative experiment, comparing permanent quadrats with and without artificially introduced S. muticum. Epibiota were weighed, identified to the most detailed operational taxonomic unit (OTU) possible, and unitary organisms were enumerated. Multivariate PERMANOVA+ analysis revealed significant differences in epibiont assemblages between Sargassum treatments. Linear mixed effects models indicated that differences in epibiota assemblage composition were not reflected as significant differences in mean biomass per sample, or number of epibiont OTUs per sample. We conclude that S. muticum invasion into Z. marina meadows may significantly alter the species composition and abundance distribution of epibiotic assemblages found on the blades of the seagrass. Thus S. muticum invasion could have more wide-reaching effects on

Nanoparticle-based measurements of pH and O2 dynamics in the rhizosphere of Zostera marina L.: effects of temperature elevation and light-dark transitions.

PubMed

Elgetti Brodersen, Kasper; Koren, Klaus; Lichtenberg, Mads; Kühl, Michael

2016-07-01

Seagrasses can modulate the geochemical conditions in their immediate rhizosphere through the release of chemical compounds from their below-ground tissue. This is a vital chemical defence mechanism, whereby the plants detoxify the surrounding sediment. Using novel nanoparticle-based optical O2 and pH sensors incorporated in reduced and transparent artificial sediment, we investigated the spatio-temporal dynamics of pH and O2 within the entire rhizosphere of Zostera marina L. during experimental manipulations of light and temperature. We combined such measurements with O2 microsensor measurements of the photosynthetic productivity and respiration of seagrass leaves. We found pronounced pH and O2 microheterogeneity within the immediate rhizosphere of Z. marina, with higher below-ground tissue oxidation capability and rhizoplane pH levels during both light exposure of the leaf canopy and elevated temperature, where the temperature-mediated stimuli of biogeochemical processes seemed to predominate. Low rhizosphere pH microenvironments appeared to correlate with plant-derived oxic microzones stimulating local sulphide oxidation and thus driving local proton generation, although the rhizoplane pH levels generally where much higher than the bulk sediment pH. Our data show that Z. marina can actively alter its rhizosphere pH microenvironment alleviating the local H2 S toxicity and enhancing nutrient availability in the adjacent sediment via geochemical speciation shift. © 2016 John Wiley & Sons Ltd.

Duration of Temperature exposure controls growth of Zostera japonica: implications for zonation and colonization

EPA Science Inventory

At least two seagrass congeners in the genus Zostera are found along the Pacific Coast of North America: native Z. marina L. and the non-native Z. japonica Aschers. & Graebn. Efforts to understand the drivers behind the expanding colonization of Z. japonica have led to interest ...

Diel and seasonal variation of a molluscan taxocoenosis associated with a Zostera marina bed in southern Spain (Alboran Sea)

NASA Astrophysics Data System (ADS)

Rueda, Jose L.; Urra, Javier; Salas, Carmen

2008-09-01

The diel and seasonal variation of molluscs living in a Zostera marina bed (12-14 m depth) from southern Spain have been studied for one year using a small Agassiz trawl for collecting the samples (222 m2). The frequent and dominant species were very similar in both diurnal and nocturnal samples, including mainly gastropods such as Jujubinus striatus, Nassarius pygmaeus, Mitrella minor, Calliostoma planatum, Rissoa membranacea or Smaragdia viridis. Nevertheless, a significant increase of abundance of scavengers (e.g. Nassarius spp.) and carnivores (e.g. cephalopods) was registered in nocturnal samples. The abundance was maximal in spring and summer in diurnal and nocturnal samples and also in autumn for nocturnal ones, displaying significantly higher values in nocturnal samples. The species richness, diversity and evenness displayed a similar seasonal trend for diurnal and nocturnal samples, with maximum values during summer months. Monthly variation of the molluscan composition (species presence-absence data) was more acute than diel variation, according to the Cluster, MDS and ANOSIM results. Nevertheless, both monthly and diel changes in the structure (species abundance data) of the molluscan taxocoenosis were important throughout the year. Diel changes in the structure of the molluscan fauna are related to an increase of abundance of some species at nighttime due to vertical movements from the sediment to the shoots or along them (e.g. J. striatus, Nassarius spp.) or due to horizontal movements from adjacent habitats (e.g. cephalopods). Nevertheless, some species such as Rissoa spp. or Bittium spp. stay on the leaves of Z. marina during day as well as nighttime.

Factors Influencing Spatial and Annual Variability in Eelgrass (Zostera marina L.) Meadows in Willapa Bay, Washington, and Coos Bay, Oregon, Estuaries

DOE Office of Scientific and Technical Information (OSTI.GOV)

Thom, Ronald M.; Borde, Amy B.; Rumrill, Steven

2003-08-01

Environmental factors that influence annual variability and spatial differences in eelgrass meadows (Zostera marina L.) were examined within Willapa Bay, WA, and Coos Bay, OR, over a period of 4 years (1998-2001). A suite of eelgrass metrics were recorded annually at field sites that spanned the estuarine gradient from the marine-dominated to mesohaline regions. Growth of eelgrass plants was also monitored on a monthly basis within Sequim Bay, WA. Both the spatial cover and density of Z. marina were positively correlated with estuarine salinity and inversely correlated with temperature of the tideflat sediment. Experimental evidence verified that optimal eelgrass growthmore » occurred at highest salinities and relatively low temperatures. Eelgrass density, biomass, and the incident of flowering plants all increased substantially in Willapa Bay, and less so in Coos Bay, over the duration of the study. Warmer winters and cooler summers associated with the transition from El Ni?o to La Ni?a ocean conditions during the study period were correlated with the increase in eelgrass abundance and flowering. Anthropogenic factors (e.g., disturbance and erosion by vessel wakes and recreational shellfishing activities) may have contributed to spatial variability. Our findings indicate that large-scale changes in climate and nearshore ocean conditions can exert a strong regional influence on eelgrass abundance, which can vary annually by as much as 700% in Willapa Bay. Lower levels of variability observed in Coos Bay may be due to the stronger and more direct influence of the nearshore Pacific Ocean. We conclude that climate variation may have profound effects on the abundance and distribution of eelgrass meadows throughout the Pacific Northwest, and we anticipate that ocean conditions will emerge as a primary driving force for living estuarine resources and ecological processes that are associated with Z. marina beds within the landscape of these estuarine tidal basins.« less

Phylogeographic differentiation versus transcriptomic adaptation to warm temperatures in Zostera marina, a globally important seagrass.

PubMed

Jueterbock, A; Franssen, S U; Bergmann, N; Gu, J; Coyer, J A; Reusch, T B H; Bornberg-Bauer, E; Olsen, J L

2016-11-01

Populations distributed across a broad thermal cline are instrumental in addressing adaptation to increasing temperatures under global warming. Using a space-for-time substitution design, we tested for parallel adaptation to warm temperatures along two independent thermal clines in Zostera marina, the most widely distributed seagrass in the temperate Northern Hemisphere. A North-South pair of populations was sampled along the European and North American coasts and exposed to a simulated heatwave in a common-garden mesocosm. Transcriptomic responses under control, heat stress and recovery were recorded in 99 RNAseq libraries with ~13 000 uniquely annotated, expressed genes. We corrected for phylogenetic differentiation among populations to discriminate neutral from adaptive differentiation. The two southern populations recovered faster from heat stress and showed parallel transcriptomic differentiation, as compared with northern populations. Among 2389 differentially expressed genes, 21 exceeded neutral expectations and were likely involved in parallel adaptation to warm temperatures. However, the strongest differentiation following phylogenetic correction was between the three Atlantic populations and the Mediterranean population with 128 of 4711 differentially expressed genes exceeding neutral expectations. Although adaptation to warm temperatures is expected to reduce sensitivity to heatwaves, the continued resistance of seagrass to further anthropogenic stresses may be impaired by heat-induced downregulation of genes related to photosynthesis, pathogen defence and stress tolerance. © 2016 John Wiley & Sons Ltd.

Influence of Zostera marina canopies on unidirectional flow, hydraulic roughness and sediment movement

NASA Astrophysics Data System (ADS)

Lefebvre, A.; Thompson, C. E. L.; Amos, C. L.

2010-09-01

Seagrasses develop extensive or patchy underwater meadows in coastal areas around the world, forming complex, highly productive ecosystems. Seagrass canopies exert strong effects on water flow inside and around them, thereby affecting flow structure, sediment transport and benthic ecology. The influence of Zostera marina canopies on flow velocity, turbulence, hydraulic roughness and sediment movement was evaluated through laboratory experiments in 2 flumes and using live Z. marina and a mobile sand bed. Profiles of instantaneous velocities were measured and sediment movement was identified upstream, within and downstream of patches of different sizes and shoot density and at different free-stream velocities. Flow structure was characterised by time-averaged velocity, turbulence intensity and Turbulent Kinetic Energy (TKE). When velocity data were available above the canopy, they were fitted to the Law of the Wall and shear velocities and roughness lengths were calculated. When a seagrass canopy was present, three layers were distinguishable in the water column: (1) within canopy represented by low velocities and high turbulence; (2) transition zone around the height of the canopy, where velocities increased, turbulence decreased and TKE was high; and (3) above canopy where velocities were equal or higher than free-stream velocities and turbulence and TKE were lower than below. Shoot density and patch-width influenced this partitioning of the flow when the canopy was long enough (based on flume experiments, at least more than 1 m-long). The enhanced TKE observed at the canopy/water interface suggests that large-scale turbulence is generated at the canopy surface. These oscillations, likely to be related to the canopy undulations, are then broken down within the canopy and high-frequency turbulence takes place near the bed. This turbulence 'cascade' through the canopy may have an important impact on biogeochemical processes. The velocity above the canopy generally

An examination of photoacclimatory responses of Zostera marina transplants along a depth gradient for transplant-site selection in a disturbed estuary

NASA Astrophysics Data System (ADS)

Li, Wen-Tao; Kim, Seung Hyeon; Kim, Jae Woo; Kim, Jong-Hyeob; Lee, Kun-Seop

2013-02-01

Growth and photosynthetic responses of Zostera marina transplants along a depth gradient were examined to determine appropriate transplanting areas for seagrass restoration. Seagrass Z. marina was once widely distributed in the Taehwa River estuary in southeastern Korea, but has disappeared since the 1960s due to port construction and large scale pollutant inputs from upstream industrial areas. Recently, water quality has been considerably improved as a result of effective sewage treatment, and the local government is attempting to restore Z. marina to the estuary. For seagrass restoration in this estuary, a pilot transplantation trial of Z. marina at three water depths (shallow: 0.5 m; intermediate: 1.5 m; deep: 2.5 m relative to MLLW) was conducted in November 2008. The transplant shoot density increased gradually at the intermediate and deep sites, whereas the transplants at the shallow site disappeared after 3 months. To find the optimal transplantation locations in this estuary, the growth and photosynthetic responses of the transplants along a depth gradient were examined for approximately 4 months following transplantation in March 2009. In the 2009 experimental transplantation trial, shoot density of transplants at the shallow site was significantly higher than those at the intermediate and deep sites during the first 3 months following transplantation, but rapidly decreased approximately 4 months after transplantation. The chlorophyll content, photosynthetic efficiency (α), and maximum quantum yield (Fv/Fm) of the transplants were significantly higher at the deep site than at the shallow site. Shoot size, biomass and leaf productivity were also significantly higher at the deep site than at the shallow site. Although underwater irradiance was significantly lower at the deep site than at the shallow site, transplants at the deep site were morphologically and physiologically acclimated to the low light. Transplants at the shallow site exhibited high

Estuarine intertidal sediment temperature variability in Zoster marina and Z. japonica habitats in Yaquina Bay, Oregon

EPA Science Inventory

Physical characterization of intertidal estuarine plant habitats over time may reveal distribution-limiting thresholds. Temperature data from loggers embedded in sediment in transects crossing Zostera marina and Z. japonica habitats in lower Yaquina Bay, Oregon display signific...

Establishing a baseline for regional scale monitoring of eelgrass (Zostera marina) habitat on the lower Alaska Peninsula

USGS Publications Warehouse

Hogrefe, Kyle R.; Ward, David H.; Donnelly, Tyrone F.; Dau, Niels

2014-01-01

Seagrass meadows, one of the world’s most widespread and productive ecosystems, provide a wide range of services with real economic value. Worldwide declines in the distribution and abundance of seagrasses and increased threats to coastal ecosystems from climate change have prompted a need to acquire baseline data for monitoring and protecting these important habitats. We assessed the distribution and abundance of eelgrass (Zostera marina) along nearly 1200 km of shoreline on the lower Alaska Peninsula, a region of expansive eelgrass meadows whose status and trends are poorly understood. We demonstrate the effectiveness of a multi-scale approach by using Landsat satellite imagery to map the total areal extent of eelgrass while integrating field survey data to improve map accuracy and describe the physical and biological condition of the meadows. Innovative use of proven methods and processing tools was used to address challenges inherent to remote sensing in high latitude, coastal environments. Eelgrass was estimated to cover ~31,000 ha, 91% of submerged aquatic vegetation on the lower Alaska Peninsula, nearly doubling the known spatial extent of eelgrass in the region. Mapping accuracy was 80%–90% for eelgrass distribution at locations containing adequate field survey data for error analysis.

[Growth adaptability of Zostera marina at different habitats of the Swan Lake in Rongcheng, China].

PubMed

Guo, Mei Yu; Li, Wen Tao; Yang, Xiao Long; Zhang, Xiu Mei; Liu, Jian Ying; Li, Chang Jun

2017-05-18

Eelgrass (Zostera marina), a seagrass species widely distributed in the coastal regions of northern hemisphere, has suffered with a great decline due to a variety of anthropogenic and environmental stresses. In order to examine the adaptability of eelgrass to different environmental stresses, studies on the morphology and reproductive capacity of eelgrass had been carried out monthly from November 2014 to October 2015 at four different habitats of the Swan Lake, including patch area inintertidal area and subtidal area, eelgrass meadow edge, and eelgrass meadow area. The results showed significant spatio-temporal variations in the morphological parameters and branch frequency of eelgrass shoots at different habitats of the Swan Lake. The highest values of leaf length, leaf width, aboveground/belowground biomass, and internode length/diameter were observed in the meadow area, i.e., 78.54 cm, 7.93 mm, 7.03 and 3.88, respectively, while the highest branch frequency was observed in the meadow edge (88.4%). The plasticity index for aboveground/belowground biomass was higher (ranging from 0.77 to 0.92) at the four habitats, but those for the leaf width was slightly lower (ranging from 0.41 to 0.64). The number of spathes in each shoot showed no significant difference at different habitats, whereas the number of spathes per unit area was significantly different. Clonal reproduction was more dominant in meadow area than in the patch area where human disturbance was high.

Multiple stressors threaten the imperiled coastal foundation species eelgrass (Zostera marina) in Chesapeake Bay, USA.

PubMed

Lefcheck, Jonathan S; Wilcox, David J; Murphy, Rebecca R; Marion, Scott R; Orth, Robert J

2017-09-01

Interactions among global change stressors and their effects at large scales are often proposed, but seldom evaluated. This situation is primarily due to lack of comprehensive, sufficiently long-term, and spatially extensive datasets. Seagrasses, which provide nursery habitat, improve water quality, and constitute a globally important carbon sink, are among the most vulnerable habitats on the planet. Here, we unite 31 years of high-resolution aerial monitoring and water quality data to elucidate the patterns and drivers of eelgrass (Zostera marina) abundance in Chesapeake Bay, USA, one of the largest and most valuable estuaries in the world, with an unparalleled history of regulatory efforts. We show that eelgrass area has declined 29% in total since 1991, with wide-ranging and severe ecological and economic consequences. We go on to identify an interaction between decreasing water clarity and warming temperatures as the primary drivers of this trend. Declining clarity has gradually reduced eelgrass cover the past two decades, primarily in deeper beds where light is already limiting. In shallow beds, however, reduced visibility exacerbates the physiological stress of acute warming, leading to recent instances of decline approaching 80%. While degraded water quality has long been known to influence underwater grasses worldwide, we demonstrate a clear and rapidly emerging interaction with climate change. We highlight the urgent need to integrate a broader perspective into local water quality management, in the Chesapeake Bay and in the many other coastal systems facing similar stressors. © 2017 John Wiley & Sons Ltd.

An Experimental Comparison of the Effects of Zostera marina and Zostera japonica on the Diurnal Variability of the Carbonate System in the Context of a Pacific Northwest Estuary

NASA Astrophysics Data System (ADS)

Miller, C.; Love, B. A.; Yang, S.

2016-02-01

Atmospheric CO2 emissions are being absorbed at an unprecedented rate by the global and coastal oceans, shifting the baseline pCO2, and inducing anthropogenic ocean acidification (OA). Recent studies have highlighted the potential benefits of near-shore vegetated habitats, such as seagrass beds as carbon sinks, potentially mitigating the effects of OA for vulnerable calcifying organisms. Seagrasses are capable of raising seawater pH and CaCO3 saturation state during times of high photosynthetic activity; however, the converse occurs during periods of dark respiration, resulting in a cyclical pattern of high and low pH and saturation state. A better understanding of diurnal seagrass induced carbonate system variability is needed to determine whether seagrass beds act as refugia from OA, and if individual species differentially affect the carbonate system. We conducted experiments to compare the effects of the native Zostera marina and non-native Zostera japonica on the carbonate system. Leaf clippings were incubated at five different light intensities (including dark) and pCO2 levels, representing the range of light and pCO2 in a given day. Induced changes in dissolved inorganic carbon (DIC) via photosynthesis and respiration were measured as well as pH and alkalinity. As irradiance and concentration of bio-available inorganic carbon are the two main drivers of photosynthetic activity, our measurements of the short-term response of photosynthesis to a spectrum of pCO2 and irradiance intensity can predict the diurnal fluctuation of pH and DIC for both species. This lab study provides a mechanistic background for building complex models based on field monitoring of carbonate chemistry in seagrass communities by comparing and integrating our results with in situ measurements. Interpretation of our findings will be placed in the context of short-term seagrass response to the spatiotemporal variability of pCO2 with respect to the progression of ocean acidification.

Population genetic structure of eelgrass (Zostera marina) on the Korean coast: Current status and conservation implications for future management

PubMed Central

Kim, Jae Hwan; Kang, Ji Hyoun; Jang, Ji Eun; Choi, Sun Kyeong; Kim, Min Ji; Park, Sang Rul; Lee, Hyuk Je

2017-01-01

Seagrasses provide numerous ecosystem services for coastal and estuarine environments, such as nursery functions, erosion protection, pollution filtration, and carbon sequestration. Zostera marina (common name “eelgrass”) is one of the seagrass bed-forming species distributed widely in the northern hemisphere, including the Korean Peninsula. Recently, however, there has been a drastic decline in the population size of Z. marina worldwide, including Korea. We examined the current population genetic status of this species on the southern coast of Korea by estimating the levels of genetic diversity and genetic structure of 10 geographic populations using eight nuclear microsatellite markers. The level of genetic diversity was found to be significantly lower for populations on Jeju Island [mean allelic richness (AR) = 1.92, clonal diversity (R) = 0.51], which is located approximately 155 km off the southernmost region of the Korean Peninsula, than for those in the South Sea (mean AR = 2.69, R = 0.82), which is on the southern coast of the mainland. South Korean eelgrass populations were substantially genetically divergent from one another (FST = 0.061–0.573), suggesting that limited contemporary gene flow has been taking place among populations. We also found weak but detectable temporal variation in genetic structure within a site over 10 years. In additional depth comparisons, statistically significant genetic differentiation was observed between shallow (or middle) and deep zones in two of three sites tested. Depleted genetic diversity, small effective population sizes (Ne) and limited connectivity for populations on Jeju Island indicate that these populations may be vulnerable to local extinction under changing environmental conditions, especially given that Jeju Island is one of the fastest warming regions around the world. Overall, our work will inform conservation and restoration efforts, including transplantation for eelgrass populations at the southern

Population genetic structure of eelgrass (Zostera marina) on the Korean coast: Current status and conservation implications for future management.

PubMed

Kim, Jae Hwan; Kang, Ji Hyoun; Jang, Ji Eun; Choi, Sun Kyeong; Kim, Min Ji; Park, Sang Rul; Lee, Hyuk Je

2017-01-01

Seagrasses provide numerous ecosystem services for coastal and estuarine environments, such as nursery functions, erosion protection, pollution filtration, and carbon sequestration. Zostera marina (common name "eelgrass") is one of the seagrass bed-forming species distributed widely in the northern hemisphere, including the Korean Peninsula. Recently, however, there has been a drastic decline in the population size of Z. marina worldwide, including Korea. We examined the current population genetic status of this species on the southern coast of Korea by estimating the levels of genetic diversity and genetic structure of 10 geographic populations using eight nuclear microsatellite markers. The level of genetic diversity was found to be significantly lower for populations on Jeju Island [mean allelic richness (AR) = 1.92, clonal diversity (R) = 0.51], which is located approximately 155 km off the southernmost region of the Korean Peninsula, than for those in the South Sea (mean AR = 2.69, R = 0.82), which is on the southern coast of the mainland. South Korean eelgrass populations were substantially genetically divergent from one another (FST = 0.061-0.573), suggesting that limited contemporary gene flow has been taking place among populations. We also found weak but detectable temporal variation in genetic structure within a site over 10 years. In additional depth comparisons, statistically significant genetic differentiation was observed between shallow (or middle) and deep zones in two of three sites tested. Depleted genetic diversity, small effective population sizes (Ne) and limited connectivity for populations on Jeju Island indicate that these populations may be vulnerable to local extinction under changing environmental conditions, especially given that Jeju Island is one of the fastest warming regions around the world. Overall, our work will inform conservation and restoration efforts, including transplantation for eelgrass populations at the southern tip of

Physiological evidence for a sodium-dependent high-affinity phosphate and nitrate transport at the plasma membrane of leaf and root cells of Zostera marina L.

PubMed

Rubio, L; Linares-Rueda, A; García-Sánchez, M J; Fernández, J A

2005-02-01

Zostera marina L. is an angiosperm that grows in a medium in which inorganic phosphate (P(i)) and nitrate (NO(3)(-)) are present in micromolar concentrations and must be absorbed against a steep electrochemical potential gradient. The operation of a Na(+)-dependent NO(3)(-) transport was previously demonstrated in leaf cells of this plant, suggesting that other Na(+)-coupled systems could mediate the uptake of anions. To address this question, P(i) transport was studied in leaves and roots of Z. marina, as well as NO(3)(-) uptake in roots. Electrophysiological studies demonstrated that micromolar concentrations of P(i) induced depolarizations of the plasma membrane of root cells. However, this effect was not observed in leaf cells. P(i)-induced depolarizations showed Michaelis-Menten kinetics (K(m)=1.5+/-0.6 microM P(i); D(max)=7.8+/-0.8 mV), and were not observed in the absence of Na(+). However, depolarizations were restored when Na(+) was resupplied. NO(3)(-) additions also evoked depolarizations of the plasma membrane of root cells only in the presence of Na(+). Both NO(3)(-)- and P(i)-induced depolarizations were accompanied by an increase in cytoplasmic Na(+) activity, detected by Na(+)-sensitive microelectrodes. P(i) net uptake (measured in depletion experiments) was stimulated by Na(+). These results strongly suggest that P(i) uptake in roots of Z. marina is mediated by a high-affinity Na(+)-dependent transport system. Both NO(3)(-) and P(i) transport systems exploit the steep inwardly directed electrochemical potential gradient for Na(+), considering the low cytoplasmic Na(+) activity (10.7+/-3.3 mM Na(+)) and the high external Na(+) concentration (500 mM Na(+)).

Indirect effects of predators control herbivore richness and abundance in a benthic eelgrass (Zostera marina) mesograzer community.

PubMed

Amundrud, Sarah L; Srivastava, Diane S; O'Connor, Mary I

2015-07-01

Herbivore communities can be sensitive to changes in predator pressure (top-down effects) and resource availability (bottom-up effects) in a wide range of systems. However, it remains unclear whether such top-down and bottom-up effects reflect direct impacts of predators and/or resources on herbivores, or are indirect, reflecting altered interactions among herbivore species. We quantified direct and indirect effects of bottom-up and top-down processes on an eelgrass (Zostera marina) herbivore assemblage. In a field experiment, we factorially manipulated water column nutrients (with Osmocote(™) slow-release fertilizer) and predation pressure (with predator exclusion cages) and measured the effects on herbivore abundance, richness and beta diversity. We examined likely mechanisms of community responses by statistically exploring the response of individual herbivore species to trophic manipulations. Predators increased herbivore richness and total abundance, in both cases through indirect shifts in community composition. Increases in richness occurred through predator suppression of common gammarid amphipod species (Monocorophium acherusicum and Photis brevipes), permitting the inclusion of rarer gammarid species (Aoroides columbiae and Pontogeneia rostrata). Increased total herbivore abundance reflected increased abundance of a caprellid amphipod species (Caprella sp.), concurrent with declines in the abundance of other common species. Furthermore, predators decreased beta diversity by decreasing variability in Caprella sp. abundance among habitat patches. Osmocote(™) fertilization increased nutrient concentrations locally, but nutrients dissipated to background levels within 3 m of the fertilizer. Nutrient addition weakly affected the herbivore assemblage, not affecting richness and increasing total abundance by increasing one herbivore species (Caprella sp.). Nutrient addition did not affect beta diversity. We demonstrated that assemblage-level effects of

Distribution, structure and function of Nordic eelgrass (Zostera marina) ecosystems: implications for coastal management and conservation.

PubMed

Boström, Christoffer; Baden, Susanne; Bockelmann, Anna-Christina; Dromph, Karsten; Fredriksen, Stein; Gustafsson, Camilla; Krause-Jensen, Dorte; Möller, Tiia; Nielsen, Søren Laurentius; Olesen, Birgit; Olsen, Jeanine; Pihl, Leif; Rinde, Eli

2014-06-01

This paper focuses on the marine foundation eelgrass species, Zostera marina , along a gradient from the northern Baltic Sea to the north-east Atlantic. This vast region supports a minimum of 1480 km 2 eelgrass (maximum >2100 km 2 ), which corresponds to more than four times the previously quantified area of eelgrass in Western Europe.Eelgrass meadows in the low salinity Baltic Sea support the highest diversity (4-6 spp.) of angiosperms overall, but eelgrass productivity is low (<2 g dw m -2 d -1 ) and meadows are isolated and genetically impoverished. Higher salinity areas support monospecific meadows, with higher productivity (3-10 g dw m -2 d -1 ) and greater genetic connectivity. The salinity gradient further imposes functional differences in biodiversity and food webs, in particular a decline in number, but increase in biomass of mesograzers in the Baltic.Significant declines in eelgrass depth limits and areal cover are documented, particularly in regions experiencing high human pressure. The failure of eelgrass to re-establish itself in affected areas, despite nutrient reductions and improved water quality, signals complex recovery trajectories and calls for much greater conservation effort to protect existing meadows.The knowledge base for Nordic eelgrass meadows is broad and sufficient to establish monitoring objectives across nine national borders. Nevertheless, ensuring awareness of their vulnerability remains challenging. Given the areal extent of Nordic eelgrass systems and the ecosystem services they provide, it is crucial to further develop incentives for protecting them. © 2014 The Authors. Aquatic Conservation: Marine and Freshwater Ecosystems published by John Wiley & Sons, Ltd.

New Insights into Different Reproductive Effort and Sexual Recruitment Contribution between Two Geographic Zostera marina L. Populations in Temperate China

PubMed Central

Xu, Shaochun; Wang, Pengmei; Zhou, Yi; Zhang, Xiaomei; Gu, Ruiting; Liu, Xujia; Liu, Bingjian; Song, Xiaoyue; Xu, Shuai; Yue, Shidong

2018-01-01

Seagrasses are important components of global coastal ecosystems, and the eelgrass Zostera marina L. is widely distributed along the Atlantic and Pacific coasts in the temperate northern hemisphere, but limited datum related to the contribution of sexual reproduction to population recruitment have been reported. This study aimed to understand eelgrass sexual reproduction and population recruitment in Swan Lake (SLL), and Huiquan Bay (HQB) was included for comparison. Random sampling, permanent quadrats or cores and laboratory seed germination-based experimental methods were employed. The flowering, seed production, seed banks, seed germination, seedling survival, and seedling growth of eelgrass were investigated from July 2014 to December 2015 to evaluate the contribution of sexual reproduction to population recruitment. Results indicated a dominant role of asexual reproduction in HQB, while sexual reproduction played a relatively important role in SLL. The highest flowering shoot density in SLL was 517.27 ± 504.29 shoots m−2 (June) and represented 53.34% of the total shoots at the center site. The potential seed output per reproductive shoot and per unit area in SLL were 103.67 ± 37.95 seeds shoot−1 and 53,623.66 ± 19,628.11 seeds m−2, respectively. The maximum seed bank density in SLL was 552.21 ± 204.94 seeds m−2 (October). Seed germination mainly occurred from the middle of March to the end of May, and the highest seedling density was 296.88 ± 274.27 seedlings m−2 in April. The recruitment from seedlings accounted for 41.36% of the Z. marina population recruitment at the center site, while the sexual recruitment contribution at the patch site (50.52%) was greater than that at the center site. Seeds in SLL were acclimated to spring germination, while in HQB, they were acclimated to autumn germination (early October–late November). Seed bank density in HQB was very low, with a value of 254.35 ± 613.34 seeds m−2 (early October). However, seeds

New Insights into Different Reproductive Effort and Sexual Recruitment Contribution between Two Geographic Zostera marina L. Populations in Temperate China.

PubMed

Xu, Shaochun; Wang, Pengmei; Zhou, Yi; Zhang, Xiaomei; Gu, Ruiting; Liu, Xujia; Liu, Bingjian; Song, Xiaoyue; Xu, Shuai; Yue, Shidong

2018-01-01

Seagrasses are important components of global coastal ecosystems, and the eelgrass Zostera marina L. is widely distributed along the Atlantic and Pacific coasts in the temperate northern hemisphere, but limited datum related to the contribution of sexual reproduction to population recruitment have been reported. This study aimed to understand eelgrass sexual reproduction and population recruitment in Swan Lake (SLL), and Huiquan Bay (HQB) was included for comparison. Random sampling, permanent quadrats or cores and laboratory seed germination-based experimental methods were employed. The flowering, seed production, seed banks, seed germination, seedling survival, and seedling growth of eelgrass were investigated from July 2014 to December 2015 to evaluate the contribution of sexual reproduction to population recruitment. Results indicated a dominant role of asexual reproduction in HQB, while sexual reproduction played a relatively important role in SLL. The highest flowering shoot density in SLL was 517.27 ± 504.29 shoots m -2 (June) and represented 53.34% of the total shoots at the center site. The potential seed output per reproductive shoot and per unit area in SLL were 103.67 ± 37.95 seeds shoot -1 and 53,623.66 ± 19,628.11 seeds m -2 , respectively. The maximum seed bank density in SLL was 552.21 ± 204.94 seeds m -2 (October). Seed germination mainly occurred from the middle of March to the end of May, and the highest seedling density was 296.88 ± 274.27 seedlings m -2 in April. The recruitment from seedlings accounted for 41.36% of the Z. marina population recruitment at the center site, while the sexual recruitment contribution at the patch site (50.52%) was greater than that at the center site. Seeds in SLL were acclimated to spring germination, while in HQB, they were acclimated to autumn germination (early October-late November). Seed bank density in HQB was very low, with a value of 254.35 ± 613.34 seeds m -2 (early October). However, seeds in HQB

Distribution, structure and function of Nordic eelgrass (Zostera marina) ecosystems: implications for coastal management and conservation

PubMed Central

Boström, Christoffer; Baden, Susanne; Bockelmann, Anna-Christina; Dromph, Karsten; Fredriksen, Stein; Gustafsson, Camilla; Krause-Jensen, Dorte; Möller, Tiia; Nielsen, Søren Laurentius; Olesen, Birgit; Olsen, Jeanine; Pihl, Leif; Rinde, Eli

2014-01-01

This paper focuses on the marine foundation eelgrass species, Zostera marina, along a gradient from the northern Baltic Sea to the north-east Atlantic. This vast region supports a minimum of 1480 km2 eelgrass (maximum >2100 km2), which corresponds to more than four times the previously quantified area of eelgrass in Western Europe.Eelgrass meadows in the low salinity Baltic Sea support the highest diversity (4–6 spp.) of angiosperms overall, but eelgrass productivity is low (<2 g dw m-2 d-1) and meadows are isolated and genetically impoverished. Higher salinity areas support monospecific meadows, with higher productivity (3–10 g dw m-2 d-1) and greater genetic connectivity. The salinity gradient further imposes functional differences in biodiversity and food webs, in particular a decline in number, but increase in biomass of mesograzers in the Baltic.Significant declines in eelgrass depth limits and areal cover are documented, particularly in regions experiencing high human pressure. The failure of eelgrass to re-establish itself in affected areas, despite nutrient reductions and improved water quality, signals complex recovery trajectories and calls for much greater conservation effort to protect existing meadows.The knowledge base for Nordic eelgrass meadows is broad and sufficient to establish monitoring objectives across nine national borders. Nevertheless, ensuring awareness of their vulnerability remains challenging. Given the areal extent of Nordic eelgrass systems and the ecosystem services they provide, it is crucial to further develop incentives for protecting them. © 2014 The Authors. Aquatic Conservation: Marine and Freshwater Ecosystems published by John Wiley & Sons, Ltd. PMID:26167100

The interactive effects of the antifouling herbicides Irgarol 1051 and Diuron on the seagrass Zostera marina (L.).

PubMed

Chesworth, J C; Donkin, M E; Brown, M T

2004-02-25

The herbicides Irgarol 1051 (2-(tert-butylamino)-4-cyclopropylamino)-6-(methylthio)-1,3,5-triazine) and Diuron (3-(3',4'-dichlorophenyl)-1,1-dimethylurea) are commonly incorporated into antifouling paints to boost the efficacy of the compound towards algae. Previous investigations have identified environmental concentrations of these herbicides as being a threat to non-target organisms, such as seagrasses. Their individual toxicity has been assessed, but they can co-occur and interact, potentially increasing their toxicity and the threat posed to seagrass meadows. Chlorophyll fluorescence (Fv:Fm) and leaf specific biomass ratio (representing plant growth) were examined in Zostera marina L. after a 10-day exposure to the individual herbicides. The EC20 for each herbicide was determined and these then used in herbicide mixtures to assess their interactive effects. Irgarol 1051 was found to be more toxic than Diuron with lowest observable effect concentrations for Fv:Fm reduction of 0.5 and 1.0 +/- microg/l and 10-day EC50 values of 1.1 and 3.2 microg/l, respectively. Plants exposed to Irgarol 1051 and Diuron showed a significant reduction in growth at concentrations of 1.0 and 5.0 microg/l, respectively. When Z. marina was exposed to mixtures, the herbicides commonly interacted additively or antagonistically, and no significant further reduction in photosynthetic efficiency was found at any concentration when compared to plants exposed to the individual herbicides. However, on addition of the Diuron EC20 to varying Irgarol 1051 concentrations and the Irgarol 1051 EC20 to varying Diuron concentrations, significant reductions in Fv:Fm were noted at an earlier stage. The growth of plants exposed to Diuron plus the Irgarol 1051 EC20 were significantly reduced when compared to plants exposed to Diuron alone, but only at the lower concentrations. Growth of plants exposed to Irgarol 1051 and the Diuron EC20 showed no significant reduction when compared to the growth of

Pollutant tracking for 3 Western North Atlantic sea grasses by remote sensing: Preliminary diminishing white light responses of Thalassia testudinum, Halodule wrightii, and Zostera marina.

PubMed

Thorhaug, Anitra; Berlyn, Graeme P; Poulos, Helen M; Goodale, Uromi M

2015-08-15

Sea grasses are foundation species for estuarine ecosystems. The available light for sea grasses diminishes rapidly during pollutant spills, effluent releases, disturbances such as intense riverine input, and tidal changes. We studied how sea grasses' remote-sensing signatures and light-capturing ability respond to short term light alterations. In vivo responses were measured over the entire visible-light spectra to diminishing white-light on whole-living-plants' spectral reflectance, including 6h of full oceanic-light fluences from 10% to 100%. We analyzed differences by various reflectance indices. We compared the sea grasses species responses of tropical vs. temperate and intertidals (Halodule wrightii, and Zostera marina) vs. subtidal (Thalassia testudinum). Reflectance diminished with decreasing light intensity that coincided with greater accessory pigment stimulation (anthocyanin, carotenoids, xanthins). Chlorophyll a and Chlorophyll b differed significantly among species (Thalassia vs. Halodule). Photosynthetic efficiency diminished at high light intensities. The NDVI index was inadequate to perceive these differences. Our results demonstrate the leaf-level utility of data to remote sensing for mapping sea grass and sea grass stress. Copyright © 2015 Elsevier Ltd. All rights reserved.

Long-term evolution (1988-2008) of Zostera spp. meadows in Arcachon Bay (Bay of Biscay)

NASA Astrophysics Data System (ADS)

Martin, Plus; Sébastien, Dalloyau; Gilles, Trut; Isabelle, Auby; de Montaudouin, Xavier; Emery, Éric; Claire, Noël; Christophe, Viala

2010-04-01

The spatial variability of seagrass meadows in Arcachon Bay, was studied between 1988 and 2008 using a combination of mapping techniques based on aerial photographs for intertidal dwarf-grass ( Zostera noltii) beds and acoustic sonar for permanently submerged eelgrass ( Zostera marina) populations. The results show a severe decline over the period for both species, as well as an acceleration of the decline since 2005 for Z. noltii. The total surface regression over the studied period is estimated to be 22.8 km 2 for Z. noltii and 2.7 km 2 for Z. marina, which represent declines of 33 and 74% respectively. Environmental data time series spanning the same period were investigated in order to seek the causes for such a decline. The calculated inter-annual trends for temperature, salinity, nitrate plus nitrite, ammonia, suspended sediment and chlorophyll a did not identify any clear environmental change capable of explaining the observed seagrass regression. For instance, no evident sign of eutrophication was observed over the study period. On the other hand, we suggest that the observed variations of ammonia in the inner part of the lagoon are a symptom of the seagrasses' disappearance and thus, a first sign indicating a change of the Arcachon Bay ecosystem towards more instability and vulnerability. Several hypotheses to explain the observed seagrass decay are proposed.

In-situ Phytoremediation of PAH and PCB Contaminated Marine Sediments with Eelgrass (Zostera marina)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Huesemann, Michael H.; Hausmann, Tom S.; Fortman, Timothy J.

In view of the fact that there are presently no cost-effective in-situ treatment technologies for contaminated sediments, a 60 week long phytoremediation feasibility study was conducted in seawater-supplied outdoor ponds to determine whether eelgrass (Zostera marina) is capable of removing polynuclear aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs) from submerged marine sediments. It was determined that all PAHs and PCBs, independent of the number of aromatic rings and degree of chlorination, respectively, were removed to a much larger extent in planted sediments compared to unplanted controls. After 60 weeks of treatment, the concentration of total PAHs decreased by 73% inmore » planted sediments but only 25% in unplanted controls. Similarly, total PCBs declined by 60% in the presence of plants while none were removed in the unplanted sediment. Overall, PAH and PCB biodegradation was greatest in the sediment layer that contained most of the eelgrass roots. Abiotic desorption tests conducted at week 32 confirmed that the phytoremediation process was not controlled by mass-transfer or bioavailability limitations since all PAHs and PCBs desorbed rapidly and to a large extent from the sediment. PAHs were detected in both roots and shoots, with root and shoot bioaccumulation factors for total PAHs amounting to approximately 3 and 1, respectively, after 60 weeks of phytoremediation treatment. Similarly, the root bioccumulation factor for total PCBs was around 4, while no PCBs were detected in the eelgrass leaves at the end of the experiment. The total mass fraction of PAHs and PCBs absorbed and translocated by plant biomass during the 60 week period was insignificant, amounting to less than 0.5% of the total mass of PAHs and PCBs which was initially present in the sediment. Finally, the number of total heterotrophic bacteria and hydrocarbon degraders was slightly but not statistically significantly greater in planted sediments than in unplanted

Science and Management of the Introduced Seagrass Zostera ...

EPA Pesticide Factsheets

Healthy seagrass is considered a prime indicator of estuarine ecosystem function. On the Pacific coast of North America, at least two congeners of Zostera occur: native Zostera marina, and introduced, Z. japonica. Z. japonica is considered “invasive” and therefore, ecologically and economically harmful by some, while others consider it benign or perhaps beneficial. Z. japonica does not appear on the Federal or the Oregon invasive species or noxious weed lists. However, the State of California lists it as both an invasive and noxious weed; Washington State recently listed it as a noxious weed. We describe the management dynamics in North America with respect to these congener species and highlight the science and policies behind these decisions. In recent years, management strategies at the state level have ranged from historical protection of Z. japonica as a priority habitat in Washington to eradication in California. In 2011, Washington State reversed its long standing policy to protect Z. japonica and is developing permits for chemical control of this plant. This fractured management approach contradicts efforts to conserve and protect seagrass in other regions of the US and around the world. Science must play a critical role in the assessment of Z. japonica ecology and the immediate and long-term effects of management actions. The information and recommendations provided here can serve as a basis for providing scientific data in order to develo

High mortality of Zostera marina under high temperature regimes but minor effects of the invasive macroalgae Gracilaria vermiculophylla

NASA Astrophysics Data System (ADS)

Höffle, H.; Thomsen, M. S.; Holmer, M.

2011-03-01

The present study tested for density-dependent effects of the invasive drift macroalgae Gracilaria vermiculophylla (Ohmi) Papenfuss on growth and survival of the native eelgrass, Zostera marina L., under different temperature levels. Three weeks laboratory experiments were conducted in Odense, Denmark, combining three algae densities (control, low 1.9 kg WW m -2, high 4.5 kg WW m -2) with typical Danish summer temperatures (18 °C) and elevated temperatures (21 °C and 27 °C). There was a significant effect of temperature on shoot survival with on average 68% mortality in the high temperature treatment but almost no mortality at the two lower temperatures. The higher mortality was probably caused by high sulphide levels in the sediment pore water (0.6 mmol l -1 at 18 °C compared to 3.7 mmol l -1 at 27 °C). Above-ground growth of the surviving shoots was also significantly affected by temperature, with leaf elongation rates being negatively affected, while the leaf plastochrone interval increased. Relative growth rate was significantly higher at 21 °C than at 18 °C or 27 °C, whereas rhizome elongation was significantly lowest at 27 °C. Elemental sulphur content in the plant tissues increased significantly with temperature and was up to 34 times higher (S 0 in rhizomes) at 27 °C compared to the lower temperatures. In contrast to the temperature effects, cover by G. vermiculophylla did not cause significant effects on any seagrass responses. However, there was a (non-significant) negative effect of algal cover at the highest temperature, where the seagrass is already stressed. The latter results suggest that more studies should test for interaction effects between temperature and other anthropogenic stressors given that temperature is predicted to increase in the near future.

Desulfomusa hansenii gen. nov., sp. nov., a novel marine propionate-degrading, sulfate-reducing bacterium isolated from Zostera marina roots.

PubMed

Finster, K; Thomsen, T R; Ramsing, N B

2001-11-01

The physiology and phylogeny of a novel sulfate-reducing bacterium, isolated from surface-sterilized roots of the marine macrophyte Zostera marina, are presented. The strain, designated P1T, was enriched and isolated in defined oxygen-free, bicarbonate-buffered, iron-reduced seawater medium with propionate as sole carbon source and electron donor and sulfate as electron acceptor. Strain P1T had a rod-shaped, slightly curved cell morphology and was motile by means of a single polar flagellum. Cells generally aggregated in clumps throughout the growth phase. High CaCl2 (10 mM) and MgCl2 (50 mM) concentrations were required for optimum growth. In addition to propionate, strain P1T utilized fumarate, succinate, pyruvate, ethanol, butanol and alanine. Oxidation of propionate was incomplete and acetate was formed in stoichiometric amounts. Strain P1T thus resembles members of the sulfate-reducing genera Desulfobulbus and Desulforhopalus, which both oxidize propionate incompletely and form acetate in addition to CO2. However, sequence analysis of the small-subunit rDNA and the dissimilatory sulfite reductase gene revealed that strain P1T was unrelated to the incomplete oxidizers Desulfobulbus and Desulforhopalus and that it constitutes a novel lineage affiliated with the genera Desulfococcus, Desulfosarcina, Desulfonema and 'Desulfobotulus'. Members of this branch, with the exception of 'Desulfobotulus sapovorans', oxidize a variety of substrates completely to CO2. Strain P1T (= DSM 12642T = ATCC 700811T) is therefore proposed as Desulfomusa hansenii gen. nov., sp. nov. Strain p1T thus illustrates the difficulty of extrapolating rRNA similarities to physiology and/or ecological function.

Top-down impact through a bottom-up mechanism: the effect of limpet grazing on growth, productivity and carbon allocation of Zostera marina L. (eelgrass).

PubMed

Zimmerman, Richard C; Kohrs, Donald G; Alberte, Randall S

1996-09-01

The unusual appearance of a commensal eelgrass limpet [Tectura depicta (Berry)] from southern California at high density (up to 10 shoot -1 ) has coincided with the catastrophic decline of a subtidal Zostera marina L. meadow in Monterey Bay, California. Some commensal limpets graze the chloroplast-rich epidermis of eelgrass leaves, but were not known to affect seagrass growth or productivity. We evaluated the effect on eelgrass productivity of grazing by limpets maintained at natural densities (8±2 shoot -1 ) in a natural light mesocosm for 45 days. Growth rates, carbon reserves, root proliferation and net photosynthesis of grazed plants were 50-80% below those of ungrazed plants, but biomass-specific respiration was unaffected. The daily period of irradiance-saturated photosynthesis (H sat ) needed to maintain positive carbon balance in grazed plants approached 13.5 h, compared with 5-6 h for ungrazed plants. The amount of carbon allocated to roots of ungrazed plants was 800% higher than for grazed plants. By grazing the chlorophyll-rich epidermis, T. depicta induced carbon limitation in eelgrass growing in an other-wise light-replete environment. Continued northward movement of T. depicta, may have significant impacts on eelgrass production and population dynamics in the northeast Pacific, even thought this limpet consumes very little plant biomass. This interaction is a dramatic example of top-down control (grazing/predation) of eelgrass productivity and survival operating via a bottom-up mechanism (photosynthesis limitation).

Decline in eelgrass ( Zostera marina L.) in Long Island Sound near Millstone Point, Connecticut (USA) unrelated to thermal input

NASA Astrophysics Data System (ADS)

Keser, Milan; Swenarton, John T.; Vozarik, Joseph M.; Foertch, James F.

2003-02-01

Eelgrass ( Zostera marina L.) shoot density, seed-bearing shoot abundance, shoot length, and standing stock biomass were monitored during summer months from 1985 to 2000 at three locations in eastern Long Island Sound (LIS) near Millstone Power Station (MPS), Waterford, Connecticut, USA. Short-term declines in eelgrass abundance were directly associated with fouling and overgrowth of eelgrass on two occasions; once by blue mussels ( Mytilus edulis) and once by a bloom of green algae ( Cladophora spp.). Analysis of long-term trends indicated some degree of decline in most of the parameters examined at all three areas monitored. The spatial relationship of the long-term eelgrass declines suggests primary causal factors other than the power plant discharge or regional climate change. Two populations to the east of MPS and near the fringes of the thermal plume (<1.5 km from the MPS discharge to LIS) exhibited only slight declines over the 16-y study period and thermal input from MPS to these sites was minimal (<1 °C above ambient conditions). By comparison, heavy eelgrass losses were documented in the Niantic River, located >2 km from the power plant thermal plume. Die-offs of entire individual eelgrass study beds in the Niantic River were observed on five separate occasions during the study with no sign of recovery. While the causes were not determined, anthropogenic influences such as nutrient loading from surface run-off and groundwater sources may have contributed to observed declines. The Niantic River has a more restricted tidal inlet and is closer to sources of nutrient enrichment than Jordan Cove. Historically, eelgrass has ranged to far western reaches of LIS, but over the last century has become restricted to the easternmost third of the Connecticut coastline due to nutrient loading and eutrophication of the western portions. This study suggests that the west-to-east declining trend in eelgrass distribution in LIS may be further progressing.

Effect of Temperature and Nutrient Manipulations on eelgrass Zostera marina L. from the Pacific Northwest, USA

EPA Science Inventory

Global climate change will have a large impact on the three predominate drivers of estuarine seagrass productivity, temperature, light and nutrients. I experimentally evaluate the response of Pacific Northwest Z. marina to interactive effects of temperature and nutrient conditio...

Disturbance of eelgrass Zostera marina by commercial mussel Mytilus edulis harvesting in Maine: Dragging impacts and habitat recovery

USGS Publications Warehouse

Neckles, Hilary A.; Short, Frederick T.; Barker, Seth; Kopp, Blaine S.

2005-01-01

We studied the effects of commercial harvest of blue mussels Mytilus edulis on eelgrass Zostera marina L. in Maquoit Bay, Maine, USA, at a hierarchy of scales. We used aerial photography, underwater video, and eelgrass population- and shoot-based measurements to quantify dragging impacts within 4 sites that had been disturbed at different times over an approximate 7 yr interval, and to project eelgrass meadow recovery rates. Dragging had disturbed 10% of the eelgrass cover in Maquoit Bay, with dragged sites ranging from 3.4 to 31.8 ha in size. Dragging removed above- and belowground plant material from the majority of the bottom in the disturbed sites. One year following dragging, eelgrass shoot density, shoot height and total biomass of disturbed sites averaged respectively 2 to 3%, 46 to 61% and <1% that of the reference sites. Substantial differences in eelgrass biomass persisted between disturbed and reference sites up to 7 yr after dragging. Dragging did not affect physical characteristics of the sediment. The pattern and rate of eelgrass bed recovery depended strongly on initial dragging intensity; areas of relatively light dragging with many remnant eelgrass patches (i.e. patches that were missed by the mussel dredge) showed considerable revegetation in 1 yr. However, by developing recovery trajectories from measurements at sites disturbed in different years, we projected that it would require a mean of 10.6 yr for recovery of eelgrass shoot density within the areas of intense dragging characterizing most of the disturbed sites. A spatial simulation model based on measured rates of lateral patch-expansion (mean 12.5 cm yr-1) and new-patch recruitment (mean 0.19 patches m-2 yr-1) yielded a mean bed recovery time of 9 to 11 yr following dragging, depending on initial degree of plant removal. Model simulations suggested that with favorable environmental conditions, eelgrass beds might recover from dragging disturbance in 6 yr; conversely, recovery under

Disturbance of eelgrass Zostera marina by commercial mussel Mytilus edulis harvesting in Maine: Dragging impacts and habitat recovery

USGS Publications Warehouse

Neckles, H.A.; Short, F.T.; Barker, S.; Kopp, B.S.

2005-01-01

We studied the effects of commercial harvest of blue mussels Mytilus edulis on eelgrass Zostera marina L. in Maquoit Bay, Maine, USA, at a hierarchy of scales. We used aerial photography, underwater video, and eelgrass population- and shoot-based measurements to quantify dragging impacts within 4 sites that had been disturbed at different times over an approximate 7 yr interval, and to project eelgrass meadow recovery rates. Dragging had disturbed 10% of the eelgrass cover in Maquoit Bay, with dragged sites ranging from 3.4 to 31.8 ha in size. Dragging removed above- and belowground plant material from the majority of the bottom in the disturbed sites. One year following dragging, eelgrass shoot density, shoot height and total biomass of disturbed sites averaged respectively 2 to 3 %, 46 to 61 % and <1 % that of the reference sites. Substantial differences in eelgrass biomass persisted between disturbed and reference sites up to 7 yr after dragging. Dragging did not affect physical characteristics of the sediment. The pattern and rate of eelgrass bed recovery depended strongly on initial dragging intensity; areas of relatively light dragging with many remnant eelgrass patches (i.e. patches that were missed by the mussel dredge) showed considerable revegetation in 1 yr. However, by developing recovery trajectories from measurements at sites disturbed in different years, we projected that it would require a mean of 10.6 yr for recovery of eelgrass shoot density within the areas of intense dragging characterizing most of the disturbed sites. A spatial simulation model based on measured rates of lateral patch-expansion (mean 12.5 cm yr-1) and new-patch recruitment (mean 0.19 patches m-2 yr-1) yielded a mean bed recovery time of 9 to 11 yr following dragging, depending on initial degree of plant removal. Model simulations suggested that with favorable environmental conditions, eelgrass beds might recover from dragging disturbance in 6 yr; conversely, recovery under

Determining bathymetric distributions of the eelgrass Zostera ...

EPA Pesticide Factsheets

Improved methods for determining bathymetric distributions of dominant intertidal plants throughout their estuarine range are needed. Zostera marina is a seagrass native to estuaries of the northeastern Pacific and many other sectors of the world ocean. The technique described here employed large format aerial photography using false color near-infrared film with digital image classification, and the production of digital bathymetric models of shallow estuaries such as those occurring in turbid waters of the Pacific Northwest USA. Application of geographic information system procedures to the eelgrass classifications and bathymetry distributions yielded digital bathymetric distributions based upon a very large number of observations. Similar bathymetric patterns were obtained for the three estuaries surveyed, and approximately 90% of the classified eelgrass occurred within the depth range -1.0 m to +1.0 m (MLLW). Comparison of these distributions with ground surveys of eelgrass lower depth limits indicated that the area of undetected subtidal eelgrass constituted 86% overall accuracy) in each estuary. The pattern of eelgrass in one estuary was distinctly different from those in the other two systems, illustrating the potential usefulness of this technique in exploring causative factors for such differences in estuarine intertidal vegetation distributions. Improved methods for determining bathymetric distributions of dominant intertidal plants throughout

Molluscs associated with a subtidal Zostera marina L. bed in southern Spain: Linking seasonal changes of fauna and environmental variables

NASA Astrophysics Data System (ADS)

Rueda, Jose L.; Salas, Carmen

2008-08-01

The temporal variation of the molluscan fauna associated with a deep Zostera marina bed (12-14 m depth) in Cañuelo Bay (southern Spain) has been studied in relation to water, sediment and eelgrass variables. Samples of molluscs from the sediment and the eelgrass (5 replicates per season) were seasonally collected using a quadrat of 25 × 25 cm. The water column was characterized by the temperature and chlorophyll a concentration. The grain size distribution of the sediment and percentage of organic matter (%OM) were also studied. Estimations of the shoot density, leaf/rhizome biomass and Leaf Area Index (LAI) have been obtained for each sample. Statistical analyses have been performed with SYSTAT and PRIMER software. A total of 2396 individuals and 85 species of molluscs were collected. The most dominant species were infaunal bivalves such as Tellina distorta (28.1%), Dosinia lupinus, Tellina fabula and Chamelea gallina. The gastropods Jujubinus striatus (4.6%), Nassarius pygmaeus and Bittium reticulatum were the dominant epifaunal species. The most frequent species was T. distorta (100%), followed by other infaunal bivalves such as T. fabula, Solemya togata or Lucinella divaricata. The most frequent gastropods were J. striatus (95%), followed by B. reticulatum, N. pygmaeus, Nassarius reticulatus, Mitrella minor and Smaragdia viridis. The abundance of molluscs displayed significant maximum values in summer and autumn (above 2500 indiv. m -2) and minimum values in spring (below 1500 indiv. m -2). The abundance of the epifauna was related with leaf biomass, whereas that of the infauna was positively related with %OM. The species richness also followed a significant seasonal variation with maximum values in summer (64 species in all summer samples) and minimum values in autumn (44 in all autumn samples), and was positively related with LAI. In both qualitative and quantitative cluster/MDS, samples (replicates) mainly grouped according to the season, with

Environmental Impact Research Program. The Use of Fertilizer To Enhance Transplants of the Seagrasses Zostera marina and Halodule wrightii.

DTIC Science & Technology

1987-08-01

throughout Florida, the Gulf Coast, and the U.S. Virgin Islands. These two species co-occur only along a narrow band of the middle Atlantic ...Thayer et al. 1984). Zostera dominates the temperate seagrass community on both the Atlantic and Pacific coasts, while Halodule occurs in the United States...C and allowed to dry to a constant weight. After drying, each 9 - tN.WVunEY .M .UrS, .m w sample was pulverized with a mortar and pestle to ensure

Seagrass (Zostera marina) Colonization Promotes the Accumulation of Diazotrophic Bacteria and Alters the Relative Abundances of Specific Bacterial Lineages Involved in Benthic Carbon and Sulfur Cycling

PubMed Central

Sun, Feifei; Zhang, Xiaoli; Zhang, Qianqian; Liu, Fanghua

2015-01-01

Seagrass colonization changes the chemistry and biogeochemical cycles mediated by microbes in coastal sediments. In this study, we molecularly characterized the diazotrophic assemblages and entire bacterial community in surface sediments of a Zostera marina-colonized coastal lagoon in northern China. Higher nitrogenase gene (nifH) copy numbers were detected in the sediments from the vegetated region than in the sediments from the unvegetated region nearby. The nifH phylotypes detected were mostly affiliated with the Geobacteraceae, Desulfobulbus, Desulfocapsa, and Pseudomonas. Redundancy analysis based on terminal restriction fragment length polymorphism analysis showed that the distribution of nifH genotypes was mostly shaped by the ratio of total organic carbon to total organic nitrogen, the concentration of cadmium in the sediments, and the pH of the overlying water. High-throughput sequencing and phylogenetic analyses of bacterial 16S rRNA genes also indicated the presence of Geobacteraceae and Desulfobulbaceae phylotypes in these samples. A comparison of these results with those of previous studies suggests the prevalence and predominance of iron(III)-reducing Geobacteraceae and sulfate-reducing Desulfobulbaceae diazotrophs in coastal sedimentary environments. Although the entire bacterial community structure was not significantly different between these two niches, Desulfococcus (Deltaproteobacteria) and Anaerolineae (Chloroflexi) presented with much higher proportions in the vegetated sediments, and Flavobacteriaceae (Bacteroidetes) occurred more frequently in the bare sediments. These data suggest that the high bioavailability of organic matter (indicated by relatively lower carbon-to-nitrogen ratios) and the less-reducing anaerobic condition in vegetated sediments may favor Desulfococcus and Anaerolineae lineages, which are potentially important populations in benthic carbon and sulfur cycling in the highly productive seagrass ecosystem. PMID:26209674

Seagrass (Zostera marina) Colonization Promotes the Accumulation of Diazotrophic Bacteria and Alters the Relative Abundances of Specific Bacterial Lineages Involved in Benthic Carbon and Sulfur Cycling.

PubMed

Sun, Feifei; Zhang, Xiaoli; Zhang, Qianqian; Liu, Fanghua; Zhang, Jianping; Gong, Jun

2015-10-01

Seagrass colonization changes the chemistry and biogeochemical cycles mediated by microbes in coastal sediments. In this study, we molecularly characterized the diazotrophic assemblages and entire bacterial community in surface sediments of a Zostera marina-colonized coastal lagoon in northern China. Higher nitrogenase gene (nifH) copy numbers were detected in the sediments from the vegetated region than in the sediments from the unvegetated region nearby. The nifH phylotypes detected were mostly affiliated with the Geobacteraceae, Desulfobulbus, Desulfocapsa, and Pseudomonas. Redundancy analysis based on terminal restriction fragment length polymorphism analysis showed that the distribution of nifH genotypes was mostly shaped by the ratio of total organic carbon to total organic nitrogen, the concentration of cadmium in the sediments, and the pH of the overlying water. High-throughput sequencing and phylogenetic analyses of bacterial 16S rRNA genes also indicated the presence of Geobacteraceae and Desulfobulbaceae phylotypes in these samples. A comparison of these results with those of previous studies suggests the prevalence and predominance of iron(III)-reducing Geobacteraceae and sulfate-reducing Desulfobulbaceae diazotrophs in coastal sedimentary environments. Although the entire bacterial community structure was not significantly different between these two niches, Desulfococcus (Deltaproteobacteria) and Anaerolineae (Chloroflexi) presented with much higher proportions in the vegetated sediments, and Flavobacteriaceae (Bacteroidetes) occurred more frequently in the bare sediments. These data suggest that the high bioavailability of organic matter (indicated by relatively lower carbon-to-nitrogen ratios) and the less-reducing anaerobic condition in vegetated sediments may favor Desulfococcus and Anaerolineae lineages, which are potentially important populations in benthic carbon and sulfur cycling in the highly productive seagrass ecosystem. Copyright © 2015

Ecological periodic tables for benthic macrofaunal usage of estuarine habitats in the US Pacific Northwest

EPA Science Inventory

Estuary-wide benthic macrofauna─habitat associations were determined for 9 habitats (intertidal eelgrass [Zostera marina], dwarf eelgrass [Zostera japonica], oyster [Crassostrea gigas], mud shrimp [Upogebia pugettensis], ghost shrimp [Neotrypaea californiensis], shell, sand, mud,...

ABUNDANCE AND DISTRIBUTION OF INDIGENOUS, NONINDIGENOUS, AND CRYPTOGENIC BENTHIC MACROFAUNA IN WILLAPA BAY, WASHINGTON, USA

EPA Science Inventory

Benthic macrofaunal samples were collected in Willapa Bay, WA, in four habitats [eelgrass (Zostera marina), Atlantic cordgrass (Spartina alterniflora), mud shrimp (Upogebia pugettensis), ghost shrimp (Neotrypaea californiensis)] in 1996 and in seven habitats (Zostera, Spartina, U...

Effects of salinity on survival of the exotic seagrass Zostera japonica subjected to extreme high temperature stress

EPA Science Inventory

Zostera japonica is a non-indigenous seagrass that is expanding along the Pacific Coast of North America. The ecophysiology of this seagrass is poorly studied and management of the species is fragmented. We collected Z. japonica plants from Padilla Bay, WA., Yaquina Bay and Coo...

Effect of multiple stressors on eelgrass Zostera marina L. from the Pacific Northwest, USA: Manipulation of temperature and nutrients - November 2011

EPA Science Inventory

Estuarine eelgrass beds in the Pacific Northwest (PNW) are being exposed to a range of natural and anthropogenic stressors and climate change. The purpose of the current study was to examine the effects of temperature and nutrient quantity on Z. marina growth and physiology. Ma...

Effects of Climate Change on Eelgrass Wasting Disease

NASA Astrophysics Data System (ADS)

Groner, M. L.; Burge, C. A.; Friedman, C. S.; Van Alstyne, K.; Wyllie-Echeverria, S.; Eisenlord, M. E.; Bucci, J.; Cox, R.; Turner, M.

2016-02-01

Climate change affects the health of marine organisms. Ocean acidification (OA) and rising water temperature can alter species interactions, extend organisms beyond their physiological optima and thus are predicted to increase infectious disease events. When disease impacts ecosystem engineers, community level change is possible. Eelgrass, Zostera marina, are ecosystem engineers providing ecosystem services including carbon sequestration and local mitigation of OA. Eelgrass wasting disease (WD), caused by infection from the opportunist pathogen, Labyrinthula zosterae, can be associated with rapid population declines of Z. marina. We conducted two experiments to determine the influence of OA and increased water temperature (separately) on the presence and severity of the WD. In the first, we grew Z. marina under three C02 conditions, 400, 800, and 1600 ppm, to represent current, 'bad day' and 'future' climate scenarios. After acclimation to these conditions, half the treatments were exposed to L. zosterae. In the high CO2, low pH water, the proportion of diseased Z. marina leaves decreased when compared to leaves in the low CO2, high pH water. In a second experiment, Z. marina adults and seedlings were allowed to acclimate to low (11° C), high (18° C) and fluctuating (between 11 and 18° C) water temperatures and then half these individuals were exposed to L. zosterae. Disease occurred more rapidly and with higher severity in seedlings and at high and fluctuating temperatures. Further analyses will allow us to quantify Labyrinthula load, and production of potential host defenses (total phenols and condensed tannins) among these samples. Our results suggest that host-pathogen relationships for this system will be altered in changing climatic conditions and that further research is needed to understand how climate change influences community resilience and ecosystem system services provided by eelgrass meadows.

Allelopathic effect of Chattonella marina var. marina (Raphidophyceae) on Gymnodinium catenatum (Dinophycea).

PubMed

Fernández-Herrera, Leyberth J; Band-Schmidt, Christine J; López-Cortés, David J; Hernández-Guerrero, Claudia J; Bustillos-Guzmán, José J; Núñez-Vázquez, Erick

2016-01-01

The allelopathic effect of the raphidophyte Chattonella marina var. marina on the dinoflagellate Gymnodinium catenatum was determined. Both species are harmful algal bloom forming algae, produce toxic metabolites, and can co-exist in the environment. In general, raphidophytes tend to dominate over dinoflagellates, which may indicate an allelopathic effect of the former algae. Strains of C. marina var. marina and G. catenatum isolated from Bahía de La Paz were cultured in bi-algal cultures with and without cell contact. Additionally, cultures of G. catenatum were exposed to cell-free culture filtrates of the raphidophyte to test whether soluble allelopathic molecules are active. During late stationary phase, both species were cultivated in mixed cultures for 72h using the following cell abundance proportions: 20×10 3 cellsL -1 : 20×10 3 cellsL -1 (1:1; G. catenatum: C. marina); 10×10 3 cellsL -1 : 20×10 3 cellsL -1 (1:2), and 20×10 3 cellsL -1 : 10×10 3 cellsL -1 (2:1). Cells of G. catenatum were also exposed to different volumes of cell filtrates of C. marina (10, 20, and 50mL) using the same cell abundance proportions for 24h. Samples were taken daily for cell counts and microscopic observations. Growth inhibition was higher when there was cell contact between both species, however mortality of G. catenatum was also observed without direct cell contact, indicating that toxic metabolites are liberated to the culture medium. Changes in cell morphology of G. catenatum occurred in the presence of cells and filtrates of C. marina, such as loss of flagella and motility, swelling, loss of girdle and sulci, prominent nucleus, rupture of cell membrane, and cell lysis. Induction of temporary cysts was also observed. These results suggest that toxic metabolites are liberated to the medium by C. marina, affecting G. catenatum by inhibiting its growth and causing changes in its life history, providing new insights of interactions between raphidophytes and

33 CFR 80.1118 - Marina Del Rey, CA.

Code of Federal Regulations, 2010 CFR

2010-07-01

... NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1118 Marina Del Rey, CA. (a) A line drawn from Marina Del Rey Breakwater South Light 1 to Marina Del Rey Light 4. (b) A line drawn from Marina Del Rey... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Marina Del Rey, CA. 80.1118...

33 CFR 80.1118 - Marina Del Rey, CA.

Code of Federal Regulations, 2012 CFR

2012-07-01

... NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1118 Marina Del Rey, CA. (a) A line drawn from Marina Del Rey Breakwater South Light 1 to Marina Del Rey Light 4. (b) A line drawn from Marina Del Rey... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Marina Del Rey, CA. 80.1118...

33 CFR 80.1118 - Marina Del Rey, CA.

Code of Federal Regulations, 2013 CFR

2013-07-01

... NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1118 Marina Del Rey, CA. (a) A line drawn from Marina Del Rey Breakwater South Light 1 to Marina Del Rey Light 4. (b) A line drawn from Marina Del Rey... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Marina Del Rey, CA. 80.1118...

33 CFR 80.1118 - Marina Del Rey, CA.

Code of Federal Regulations, 2011 CFR

2011-07-01

... NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1118 Marina Del Rey, CA. (a) A line drawn from Marina Del Rey Breakwater South Light 1 to Marina Del Rey Light 4. (b) A line drawn from Marina Del Rey... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Marina Del Rey, CA. 80.1118...

33 CFR 80.1118 - Marina Del Rey, CA.

Code of Federal Regulations, 2014 CFR

2014-07-01

... NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1118 Marina Del Rey, CA. (a) A line drawn from Marina Del Rey Breakwater South Light 1 to Marina Del Rey Light 4. (b) A line drawn from Marina Del Rey... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Marina Del Rey, CA. 80.1118...

Development of an Efficient Protein Extraction Method Compatible with LC-MS/MS for Proteome Mapping in Two Australian Seagrasses Zostera muelleri and Posidonia australis.

PubMed

Jiang, Zhijian; Kumar, Manoj; Padula, Matthew P; Pernice, Mathieu; Kahlke, Tim; Kim, Mikael; Ralph, Peter J

2017-01-01

The availability of the first complete genome sequence of the marine flowering plant Zostera marina (commonly known as seagrass) in early 2016, is expected to significantly raise the impact of seagrass proteomics. Seagrasses are marine ecosystem engineers that are currently declining worldwide at an alarming rate due to both natural and anthropogenic disturbances. Seagrasses (especially species of the genus Zostera ) are compromised for proteomic studies primarily due to the lack of efficient protein extraction methods because of their recalcitrant cell wall which is rich in complex polysaccharides and a high abundance of secondary metabolites in their cells. In the present study, three protein extraction methods that are commonly used in plant proteomics i.e., phenol (P); trichloroacetic acid/acetone/SDS/phenol (TASP); and borax/polyvinyl-polypyrrolidone/phenol (BPP) extraction, were evaluated quantitatively and qualitatively based on two dimensional isoelectric focusing (2D-IEF) maps and LC-MS/MS analysis using the two most abundant Australian seagrass species, namely Zostera muelleri and Posidonia australis . All three tested methods produced high quality protein extracts with excellent 2D-IEF maps in P. australis . However, the BPP method produces better results in Z. muelleri compared to TASP and P. Therefore, we further modified the BPP method (M-BPP) by homogenizing the tissue in a modified protein extraction buffer containing both ionic and non-ionic detergents (0.5% SDS; 1.5% Triton X-100), 2% PVPP and protease inhibitors. Further, the extracted proteins were solubilized in 0.5% of zwitterionic detergent (C7BzO) instead of 4% CHAPS. This slight modification to the BPP method resulted in a higher protein yield, and good quality 2-DE maps with a higher number of protein spots in both the tested seagrasses. Further, the M-BPP method was successfully utilized in western-blot analysis of phosphoenolpyruvate carboxylase (PEPC-a key enzyme for carbon metabolism

Nonpoint Source: Marinas and Boating

EPA Pesticide Factsheets

Because marinas are located right at the water's edge, there is a strong potential for marina waters to become contaminated with pollutants generated from the various activities that occur at marinas—such as boat cleaning and fueling operations.

Influence of Sedimentary and Seagrass Microbial Communities on Shallow-Water Benthic Optical Properties

DTIC Science & Technology

2008-09-30

grass, Thalassia testudinum) and in Monterey Bay (eel grass, Zostera marina). Assess how the microbial community affects the flux of photons to and...optical properties and photosynthetic potential of the seagrasses Thalassia testudinum and Zostera marina”. The manuscript will be submitted to the...crystals in Thalassia from LSI. We have pursued this serendipitous discovery, and at the Estuarine Research Federation meeting this fall, we will

Wave Dissipation by Vegetation

DTIC Science & Technology

2011-09-01

Transect Length (m) Dominant Plant Species Average Wave Reduction (% per m) Wayne (1976) 20 Spartina alterniflora 3.6 20 Thalassia testudinum 2.1...sp., Avicennia marina 0.74 Bradley and Houser (2009) 39 Thalassia testudinum 0.77 Lövstedt and Larson (2010) over first 5-14 m of vegetation...Laminaria hyperborea Fonseca and Cahalan (1992) harvested Halodule wrightii, Syringodium filiforme, Thalassia testudinum, Zostera marina Parametric

BENTHIC MACROFAUNA-HABITAT ASSOCIATIONS IN WILLAPA BAY, WASHINGTON, USA

EPA Science Inventory

Estuary-wide benthic macrofauna-habitat associations in Willapa Bay, Washington, United States, were determined for 4 habitats (eelgrass [Zostera marina], Atlantic cordgrass [Spartina alterniflora], mud shrimp [Upogebia pugettensis], ghost shrimp [Neotrypaea californiensis]) in 1...

Development of an Efficient Protein Extraction Method Compatible with LC-MS/MS for Proteome Mapping in Two Australian Seagrasses Zostera muelleri and Posidonia australis

PubMed Central

Jiang, Zhijian; Kumar, Manoj; Padula, Matthew P.; Pernice, Mathieu; Kahlke, Tim; Kim, Mikael; Ralph, Peter J.

2017-01-01

The availability of the first complete genome sequence of the marine flowering plant Zostera marina (commonly known as seagrass) in early 2016, is expected to significantly raise the impact of seagrass proteomics. Seagrasses are marine ecosystem engineers that are currently declining worldwide at an alarming rate due to both natural and anthropogenic disturbances. Seagrasses (especially species of the genus Zostera) are compromised for proteomic studies primarily due to the lack of efficient protein extraction methods because of their recalcitrant cell wall which is rich in complex polysaccharides and a high abundance of secondary metabolites in their cells. In the present study, three protein extraction methods that are commonly used in plant proteomics i.e., phenol (P); trichloroacetic acid/acetone/SDS/phenol (TASP); and borax/polyvinyl-polypyrrolidone/phenol (BPP) extraction, were evaluated quantitatively and qualitatively based on two dimensional isoelectric focusing (2D-IEF) maps and LC-MS/MS analysis using the two most abundant Australian seagrass species, namely Zostera muelleri and Posidonia australis. All three tested methods produced high quality protein extracts with excellent 2D-IEF maps in P. australis. However, the BPP method produces better results in Z. muelleri compared to TASP and P. Therefore, we further modified the BPP method (M-BPP) by homogenizing the tissue in a modified protein extraction buffer containing both ionic and non-ionic detergents (0.5% SDS; 1.5% Triton X-100), 2% PVPP and protease inhibitors. Further, the extracted proteins were solubilized in 0.5% of zwitterionic detergent (C7BzO) instead of 4% CHAPS. This slight modification to the BPP method resulted in a higher protein yield, and good quality 2-DE maps with a higher number of protein spots in both the tested seagrasses. Further, the M-BPP method was successfully utilized in western-blot analysis of phosphoenolpyruvate carboxylase (PEPC—a key enzyme for carbon metabolism

Environmental and ecological changes associated with a marina.

PubMed

Rivero, Natalie K; Dafforn, Katherine A; Coleman, Melinda A; Johnston, Emma L

2013-01-01

Anthropogenic modifications to waterways are common and their ecological consequences must be understood to effectively conserve local biodiversity. The facilitation of recreational boating activities often requires substantial alteration of natural areas, however the environmental and ecological consequences of such alterations are rarely described in the scientific literature. In this study, ecological and physico-chemical conditions were investigated in a recreational boating marina, located inside a marine park on the south-east coast of Australia. Recruitment panels were deployed for 8 weeks both inside and outside the marina, and differences in the composition of the developing fouling communities were observed. The recruitment of taxa, which often have short-lived larvae, was increased inside the marina (bryozoans, spirorbids and sponges) while the recruitment of taxa, which often have longer-lived larvae, was reduced or absent (barnacles, solitary ascidians and non-spirorbid polychaetes). Differences were also observed in environmental conditions inside the marina cf. directly outside. The marina environment had higher turbidity, temperature and pH along with higher concentrations of lead and copper in suspended sediments, while flow rates and trapped sediment loads were reduced inside the marina. The differences observed in the study suggest that there may be marked environmental changes associated with marina developments. The potential ecological consequences of these changes should be a primary consideration during the planning process, particularly for developments in locations of notable ecological value.

BENTHIC MACROFAUNA-HABITAT RELATIONSHIPS IN WILLAPA BAY, WA

EPA Science Inventory

Benthic macrofauna-habitat relationships were determined estuary-wide in Willapa Bay, WA for four intertidal habitats ((1) eelgrass, Zostera marina, (2) Atlantic cordgrass, Spartina alterniflora, (3) ghost shrimp, Neotrypaea californiensis, (4) mud shrimp, Upogebia pugettensis) i...

NEKTON-HABITAT ASSOCIATIONS IN A PACIFIC NORTHWEST (USA) ESTUARY

EPA Science Inventory

Nekton−habitat associations were determined in Yaquina Bay, Oregon, United States, using a stratified-by-habitat, random, estuary-wide sampling design. Three habitats (intertidal eelgrass [Zostera marina], mud shrimp [Upogebia pugettensis], and ghost shrimp [Neotrypaea californie...

BENTHIC MACROFAUNAL ALIENS IN WILLAPA BAY

EPA Science Inventory

Benthic macrofaunal samples were collected at random stations in Willapa Bay, WA, in four habitats [eelgrass (Zostera marina), Atlantic cordgrass (Spartina alterniflora), mud shrimp (Upogebia pugettensis), ghost shrimp (Neotrypaea californiensis)] in 1996 and in seven habitats (Z...

Saint Marina: the protectress of nephrology.

PubMed

Eftychiadis, A C; Marketos, S G

1999-01-01

Saint virgin and martyr Marina (Margarita) of Antioch in Pisidia (255-270) is recognized as the patron saint of kidney sufferers and the protectress of nephrology. Beginning in the 13th century she heals in particular patients suffering from nephropathies, pregnant women having a difficult childbirth, barren women and sickly children. She protects the patients from every side effect and complication. Saint Marina is represented in hagiography as a victor, defeating the dragon satan, holding a hammer or a cross and wearing a belt around her back in the area of kidneys. According to writers, artists and sculptors the belt is the perceivable means of Saint Marina for the miraculous recovery from and healing of kidney diseases. Therefore, kidney sufferers and pregnant women put belts upon her relics for blessing and then wore them. From the Middle Ages and Renaissance and up to the contemporary period Saint Marina (Margarita) was considered the patron saint of kidney sufferers. Justifiably she is recognized by the modern medical world as the protectress of nephrology.

Comparing photophysiology of seagrasses in the Pacific Northwest: potential implications for species interactions - July 28, 2014

EPA Science Inventory

Physiological tolerances are a primary control on species interactions mediated through production and growth. We examined how the physiology of native eelgrass (Zostera marina L.) and introduced Japanese eelgrass (Z. japonica Aschers. & Graeb) responded to temperature in ord...

Comparing photophysiology of seagrasses in the Pacific Northwest: potential implications for species interactions

EPA Science Inventory

Physiological tolerances are a primary control on species interactions mediated through production and growth. We examined how the physiology of native eelgrass (Zostera marina L.) and introduced Japanese eelgrass (Z. japonica Aschers. & Graeb) responded to temperature in or...

Calculating bathymetric and spatial distributions of estuarine eelgrass

EPA Science Inventory

Distributions of native eelgrass Zostera marina L. within the intertidal and shallow subtidal zones of three Oregon estuaries (Tillamook, Yaquina, and Alsea) were classified from color infrared aerial orthophotography acquired at extreme low tide. Image processing software, Spati...

Saprobic analysis to Marina coastal, Semarang city

NASA Astrophysics Data System (ADS)

Nuriasih, D. M.; Anggoro, S.; Haeruddin

2018-02-01

Semarang city is one of coastal city in Indonesia, that antropogenic activities have impact to coastal of Semarang, including Marina beach. Therefore, it is important to study the quality of seawater related with antropogenic activities. The research purpose was to analyze the saprobic level of Marina beach as an indicator of marine pollution. This case study research used survey method. Purposive method was used for sampling the seawater at five stations at the beach. This research can be concluded that TSI (Tropic Saprobic Index) higher than standard that indicated the Marina Beach Seawaters polution at level of β - Mesosaprobic.

RELATIONSHIPS BETWEEN SEAGRASSES, BENTHIC MACROALGAE AND NUTRIENTS IN A PACIFIC NORTHWEST ESTUARY

EPA Science Inventory

Pacific Northwest estuaries are characterized by large tidal ranges (2-3 m) that routinely expose submerged aquatic vegetation (SAV) such as seagrass and benthic macroalgae. The dominant native seagrass in PNW estuaries is the eelgrass Zostera marina. However, in recent decades...

Will the balance of power shift among native eastern Pacific estuary ecosystem engineers with the introduced bopyrid isopod parasite orthione griffenis?

EPA Science Inventory

The blue mud shrimp, Upogebia pugettensis, the bay ghost shrimp, Neotrypaea californiensis, and eelgrass, Zostera marina are endemic ecosystem engineers that define the ecological structure and function of estuaries along the Pacific coast of the US as significantly as do marshes...

Sea Level Affecting Marshes Model (SLAMM)‐New Functionality for Predicting Changes in Distribution of Submerged Aquatic Vegetation in Response to Sea Level Rise.Version 1.0

EPA Science Inventory

Submerged aquatic vegetation (SAV) is an ecologically important habitat world-wide. In Pacific Northwest (PNW) estuaries, SAV in the lower intertidal and shallow subtidal habitats are dominated by the native seagrass, Zostera marina also referred to as submerged aquatic vegetati...

A DECADE OF MAPPING SUBMERGED AQUATIC VEGETATION USING COLOR INFRARED AERIAL PHOTOGRAPHY: METHODS USED AND LESSONS LEARNED - 5-14-2014

EPA Science Inventory

Annual color infrared (CIR) aerial photographs acquired annually between 1997 and 2007 were used to classify distributions of intertidal and shallow subtidal native eelgrass Zostera marina and non-indigenous dwarf eelgrass Z. japonica in lower Yaquina estuary, Oregon. The use of...

A DECADE OF MAPPING SUBMERGED AQUATIC VEGETATION USING COLOR INFRARED AERIAL PHOTOGRAPHY: METHODS USED AND LESSONS LEARNED

EPA Science Inventory

Annual color infrared aerial photographs acquired annually between 1997 and 2007 were used to classify distributions of intertidal and shallow subtidal native eelgrass Zostera marina and non-indigenous dwarf eelgrass Z. japonica in lower Yaquina estuary, Oregon. The use of digit...

Utilization Patterns of Intertidal Habitats by Birds in Yaquina Estuary, Oregon

EPA Science Inventory

Bird utilization patterns were assessed in five types of intertidal soft sediment and low marsh habitat in the Yaquina estuary, Oregon. Censuses were designed to determine the spatial and seasonal utilization patterns of birds in Zostera marina (eelgrass), Upogebia (mud shrimp)/...

Quantifying Patterns in Spatial and Temporal Distributions of Intertidal Native and Non-Indigenous Eelgrass in Yaquina Estuary, Oregon: 1997 – 2012

EPA Science Inventory

Intertidal native eelgrass Zostera marina and non-indigenous dwarf eelgrass Z. japonica in lower Yaquina estuary, Oregon were mapped between 1997 and 2012. Annual color infrared aerial photographs acquired annually between 1997 and 2007 were used to classify distributions of the...

Seagrass Planting Guidelines for the Pacific, Gulf, and Atlantic Coasts

DTIC Science & Technology

1984-04-01

widgeongrass (Ruppia maritima), shoalgrass (Halodule wrightii), and manatee- grass (Sgringodium filiforme). The fifth species, turtlegrass ( Thalassia ...Eelgrass 20-35 11LW to -2 m អ Spring Combination Very Good (Zostera marina) or cohesive * Note that turtlegrass ( Thalassia testudinum) is omitted

Nekton-habitat associations in Yaquina Bay, Oregon - March 2008

EPA Science Inventory

We conducted a 3-year field study to determine the relative nekton usage of 4 intertidal habitats (eelgrass [Zostera marina], mud shrimp [Upogebia pugettensis], ghost shrimp [Neotrypaea californiensis], and unvegetated sand) in Yaquina Bay, Oregon. Nekton samples were collected u...

33 CFR 80.1124 - Ventura Marina, CA.

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Ventura Marina, CA. 80.1124 Section 80.1124 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1124 Ventura Marina, CA. A line drawn from...

33 CFR 80.1124 - Ventura Marina, CA.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Ventura Marina, CA. 80.1124 Section 80.1124 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1124 Ventura Marina, CA. A line drawn from...

33 CFR 80.1124 - Ventura Marina, CA.

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Ventura Marina, CA. 80.1124 Section 80.1124 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1124 Ventura Marina, CA. A line drawn from...

33 CFR 80.1124 - Ventura Marina, CA.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Ventura Marina, CA. 80.1124 Section 80.1124 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1124 Ventura Marina, CA. A line drawn from...

33 CFR 80.1124 - Ventura Marina, CA.

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Ventura Marina, CA. 80.1124 Section 80.1124 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1124 Ventura Marina, CA. A line drawn from...

Latitudinal gradients in oceanic and watershed nitrogen sources to Pacific coast estuaries of North America

EPA Science Inventory

To assess the relative importance of terrestrial versus oceanic nutrient sources, we assembled natural abundance nitrogen stable isotope (δ15N) data for nitrate, green macroalgae, seagrass (Zostera marina) and mussels in the nearshore and in estuaries along the west coast o...

Characterization of Light and Nitrogen Regulated Gene Expression Pathways in Marine Diatoms

DTIC Science & Technology

1992-12-31

DNA and cDNA from the seagrass Zostera marina and marine unicellular chlorophyte Dunaliella tertiolecta, using oligonucleotide primers based on...availability of carbon skeletons from photosynthesis may also function in the modulation of gene expression in diatoms. FCP abundance did not exhibit any

Factors influencing carbon storage capacity of eelgrass meadows in New England

EPA Science Inventory

Seagrasses are known to accumulate and store large quantities of carbon although carbon accumulation and storage varies between and within meadows. In this study, we measured carbon accumulation and storage in sediments of 8 eelgrass (Zostera marina L.) meadows in New England an...

ESTIMATING DENSITIES OF ESTUARINE EELGRASS AND BENTHIC MACROALGAE VIA AERIAL PHOTOGRAPHY

EPA Science Inventory

The goal of this research was to distinguish meadows of native eelgrass (Zostera marina L.) from adjacent beds of benthic green macroalgae in the exposed intertidal zone of Pacific Northwest estuaries, using false-color near-infrared aerial photography. Aerial photographs of Yaq...

Predicting Change in Eelgrass Distribution Due to Sea Level Rise

EPA Science Inventory

The eelgrass species Zostera marina is the dominant estuarine seagrass on the Pacific Northwest coast of North America and provides important ecosystem services and functions. The loss of eelgrass bed acreage due to environmental pressures is of world-wide concern, yet predicted ...

Predicting change in eelgrass distribution due to sea level rise in three Pacific Northwest estuaries

EPA Science Inventory

The eelgrass species Zostera marina is the dominant estuarine seagrass on the Pacific Northwest coast of North America and provides important ecosystem services and functions. The loss of eelgrass bed acreage due to environmental pressures is of world-wide concern, yet predicted...

HABITAT VALUES FOR NEKTON AND BENTHIC MACROFAUNA IN PACIFIC NORTHWEST ESTUARIES

EPA Science Inventory

Habitat values for nekton in terms of mean number of species (S), abundance (A), and total biomass (B) were determined for 4 intertidal habitats in Yaquina Bay, OR: eelgrass (Zostera marina), mud shrimp (Upogebia pugettensis), ghost shrimp (Neotrypaea californiensis), and bare mu...

Spud Point Marina Breakwater, Bodega Bay, Sonoma County, California.

DTIC Science & Technology

1991-07-01

AD-A240 319 ~ MONITORING COMPLETED COASTAL PROJECTS PROGRAM MISCELLANEOUS PAPER CERC-91-5 0SPUD POINT MARINA BREAKWATER, BODEGA BAY SONOMA COUNTY , CALIFORNIA...SUBTITLE S. FUNDING NUMBERS Spud Point Marina Breakwater, Bodega Bay, Sonoma County , WU 22123 California 6. AUTHOR(S) Jonathan W. Lott 7. PERFORMING...of the harbor are also shown. The marina docks and shoreside facilities are oper- ated by Sonoma County . The breakwater and access channel are main

DESICCATION AND OTHER FACTORS AFFECTING THE UPPER INTERTIDAL DISTRIBUTION OF EELGRASS IN YAQUINA BAY, OR

EPA Science Inventory

Eelgrass (Zostera marina) in Pacific Northwest is primarily intertidal, yet little research has been done on what factors control its upper intertidal growth boundary. In July 2000 a two year study was initiated in Yaquina Bay (Newport, OR) to evaluate the effects of four factor...

BENTHIC AMPHIPOD COMMUNITY RESPONSE TO STRESS INDUCED BY ALGAL MATS IN A PACIFIC NORTHWEST ESTUARY

EPA Science Inventory

Amphipod, algal biomass and sediment samples were taken at two- to four-week intervals from June through December, 2000 along lines perpendicular to two transects in Yaquina Bay, OR, extending from within the Zostera marina bed at the river channel edge through intertidal burrowi...

AMPHIPOD COMMUNITY RESPONSE TO STRESS INDUCED BY ALGAL MATS IN A PACIFIC NORTHWEST ESTUARY

EPA Science Inventory

Amphipod, algal and sediment samples were taken at two- to four-week intervals from June through December, 2000 along two transects in Yaquina Bay, OR. The transects extended from within the Zostera marina bed at the river channel edge through intertidal burrowing shrimp ...

DOCUMENTING THE INTERTIDAL COMPONENT OF EELGRASS DISTRIBUTIONS IN PACIFIC NORTHWEST ESTUARIES USING COLOR INFRARED AERIAL PHOTOGRAPHY

EPA Science Inventory

The objective of this study was to develop and test a rapid, cost-effective method of mapping the intertidal (and surface-visible subtidal) distribution of eelgrass (Zostera marina L.) meadows and patches in the turbid coastal estuaries of the Pacific Northwest (PNW). Initial co...

Annual and seasonal temperature variance along an inter-tidal sediment transect in Yaquina bay, Oregon, 1999 - 2006

EPA Science Inventory

Sediment temperature was measured using submersible Onset TidbiT® recording thermistor thermometers at eelgrass (Zostera marina, Z. japonica) mid-rhizome root depth (~5 cm) at 6 stations on a transect from ~MLLW (mean lower low water) at the channel edge to near MHHW (mean higher...

NATURAL FACTORS CONTROLLING INTERTIDAL EELGRASS: IS T17THHIS AS HIGH AS WE CAN GET?

EPA Science Inventory

Eelgrass (Zostera marina) in many open-coast Pacific Northwest estuaries is primarily intertidal, yet little research has been done on the natural factors which control its upper intertidal growth boundary. In Dec. 2002 a two year study was completed in Yaquina Bay (Newport, OR)...

PECONIC ESTUARY: A PRELIMINARY ANALYSIS OF THE RELATIONSHIP BETWEEN SUBMARINE GROUNDWATER DISCHARGE (SDG) AND SUBMERGED AQUATIC VEGETATION IN THE PECONIC ESTUARY

EPA Science Inventory

Seagrass meadows represent an important ecosystem in tropic and temperate waters around the globe. The most common species in the shallow, coastal regions of the North Atlantic Ocean is Zostera marina, also referred to as eelgrass. In general, these marine angiosperms act as food...

Marine Phytophthora species can hamper conservation and restoration of vegetated coastal ecosystems.

PubMed

Govers, Laura L; Man In 't Veld, Willem A; Meffert, Johan P; Bouma, Tjeerd J; van Rijswick, Patricia C J; Heusinkveld, Jannes H T; Orth, Robert J; van Katwijk, Marieke M; van der Heide, Tjisse

2016-08-31

Phytophthora species are potent pathogens that can devastate terrestrial plants, causing billions of dollars of damage yearly to agricultural crops and harming fragile ecosystems worldwide. Yet, virtually nothing is known about the distribution and pathogenicity of their marine relatives. This is surprising, as marine plants form vital habitats in coastal zones worldwide (i.e. mangrove forests, salt marshes, seagrass beds), and disease may be an important bottleneck for the conservation and restoration of these rapidly declining ecosystems. We are the first to report on widespread infection of Phytophthora and Halophytophthora species on a common seagrass species, Zostera marina (eelgrass), across the northern Atlantic and Mediterranean. In addition, we tested the effects of Halophytophthora sp. Zostera and Phytophthora gemini on Z. marina seed germination in a full-factorial laboratory experiment under various environmental conditions. Results suggest that Phytophthora species are widespread as we found these oomycetes in eelgrass beds in six countries across the North Atlantic and Mediterranean. Infection by Halophytophthora sp. Zostera, P. gemini, or both, strongly affected sexual reproduction by reducing seed germination sixfold. Our findings have important implications for seagrass ecology, because these putative pathogens probably negatively affect ecosystem functioning, as well as current restoration and conservation efforts. © 2016 The Author(s).

Marine Phytophthora species can hamper conservation and restoration of vegetated coastal ecosystems

PubMed Central

Man in ‘t Veld, Willem A.; Meffert, Johan P.; Bouma, Tjeerd J.; van Rijswick, Patricia C. J.; Heusinkveld, Jannes H. T.; Orth, Robert J.; van Katwijk, Marieke M.; van der Heide, Tjisse

2016-01-01

Phytophthora species are potent pathogens that can devastate terrestrial plants, causing billions of dollars of damage yearly to agricultural crops and harming fragile ecosystems worldwide. Yet, virtually nothing is known about the distribution and pathogenicity of their marine relatives. This is surprising, as marine plants form vital habitats in coastal zones worldwide (i.e. mangrove forests, salt marshes, seagrass beds), and disease may be an important bottleneck for the conservation and restoration of these rapidly declining ecosystems. We are the first to report on widespread infection of Phytophthora and Halophytophthora species on a common seagrass species, Zostera marina (eelgrass), across the northern Atlantic and Mediterranean. In addition, we tested the effects of Halophytophthora sp. Zostera and Phytophthora gemini on Z. marina seed germination in a full-factorial laboratory experiment under various environmental conditions. Results suggest that Phytophthora species are widespread as we found these oomycetes in eelgrass beds in six countries across the North Atlantic and Mediterranean. Infection by Halophytophthora sp. Zostera, P. gemini, or both, strongly affected sexual reproduction by reducing seed germination sixfold. Our findings have important implications for seagrass ecology, because these putative pathogens probably negatively affect ecosystem functioning, as well as current restoration and conservation efforts. PMID:27559058

BROWN TIDE BIOASSAY: GROWTH OF AUREOCOCCUS ANOPHAGEFFERENS HARGRAVES ET SIEBURTH IN VARIOUS KNOWN TOXICANTS

EPA Science Inventory

This alga, occurring in Narragansett Bay, was responsible for wide-spread mortalities of populations of mussels and other shellfish (Tracey et al., 1988). t also was responsible for die-off of strands of the seagrass Zostera marina on Long Island in Creat South Bay and Peconic Ba...

Vessels, Marinas and Ports

EPA Pesticide Factsheets

An overview of EPA’s vessels (recreational/commercial/military), marinas, and ports programs and the regulatory (permits/rules) and non-regulatory approaches for addressing their associated environmental impacts, such as air and water pollution.

MARINA & MAINE STREETS FACING NW. DARKER COLORED HOME ON ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

MARINA & MAINE STREETS FACING NW. DARKER COLORED HOME ON SE CORNER. NYSTROM VILLAGE, LIKE ATCHISON VILLAGE (HAER CA-326-N), HOUSED WORKERS DURING WORLD WAR II - Rosie the Riveter National Historical Park, Nystrom Village, Marina & Maine Streets, Richmond, Contra Costa County, CA

North Pacific Spiny Dogfish (Squalus suckleyi) presence in Eelgrass habitat in the Salish Sea, Washington

Treesearch

Brooke E. Penaluna; Leo R. Bodensteiner

2015-01-01

Eelgrass (Zostera marina) is the dominant seagrass along the Pacific North American Coast, providing complex physical structure, high trophic productivity, and protection from predators (Phillips 1984; Simenstad 1994). Because of these multiple functions, many fish species and life stages use Eelgrass beds more than other nearshore habitat types (...

TOTAL DISSOLVED AND BIOAVAILABLE METALS AT LAKE TEXOMA MARINAS

EPA Science Inventory

Dissolved metals in water and total metals in sediments have been measured at marina areas in Lake Texoma during June 1999 to October 2001, and October 2001, respectively. The metals most often found in the highest concentrations in marina water were Na and Ca, followed by Mg an...

17. MARINA WAY, HARBOUR WAY, AND MARITIME CHILD DEVELOPMENT CENTER ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

17. MARINA WAY, HARBOUR WAY, AND MARITIME CHILD DEVELOPMENT CENTER (SEE ALSO HABS No. CA-2718), WITH RICHMOND SHIPYARD NO. 3. S. - Rosie the Riveter National Historical Park, 1401 Marina Way South, Richmond, Contra Costa County, CA

Expansion of the invasive dwarf eelgrass, Zostera japonica, in Yaquina Bay, Oregon

EPA Science Inventory

The areal coverage of the non-indigenous dwarf eelgrass, Zostera japonica, is increasing in several estuaries on the US West Coast. As a result, regulatory agencies in the states of California and Washington are considering methods of controlling its expansion. Factors relevan...

Biofilm Growth and Near-Infrared Radiation-Driven Photosynthesis of the Chlorophyll d-Containing Cyanobacterium Acaryochloris marina

PubMed Central

Behrendt, Lars; Schrameyer, Verena; Qvortrup, Klaus; Lundin, Luisa; Sørensen, Søren J.; Larkum, Anthony W. D.

2012-01-01

The cyanobacterium Acaryochloris marina is the only known phototroph harboring chlorophyll (Chl) d. It is easy to cultivate it in a planktonic growth mode, and A. marina cultures have been subject to detailed biochemical and biophysical characterization. In natural situations, A. marina is mainly found associated with surfaces, but this growth mode has not been studied yet. Here, we show that the A. marina type strain MBIC11017 inoculated into alginate beads forms dense biofilm-like cell clusters, as in natural A. marina biofilms, characterized by strong O2 concentration gradients that change with irradiance. Biofilm growth under both visible radiation (VIS, 400 to 700 nm) and near-infrared radiation (NIR, ∼700 to 730 nm) yielded maximal cell-specific growth rates of 0.38 per day and 0.64 per day, respectively. The population doubling times were 1.09 and 1.82 days for NIR and visible light, respectively. The photosynthesis versus irradiance curves showed saturation at a photon irradiance of Ek (saturating irradiance) >250 μmol photons m−2 s−1 for blue light but no clear saturation at 365 μmol photons m−2 s−1 for NIR. The maximal gross photosynthesis rates in the aggregates were ∼1,272 μmol O2 mg Chl d−1 h−1 (NIR) and ∼1,128 μmol O2 mg Chl d−1 h−1 (VIS). The photosynthetic efficiency (α) values were higher in NIR-irradiated cells [(268 ± 0.29) × 10−6 m2 mg Chl d−1 (mean ± standard deviation)] than under blue light [(231 ± 0.22) × 10−6 m2 mg Chl d−1]. A. marina is well adapted to a biofilm growth mode under both visible and NIR irradiance and under O2 conditions ranging from anoxia to hyperoxia, explaining its presence in natural niches with similar environmental conditions. PMID:22467501

Genetic evidence for monogamy in the dwarf seahorse, Hippocampus zosterae.

PubMed

Rose, Emily; Small, Clayton M; Saucedo, Hector A; Harper, Cristin; Jones, Adam G

2014-01-01

Syngnathid fishes (pipefishes, seahorses, and seadragons) exhibit a wide array of mating systems ranging from monogamy with long-term pair bonds to more promiscuous mating systems, such as polyandry and polygynandry. Some seahorses, including the dwarf seahorse Hippocampus zosterae, have been found to be socially monogamous. Although several seahorse species have also been shown to be genetically monogamous, parentage analysis has not yet been applied to the dwarf seahorse. We developed 8 novel microsatellites for the dwarf seahorse to conduct genetic parentage analysis to confirm that this species is indeed monogamous. Using 4 selected loci and a total of 16 pregnant male seahorses, with 8 collected in Florida and 8 sampled in Texas, we genotyped all of the offspring within each male's brood to determine the maternal contributions to each brood. We found a maximum of 4 alleles per locus segregating within each pregnant male's brood, a pattern consistent with each brood having exactly 1 mother and 1 father. These results support previous laboratory-based behavioral studies and indicate that the dwarf seahorse, H. zosterae, is genetically monogamous. © The American Genetic Association 2014. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Fine-scale spatial distribution of the common lugworm Arenicola marina, and effects of intertidal clam fishing

NASA Astrophysics Data System (ADS)

Boldina, Inna; Beninger, Peter G.

2014-04-01

Despite its ubiquity and its role as an ecosystem engineer on temperate intertidal mudflats, little is known of the spatial ecology of the lugworm Arenicola marina. We estimated lugworm densities and analyzed the spatial distribution of A. marina on a French Atlantic mudflat subjected to long-term clam digging activities, and compared these to a nearby pristine reference mudflat, using a combination of geostatistical techniques: point-pattern analysis, autocorrelation, and wavelet analysis. Lugworm densities were an order of magnitude greater at the reference site. Although A. marina showed an aggregative spatial distribution at both sites, the characteristics and intensity of aggregation differed markedly between sites. The reference site showed an inhibition process (regular distribution) at distances <7.5 cm, whereas the impacted site showed a random distribution at this scale. At distances from 15 cm to several tens of meters, the spatial distribution of A. marina was clearly aggregated at both sites; however, the autocorrelation strength was much weaker at the impacted site. In addition, the non-impacted site presented multi-scale spatial distribution, which was not evident at the impacted site. The differences observed between the spatial distributions of the fishing-impacted vs. the non-impacted site reflect similar findings for other components of these two mudflat ecosystems, suggesting common community-level responses to prolonged mechanical perturbation: a decrease in naturally-occurring aggregation. This change may have consequences for basic biological characteristics such as reproduction, recruitment, growth, and feeding.

Atlas of susceptibility to pollution in marinas. Application to the Spanish coast.

PubMed

Gómez, Aina G; Ondiviela, Bárbara; Fernández, María; Juanes, José A

2017-01-15

An atlas of susceptibility to pollution of 320 Spanish marinas is provided. Susceptibility is assessed through a simple, fast and low cost empirical method estimating the flushing capacity of marinas. The Complexity Tidal Range Index (CTRI) was selected among eleven empirical methods. The CTRI method was selected by means of statistical analyses because: it contributes to explain the system's variance; it is highly correlated to numerical model results; and, it is sensitive to marinas' location and typology. The process of implementation to the Spanish coast confirmed its usefulness, versatility and adaptability as a tool for the environmental management of marinas worldwide. The atlas of susceptibility, assessed through CTRI values, is an appropriate instrument to prioritize environmental and planning strategies at a regional scale. Copyright © 2016 Elsevier Ltd. All rights reserved.

Population Genetic Structure of the Dwarf Seahorse (Hippocampus zosterae) in Florida

PubMed Central

Fedrizzi, Nathan; Stiassny, Melanie L. J.; Boehm, J. T.; Dougherty, Eric R.; Amato, George; Mendez, Martin

2015-01-01

The dwarf seahorse (Hippocampus zosterae) is widely distributed throughout near-shore habitats of the Gulf of Mexico and is of commercial significance in Florida, where it is harvested for the aquarium and curio trades. Despite its regional importance, the genetic structure of dwarf seahorse populations remains largely unknown. As an aid to ongoing conservation efforts, we employed three commonly applied mtDNA markers (ND4, DLoop and CO1) to investigate the genetic structuring of H. zosterae in Florida using samples collected throughout its range in the state. A total of 1450 bp provided sufficient resolution to delineate four populations of dwarf seahorses, as indicated by significant fixation indices. Despite an overall significant population structure, we observed evidence of interbreeding between individuals from geographically distant sites, supporting the hypothesis that rafting serves to maintain a degree of population connectivity. All individuals collected from Pensacola belong to a single distinct subpopulation, which is highly differentiated from the rest of Floridian dwarf seahorses sampled. Our findings highlight the utility of mtDNA markers in evaluating barriers to gene flow and identifying genetically distinct populations, which are vital to the development of comprehensive conservation strategies for exploited taxa. PMID:26200110

Population Genetic Structure of the Dwarf Seahorse (Hippocampus zosterae) in Florida.

PubMed

Fedrizzi, Nathan; Stiassny, Melanie L J; Boehm, J T; Dougherty, Eric R; Amato, George; Mendez, Martin

2015-01-01

The dwarf seahorse (Hippocampus zosterae) is widely distributed throughout near-shore habitats of the Gulf of Mexico and is of commercial significance in Florida, where it is harvested for the aquarium and curio trades. Despite its regional importance, the genetic structure of dwarf seahorse populations remains largely unknown. As an aid to ongoing conservation efforts, we employed three commonly applied mtDNA markers (ND4, DLoop and CO1) to investigate the genetic structuring of H. zosterae in Florida using samples collected throughout its range in the state. A total of 1450 bp provided sufficient resolution to delineate four populations of dwarf seahorses, as indicated by significant fixation indices. Despite an overall significant population structure, we observed evidence of interbreeding between individuals from geographically distant sites, supporting the hypothesis that rafting serves to maintain a degree of population connectivity. All individuals collected from Pensacola belong to a single distinct subpopulation, which is highly differentiated from the rest of Floridian dwarf seahorses sampled. Our findings highlight the utility of mtDNA markers in evaluating barriers to gene flow and identifying genetically distinct populations, which are vital to the development of comprehensive conservation strategies for exploited taxa.

Polynuclear aromatic hydrocarbons in oyster tissue around three coastal marinas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marcus, J.M.; Stokes, T.P.

1985-12-01

Marinas present the potential for introduction of various pollutants into the surrounding waters such as coliform bacteria, primary pathogens, heavy metals, and petroleum hydrocarbons. Little data have been presented specifically addressing the effects of recreational marinas on petroleum hydrocarbon levels or, for that matter, other constituent levels in oysters near those marinas. In order to obtain such data, a comprehensive assessment of water and oyster quality around three coastal marinas was conducted by the South Carolina Department of Health and Environmental control (SCDHEC) during 1983. Polynuclear aromatic hydrocarbons (PAH) were selected as the petroleum hydrocarbon fraction of interest since theymore » are mainly of pyrogenic origin; have been shown to be the most toxic/carcinogenic fraction of oil; have been shown to affect the respiration and heart rates of mussels; and have been shown to be linked to neoplasia in clams and proliferative disorders in mussels. C. virginica was chosen as the mollusc of interest because of its widespread distribution in the estuaries of South Carolina, its importance as an economic and recreational resource, and its suitability as a sentinel organism for monitoring coastal pollution.« less

75 FR 4783 - Federal Consistency Appeal by Villa Marina Yacht Harbour, Inc.

Federal Register 2010, 2011, 2012, 2013, 2014

2010-01-29

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration Federal Consistency Appeal by Villa Marina Yacht Harbour, Inc. AGENCY: National Oceanic and Atmospheric Administration (NOAA... days, closure of the decision record in an administrative appeal filed by Villa Marina Yacht Harbour...

A Proximate Biological Survey of San Diego Bay, California

DTIC Science & Technology

1975-01-01

Ulothrlx sp. (green algae) Viva lattsslma (sea lettuce) Yucca schldlgera (Mohave yucca) Zostera marina (eelgrass) B. Marine Invertebrates Porifera...Technical Director ADMINISTRATIVE INFORMATION The work reported here was performed by the Marine Knvironmental Manage- ment Office of the Naval...from military sources, will be eliminated by 1980, (4) A number of marine organisms, including commercially and recreationally important species, are

Texture and composition of the Rosa Marina beach sands (Adriatic coast, southern Italy): a sedimentological/ecological approach

NASA Astrophysics Data System (ADS)

Moretti, Massimo; Tropeano, Marcello; Loon, A. J. (Tom) van; Acquafredda, Pasquale; Baldacconi, Rossella; Festa, Vincenzo; Lisco, Stefania; Mastronuzzi, Giuseppe; Moretti, Vincenzo; Scotti, Rosa

2016-06-01

Beach sands from the Rosa Marina locality (Adriatic coast, southern Italy) were analysed mainly microscopically in order to trace the source areas of their lithoclastic and bioclastic components. The main cropping out sedimentary units were also studied with the objective to identify the potential source areas of lithoclasts. This allowed to establish how the various rock units contribute to the formation of beach sands. The analysis of the bioclastic components allows to estimate the actual role of organisms regarding the supply of this material to the beach. Identification of taxa that are present in the beach sands as shell fragments or other remains was carried out at the genus or family level. Ecological investigation of the same beach and the recognition of sub-environments (mainly distinguished on the basis of the nature of the substrate and of the water depth) was the key topic that allowed to establish the actual source areas of bioclasts in the Rosa Marina beach sands. The sedimentological analysis (including a physical study of the beach and the calculation of some statistical parameters concerning the grain-size curves) shows that the Rosa Marina beach is nowadays subject to erosion.

Splenic immunotoxicity in developing cane toads (Rhinella marina) from Bermuda.

PubMed

Fort, Douglas J; Mathis, Michael; Fort, Chelsea E; Fort, Hayley M; Fort, Troy D; Linzey, Donald W; Bacon, Jamie P

2016-10-01

The impacts of contaminated sediment from 2 ponds in Bermuda on immune function in newly metamorphosed cane toads were examined. In the present study, a partial life-cycle experiment exposing Gosner stage 20 cane toad tadpoles to pond sediment and laboratory culture water through metamorphosis and into a juvenile state was performed. A basic immunology battery, including general necropsy, spleen somatic index, spleen white pulp content, splenocyte tissue density, and splenocyte viability, was conducted in newly metamorphosed Rhinella marina exposed to Bermuda freshwater sediment and baseline specimens collected from 2 separate populations in south Texas and south Florida, USA. Immune function was evaluated using a lymphocyte proliferation assay with subset specimens infected with Mycobacterium chelonae. In the Bermuda population exposed to pond sediment, splenocyte tissue density was markedly lower and lymphocyte proliferation substantially less relative to cohorts exposed to control sediment and to the North American populations. Considerable increases in spleen weight and liver and spleen lesions related to M. chelonae infection were recorded in challenged Bermuda R. marina compared with unchallenged specimens. Overall, immune function in Bermuda R. marina was compromised compared with North American mainland R. marina regardless of treatment but more dramatically in specimens exposed to Bermuda pond sediments. Environ Toxicol Chem 2016;35:2604-2612. © 2016 SETAC. © 2016 SETAC.

18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

Code of Federal Regulations, 2011 CFR

2011-04-01

... 18 Conservation of Power and Water Resources 2 2011-04-01 2011-04-01 false Marina sewage pump-out... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All pump... operating requirements: (a) Spill-proof connection with shipboard holding tanks; (b) Suction controls or...

18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

Code of Federal Regulations, 2012 CFR

2012-04-01

... 18 Conservation of Power and Water Resources 2 2012-04-01 2012-04-01 false Marina sewage pump-out... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All pump... operating requirements: (a) Spill-proof connection with shipboard holding tanks; (b) Suction controls or...

18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

Code of Federal Regulations, 2013 CFR

2013-04-01

... 18 Conservation of Power and Water Resources 2 2013-04-01 2012-04-01 true Marina sewage pump-out... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All pump... operating requirements: (a) Spill-proof connection with shipboard holding tanks; (b) Suction controls or...

18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

Code of Federal Regulations, 2014 CFR

2014-04-01

... 18 Conservation of Power and Water Resources 2 2014-04-01 2014-04-01 false Marina sewage pump-out... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All pump... operating requirements: (a) Spill-proof connection with shipboard holding tanks; (b) Suction controls or...

Effects of used lubricating oil on two mangroves Aegiceras corniculatum and Avicennia marina.

PubMed

Ye, Yong; Tam, N F Y

2007-01-01

An outdoor experiment was set up to investigate the effects of used lubricating oil (5 L/m2) on Aegiceras corniculatum Blanco. and Avicennia marina (Forsk) Vierh., two salt-excreting mangroves. A. marina was more sensitive to used lubricating oil than A. corniculatum and canopy-oiling resulted in more direct physical damage and stronger lethal effects than base-oiling. When treated with canopy-oiling, half of A. corniculatum plants survived for the whole treatment time (90 d); but, for A. marina, high mortality (83%) resulted from canopy-oiling within 3 weeks and no plants survived for 80 d. Base-oiling had no lethal effects onA. corniculatum plants even at the termination of this experiment, but 83% of A. marina plants died 80 d after treatment. Forty days after canopy-oiling, 93% of A. corniculatum leaves fell and no live leaves remained on A. marina plants. By the end of the experiment, base-oiling treatment resulted in about 45% of A. corniculatum leaves falling, while all A. marina leaves and buds were burned to die. Lubricating oil resulted in physiological damage to A. corniculatum leaves, including decreases in chlorophyll and carotenoid contents, nitrate reductase, peroxidase and superoxide dismutase activities, and increases in malonaldehyde contents. For both species, oil pollution significantly reduced leaf, root, and total biomass, but did not significantly affect stem biomass. Oil pollution resulted in damage to the xylem vessels of fine roots but not to those of mediate roots.

76 FR 37650 - Safety Zone; 4th of July Festival Berkeley Marina Fireworks Display Berkeley, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-28

...-AA00 Safety Zone; 4th of July Festival Berkeley Marina Fireworks Display Berkeley, CA AGENCY: Coast... the 4th of July Festival Berkeley Marina Fireworks Display. Unauthorized persons or vessels are... display. Background and Purpose The City of Berkeley Marina will sponsor the 4th of July Festival Berkeley...

Rapid assessment of the bryozoan, Zoobotryon verticillatum (Delle Chiaje, 1822) in marinas, Canary Islands.

PubMed

Minchin, Dan

2012-10-01

A rapid assessment, using the abundance and distribution range method, was used to evaluate the status of a large branching bryozoan, Zoobotryon verticillatum attached to the immersed part of marina pontoons in the Canary Islands. Colonies were also found attached to the hulls of leisure craft berthed alongside pontoons at three marinas in Lanzarote during 2012. Low levels of abundance and distribution of the bryozoan occurred in marinas with a freshwater influence whereas in a sheltered marina lacking direct freshwater inputs colonies occurred at ∼2 per metre of combined pontoon length. While the occurrence of this bryozoan is recent it may be expected to occur elsewhere in Macaronesia most probably spread by leisure craft. Copyright © 2012 Elsevier Ltd. All rights reserved.

Using Seeds to Propagate and Restore Vallisneria americana Michaux (Wild Celery) in the Chesapeake Bay

DTIC Science & Technology

2007-12-01

germination studies. In Seeds: Ecology , biogeography, and evolution of dormancy and germination, 5-26. London: Academic Press. Campbell, J. J. 2005...D., and C. W. Boylen. 1989. Eurasian watermilfoil seed ecology from an oligotrophic and eutrophic lake. J. Aquat. Plant Manage. 27:119-121...and S. Wyllie-Echeverria. 2005. Buoy-deployed seeding: Demonstration of a new eelgrass (Zostera marina L.) planting method. Ecological Engineering

A massive update of non-indigenous species records in Mediterranean marinas

PubMed Central

Bandi, Ada; Bertolino, Marco; Bogi, Cesare; Chatzigeorgiou, Giorgos; Çiçek, Burak Ali; Deidun, Alan; Ramos-Esplá, Alfonso; Koçak, Cengiz; Lorenti, Maurizio; Merlo, Guenda; Scribano, Giovanni

2017-01-01

The Mediterranean Sea is home to over 2/3 of the world’s charter boat traffic and hosts an estimated 1.5 million recreational boats. Studies elsewhere have demonstrated marinas as important hubs for the stepping-stone transfer of non-indigenous species (NIS), but these unique anthropogenic, and typically artificial habitats have largely gone overlooked in the Mediterranean as sources of NIS hot-spots. From April 2015 to November 2016, 34 marinas were sampled across the following Mediterranean countries: Spain, France, Italy, Malta, Greece, Turkey and Cyprus to investigate the NIS presence and richness in the specialized hard substrate material of these marina habitats. All macroinvertebrate taxa were collected and identified. Additionally, fouling samples were collected from approximately 600 boat-hulls from 25 of these marinas to determine if boats host diverse NIS not present in the marina. Here, we present data revealing that Mediterranean marinas indeed act as major hubs for the transfer of marine NIS, and we also provide evidence that recreational boats act as effective vectors of spread. From this wide-ranging geographical study, we report here numerous new NIS records at the basin, subregional, country and locality level. At the basin level, we report three NIS new to the Mediterranean Sea (Achelia sawayai sensu lato, Aorides longimerus, Cymodoce aff. fuscina), and the re-appearance of two NIS previously known but currently considered extinct in the Mediterranean (Bemlos leptocheirus, Saccostrea glomerata). We also compellingly update the distributions of many NIS in the Mediterranean Sea showing some recent spreading; we provide details for 11 new subregional records for NIS (Watersipora arcuata, Hydroides brachyacantha sensu lato and Saccostrea glomerata now present in the Western Mediterranean; Symplegma brakenhielmi, Stenothoe georgiana, Spirobranchus tertaceros sensu lato, Dendostrea folium sensu lato and Parasmittina egyptiaca now present in the

Mapping estuarine distributions of the non-indigenous Japanese Eelgrass Zostera japonica using Color Infrared Aerial Photography

EPA Science Inventory

This presentation describes a technique for mapping distributions of the nonindigenous Japanese eelgrass Zostera japonica in estuarine ecosystems of the Pacific Northwest. The relatively broad distribution of this intertidal plant, often on very soft substrate, makes classical g...

Occurrence and distribution of polycyclic aromatic hydrocarbons in surface sediments of San Diego Bay marinas.

PubMed

Neira, Carlos; Cossaboon, Jennifer; Mendoza, Guillermo; Hoh, Eunha; Levin, Lisa A

2017-01-15

Polycyclic aromatic hydrocarbons (PAHs) have garnered much attention due to their bioaccumulation, carcinogenic properties, and persistence in the environment. Investigation of the spatial distribution, composition, and sources of PAHs in sediments of three recreational marinas in San Diego Bay, California revealed significant differences among marinas, with concentrations in one site exceeding 16,000ngg -1 . 'Hotspots' of PAH concentration suggest an association with stormwater outfalls draining into the basins. High-molecular weight PAHs (4-6 rings) were dominant (>86%); the average percentage of potentially carcinogenic PAHs was high in all sites (61.4-70%) but ecotoxicological risks varied among marinas. Highly toxic benzo(a)pyrene (BaP) was the main contributor (>90%) to the total toxic equivalent quantity (TEQ) in marinas. PAHs in San Diego Bay marina sediments appear to be derived largely from pyrogenic sources, potentially from combustion products that reach the basins by aerial deposition and stormwater drainage from nearby streets and parking lots. Copyright © 2016 Elsevier Ltd. All rights reserved.

Seagrass feeding choices and digestive strategies of the herbivorous fish Sarpa salpa.

PubMed

Goldenberg, S U; Erzini, K

2014-05-01

This is the first study investigating the plant-herbivore interaction between Sarpa salpa, which has overgrazed seagrass transplants in Portugal, and the seagrasses Cymodocea nodosa, Zostera marina and Zostera noltii, which have been considered for restoration. When offered the choice between the three seagrasses in outdoor tanks, adult S. salpa clearly preferred Z. noltii. Testing the seagrasses separately, mean ± s.d. feeding rates ranged from 21 ± 11 g seagrass fresh mass kg⁻¹ fish mass day⁻¹ for Z. marina to 32 ± 9 g seagrass fresh mass kg⁻¹ fish mass day⁻¹ for C. nodosa and 40 ± 11 g seagrass fresh mass kg⁻¹ fish mass day⁻¹ for Z. noltii (temperature = 16° C). Food-processing rate in S. salpa did not differ between seagrasses, and there was no evidence of a regulation of processing rate according to food intake. Seagrasses differed substantially in nitrogen content and C:N, with C. nodosa containing the highest nitrogen content and lowest C:N (2·5 ± 0·1% and 14·0 ± 1·0), followed by Z. noltii (2·1 ± 0·1% and 17·0 ± 1·0) and Z. marina (1·4 ± 0·1% and 26·0 ± 2·0). Food-processing rate in S. salpa and the nutritional value of the seagrasses were not correlated with the observed feeding preference and rate. The study suggests that C. nodosa and Z. marina are less at risk of overgrazing by S. salpa and might thus be preferable to Z. noltii for seagrass restoration in areas with noticeable abundances of this fish. © 2014 The Fisheries Society of the British Isles.

Complete genome of Cobetia marina JCM 21022T and phylogenomic analysis of the family Halomonadaceae

NASA Astrophysics Data System (ADS)

Tang, Xianghai; Xu, Kuipeng; Han, Xiaojuan; Mo, Zhaolan; Mao, Yunxiang

2018-03-01

Cobetia marina is a model proteobacteria in researches on marine biofouling. Its taxonomic nomenclature has been revised many times over the past few decades. To better understand the role of the surface-associated lifestyle of C. marina and the phylogeny of the family Halomonadaceae, we sequenced the entire genome of C. marina JCM 21022T using single molecule real-time sequencing technology (SMRT) and performed comparative genomics and phylogenomics analyses. The circular chromosome was 4 176 300 bp with an average GC content of 62.44% and contained 3 611 predicted coding sequences, 72 tRNA genes, and 21 rRNA genes. The C. marina JCM 21022T genome contained a set of crucial genes involved in surface colonization processes. The comparative genome analysis indicated the significant differences between C. marina JCM 21022T and Cobetia amphilecti KMM 296 (formerly named C. marina KMM 296) resulted from sequence insertions or deletions and chromosomal recombination. Despite these differences, pan and core genome analysis showed similar gene functions between the two strains. The phylogenomic study of the family Halomonadaceae is reported here for the first time. We found that the relationships were well resolved among every genera tested, including Chromohalobacter, Halomonas, Cobetia, Kushneria, Zymobacter, and Halotalea.

Complete genome of Cobetia marina JCM 21022T and phylogenomic analysis of the family Halomonadaceae

NASA Astrophysics Data System (ADS)

Tang, Xianghai; Xu, Kuipeng; Han, Xiaojuan; Mo, Zhaolan; Mao, Yunxiang

2016-09-01

Cobetia marina is a model proteobacteria in researches on marine biofouling. Its taxonomic nomenclature has been revised many times over the past few decades. To better understand the role of the surface-associated lifestyle of C. marina and the phylogeny of the family Halomonadaceae, we sequenced the entire genome of C. marina JCM 21022T using single molecule real-time sequencing technology (SMRT) and performed comparative genomics and phylogenomics analyses. The circular chromosome was 4 176 300 bp with an average GC content of 62.44% and contained 3 611 predicted coding sequences, 72 tRNA genes, and 21 rRNA genes. The C. marina JCM 21022T genome contained a set of crucial genes involved in surface colonization processes. The comparative genome analysis indicated the significant diff erences between C. marina JCM 21022T and Cobetia amphilecti KMM 296 (formerly named C. marina KMM 296) resulted from sequence insertions or deletions and chromosomal recombination. Despite these diff erences, pan and core genome analysis showed similar gene functions between the two strains. The phylogenomic study of the family Halomonadaceae is reported here for the first time. We found that the relationships were well resolved among every genera tested, including Chromohalobacter, Halomonas, Cobetia, Kushneria, Zymobacter, and Halotalea.

Heavy metals in oyster tissue around three coastal marinas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marcus, J.M.; Thompson, A.M.

1986-04-01

The past decade has presented an unprecedented period of growth and development along the coastline of South Carolina. The majority of this development has been to serve the recreation and tourism industry and, as such, has included the construction of numerous recreational marinas in the coastal waters of the State. Various plans have been presented for the siting of marinas in pristine estuarine waters. This has raised much concern due to the possible impacts of such development on the plentiful oyster resource found in those waters. Marinas present the potential for the introduction of pollutants such as heavy metals intomore » the surrounding waters. This investigation was conducted by the South Carolina Department of Health and Environmental Control (SCDHEC) during 1983, and yielded a multifaceted data base composed of physiocochemical and bacteriological analyses from water, chemical analyses from sediment and chemical/bacteriological physiological analyses from the American oyster, Crassostrea virginica (Gmelin). C. virginica was chosen as the organism of interest due to its wide distribution in the estuaries of South Carolina, its importance as an economic and recreational resource and its suitability as a sentinel organism for monitoring coastal pollution.« less

Waves in Seagrass Systems: Review and Technical Recommendations

DTIC Science & Technology

2006-11-01

species (e.g., Halodule wrightii, Thalassia testudinum) are found near the sediment surface while other seagrass species (e.g., Zostera marina, Ruppia...309. Almasi, M. N., C. M. Hoskin, J. K. Reed, and J. Milo. 1987. Effects of natural and artificial Thalassia on rates of sedimentation. Journal of...Florida, St. Petersburg, FL, 123 pp. Koch, E. W. 1994. Hydrodynamics, diffusion boundary layers and photosynthesis of the seagrasses Thalassia testudinum

Effects of Temperature, Salinity and Seed Age on Induction of Zostera japonica Germination in North America, USA

EPA Science Inventory

Seagrasses can colonize unstructured mudflats either through clonal growth or seed germination and survival. Zostera japonica is an introduced seagrass in North America that has rapidly colonized mudflats along the Pacific Coast, leading to active management of the species. Gro...

Antifouling paint booster biocides (Irgarol 1051 and diuron) in marinas and ports of Bushehr, Persian Gulf.

PubMed

Saleh, Abolfazl; Molaei, Saeideh; Sheijooni Fumani, Neda; Abedi, Ehsan

2016-04-15

In the present study, antifouling paint booster biocides, Irgarol 1051 and diuron were measured in ports and marinas of Bushehr, Iran. Results showed that in seawater samples taken from ports and marinas, Irgarol was found at the range of less than LOD to 63.4ngL(-1) and diuron was found to be at the range of less than LOD to 29.1ngL(-1) (in Jalali marina). 3,4-dichloroaniline (3,4-DCA), as a degradation product of diuron, was also analyzed and its maximum concentration was 390ngL(-1). Results for analysis of Irgarol 1051 in sediments showed a maximum concentration of 35.4ngg(-1) dry weight in Bandargah marina. A comparison between the results of this study and those of other published works showed that Irgarol and diuron pollutions in ports and marinas of Bushehr located in the Persian Gulf were less than the average of reports from other parts of the world. Copyright © 2016 Elsevier Ltd. All rights reserved.

Antifouling biocides in German marinas: Exposure assessment and calculation of national consumption and emission.

PubMed

Daehne, Dagmar; Fürle, Constanze; Thomsen, Anja; Watermann, Burkard; Feibicke, Michael

2017-09-01

The authorization of biocidal antifouling products for leisure boats is the subject of the European Union Biocides Regulation 528/2012. National specifics may be regarded by the member states in their assessment of environmental risks. The aim of this survey was to collect corresponding data and to create a database for the environmental risk assessment of antifouling active substances in German surface waters. Water concentrations of current antifouling active substances and selected breakdown products were measured in a single-sampling campaign covering 50 marinas at inland and coastal areas. Increased levels were found for Zn, Cu, and cybutryne. For the latter, the maximum allowable concentration according to Directive 2013/39/EU was exceeded at 5 marinas. For Cu, local environmental quality standards were exceeded at 10 marinas. Base data on the total boat inventory in Germany were lacking until now. For that reason, a nationwide survey of mooring berths was conducted by use of aerial photos. About 206 000 mooring berths obviously used by boats with a potential antifouling application were counted. The blind spot of very small marinas was estimated at 20 000 berths. Seventy-one percent of berths were located at freshwater sites, illustrating the importance of navigable inland waterways for leisure boat activities and underlining the need for a customized exposure assessment in these areas. Moreover, the national consumption of all antifouling products for leisure boats was calculated. The total amount of 794 tonnes/annum (t/a) consisted of 179 t/a of inorganic Cu compounds, 19 t/a of organic cobiocides, and 49.5 t/a of Zn. With regard to weight proportion, 141 t/a Cu and 40 t/a Zn were consumed. Assuming an emission ratio of 50% during service life, 70.5 t/a of Cu amounted to 15% of all external sources for Cu release to German surface waters. These figures highlight the need for mitigation measures. Integr Environ Assess Manag 2017;13:892-905. © 2017 The

Chapter F. The Loma Prieta, California, Earthquake of October 17, 1989 - Marina District

USGS Publications Warehouse

O'Rourke, Thomas D.

1992-01-01

During the earthquake, a total land area of about 4,300 km2 was shaken with seismic intensities that can cause significant damage to structures. The area of the Marina District of San Francisco is only 4.0 km2--less than 0.1 percent of the area most strongly affected by the earthquake--but its significance with respect to engineering, seismology, and planning far outstrips its proportion of shaken terrain and makes it a centerpiece for lessons learned from the earthquake. The Marina District provides perhaps the most comprehensive case history of seismic effects at a specific site developed for any earthquake. The reports assembled in this chapter, which provide an account of these seismic effects, constitute a unique collection of studies on site, as well as infrastructure and societal, response that cover virtually all aspects of the earthquake, ranging from incoming ground waves to the outgoing airwaves used for emergency communication. The Marina District encompasses the area bounded by San Francisco Bay on the north, the Presidio on the west, and Lombard Street and Van Ness Avenue on the south and east, respectively. Nearly all of the earthquake damage in the Marina District, however, occurred within a considerably smaller area of about 0.75 km2, bounded by San Francisco Bay and Baker, Chestnut, and Buchanan Streets. At least five major aspects of earthquake response in the Marina District are covered by the reports in this chapter: (1) dynamic site response, (2) soil liquefaction, (3) lifeline performance, (4) building performance, and (5) emergency services.

Entamoeba marina n. sp.; a New Species of Entamoeba Isolated from Tidal Flat Sediment of Iriomote Island, Okinawa, Japan.

PubMed

Shiratori, Takashi; Ishida, Ken-Ichiro

2016-05-01

The genus Entamoeba includes anaerobic lobose amoebae, most of which are parasites of various vertebrates and invertebrates. We report a new Entamoeba species, E. marina n. sp. that was isolated from a sample of tidal flat sediment collected at Iriomote Island, Okinawa, Japan. Trophozoites of E. marina were 12.8-32.1 μm in length and 6.8-15.9 μm in width, whereas the cysts were 8.9-15.8 μm in diam. and contained four nuclei. The E. marina cells contained a rounded nucleus with a small centric karyosome and uniformly arranged peripheral chromatin. Although E. marina is morphologically indistinguishable from other tetranucleated cyst-forming Entamoeba species, E. marina can be distinguished from them based on the combination of molecular phylogenetic analyses using SSU rDNA gene and the difference of collection sites. Therefore, we propose E. marina as a new species of the genus Entamoeba. © 2015 The Author(s) Journal of Eukaryotic Microbiology © 2015 International Society of Protistologists.

Development and validation of a habitat suitability model for the non-indigenous seagrass Zostera japonica in North America

EPA Science Inventory

We developed a spatially-explicit, flexible 3-parameter habitat suitability model that can be used to identify and predict areas at higher risk for non-native dwarf eelgrass (Zostera japonica) invasion. The model uses simple environmental parameters (depth, nearshore slope, and s...

Structural heterogeneity leads to functional homogeneity in A. marina phycocyanin.

PubMed

Bar-Zvi, Shira; Lahav, Avital; Harris, Dvir; Niedzwiedzki, Dariusz M; Blankenship, Robert E; Adir, Noam

2018-07-01

The major light harvesting antenna in all cyanobacterial species is the phycobilisome (PBS). The smallest PBS identified to date is that of Acaryochloris marina (A. marina), composed of a single four-hexamer rod. We have determined the crystal structure of phycocyanin (AmPC), the major component of the A. marina PBS (AmPBS) to 2.1 Å. The basic unit of the AmPC is a heterodimer of two related subunits (α and β), and we show that the asymmetric unit contains a superposition of two α and two β isoforms, the products of the simultaneous expression of different genes. This is the first time to our knowledge that isolated proteins crystallized with such identifiable heterogeneity. We believe that the presence of the different isoforms allows the AmPBS to have a significant bathochromic shift in its fluorescence emission spectrum, allowing, in the total absence of allophycocyanin, a better overlap with absorption of the chlorophyll d-containing reaction centers. We show that this bathochromic shift exists in intact AmPBS as well as in its disassembled components, thus suggesting that AmPC can efficiently serve as the AmPBS terminal emitter. Copyright © 2018 Elsevier B.V. All rights reserved.

18 CFR 1304.404 - Commercial marina harbor limits.

Code of Federal Regulations, 2010 CFR

2010-04-01

... facilities at the dock, navigation and flood control requirements, optimum use of lands and land rights owned... to, changes in the ownership of the land base supporting the marina. ... harbor areas are determined by the extent of land rights held by the dock operator. The lakeward limits...

Physiological Responses of Oxyrrhis marina to the Altered Fatty Acid Composition of Virally Infected Emiliania huxleyi

NASA Astrophysics Data System (ADS)

Goode, A.; Fields, D.; Martinez-Martinez, J.

2016-02-01

Emiliania huxleyi is a coccolithophore that forms some of the largest phytoplankton blooms in the ocean. E. huxleyi abundance, distribution, and composition of essential fatty acids make them a key component in marine food webs. E. huxleyi-specific viruses have been shown to control the bloom duration and change the lipid composition of E. huxleyi cells. Alteration of essential fatty acids at the base of the food web may have downstream effects on trophic interactions. Oxyrrhis marina has been studied extensively, and is used as a micrograzer model organism. We investigated differential physiological responses of O. marina to a diet ( 100:1 prey:predator ratio) of virallyinfected versus uninfected E. huxleyi cells over a maximum 7-day period. Our results showed higher O. marina grazing rates on uninfected cells (p<0.05). However, O. marina had faster growth rates (p<0.05) and a smaller relative increase in saturated fatty acids and decrease in monounsaturated fatty acids (p<0.05) when fed infected E. huxleyi cells. This suggests a higher nutritional value of infected cells and/or better assimilation by O. marina of infected cells' carbon. In the marine environment this would translate into larger carbon transport to higher trophic levels when blooms become infected.

Rocking the Boat: Damage to Eelgrass by Swinging Boat Moorings.

PubMed

Unsworth, Richard K F; Williams, Beth; Jones, Benjamin L; Cullen-Unsworth, Leanne C

2017-01-01

Seagrass meadows commonly reside in shallow sheltered embayments typical of the locations that provide an attractive option for mooring boats. Given the potential for boat moorings to result in disturbance to the seabed due to repeated physical impact, these moorings may present a significant threat to seagrass meadows. The seagrass Zostera marina (known as eelgrass) is extensive across the northern hemisphere, forming critical fisheries habitat and creating efficient long-term stores of carbon in sediments. Although boat moorings have been documented to impact seagrasses, studies to date have been conducted on the slow growing Posidonia species' rather than the fast growing and rapidly reproducing Z. marina that may have a higher capacity to resist and recover from repeated disturbance. In the present study we examine swinging chain boat moorings in seagrass meadows across a range of sites in the United Kingdom to determine whether such moorings have a negative impact on the seagrass Zostera marina at the local and meadow scale. We provide conclusive evidence from multiple sites that Z. marina is damaged by swinging chain moorings leading to a loss of at least 6 ha of United Kingdom seagrass. Each swinging chain mooring was found to result in the loss of 122 m 2 of seagrass. Loss is restricted to the area surrounding the mooring and the impact does not appear to translate to a meadow scale. This loss of United Kingdom seagrass from boat moorings is small but significant at a local scale. This is because it fragments existing meadows and ultimately reduces their resilience to other stressors. Boat moorings are prevalent in seagrass globally and it is likely this impairs their ecosystem functioning. Given the extensive ecosystem service value of seagrasses in terms of factors such as carbon storage and fish habitat such loss is of cause for concern. This indicates the need for the widespread use of seagrass friendly mooring systems in and around seagrass.

Rocking the Boat: Damage to Eelgrass by Swinging Boat Moorings

PubMed Central

Unsworth, Richard K. F.; Williams, Beth; Jones, Benjamin L.; Cullen-Unsworth, Leanne C.

2017-01-01

Seagrass meadows commonly reside in shallow sheltered embayments typical of the locations that provide an attractive option for mooring boats. Given the potential for boat moorings to result in disturbance to the seabed due to repeated physical impact, these moorings may present a significant threat to seagrass meadows. The seagrass Zostera marina (known as eelgrass) is extensive across the northern hemisphere, forming critical fisheries habitat and creating efficient long-term stores of carbon in sediments. Although boat moorings have been documented to impact seagrasses, studies to date have been conducted on the slow growing Posidonia species’ rather than the fast growing and rapidly reproducing Z. marina that may have a higher capacity to resist and recover from repeated disturbance. In the present study we examine swinging chain boat moorings in seagrass meadows across a range of sites in the United Kingdom to determine whether such moorings have a negative impact on the seagrass Zostera marina at the local and meadow scale. We provide conclusive evidence from multiple sites that Z. marina is damaged by swinging chain moorings leading to a loss of at least 6 ha of United Kingdom seagrass. Each swinging chain mooring was found to result in the loss of 122 m2 of seagrass. Loss is restricted to the area surrounding the mooring and the impact does not appear to translate to a meadow scale. This loss of United Kingdom seagrass from boat moorings is small but significant at a local scale. This is because it fragments existing meadows and ultimately reduces their resilience to other stressors. Boat moorings are prevalent in seagrass globally and it is likely this impairs their ecosystem functioning. Given the extensive ecosystem service value of seagrasses in terms of factors such as carbon storage and fish habitat such loss is of cause for concern. This indicates the need for the widespread use of seagrass friendly mooring systems in and around seagrass. PMID

Contaminant loading to Puget Sound from two marinas. Puget Sound estuary program. Final report, June 1988-October 1988

DOE Office of Scientific and Technical Information (OSTI.GOV)

Crecelius, E.A.; Fortman, T.J.; Kiesser, S.L.

1989-07-01

Concentrations of Cu, Pb, Zn, PAH's, TBT and FC bacteria were measured in surface sediment, sediment-trap, and water-column samples at two marinas in Puget Sound during summer of 1988. Levels of contaminants inside the marinas were compared with levels outside. TBT had greatest elevation in marina sediments compared to reference sediments. Few of sediments exceeded Puget Sound AET sediment quality values but most did exceed PSDDA screening levels for in-water disposal of dredged sediment. All marinas estimated to contribute less than one percent of total mass loading of Cu, Pb and Zn to main basin of Puget Sound. Contribution ofmore » TBT may be much more significant if antifouling paints are the major source for Puget Sound.« less

Leaf miner-induced morphological, physiological and molecular changes in mangrove plant Avicennia marina (Forsk.) Vierh.

PubMed

Chen, Juan; Shen, Zhi-Jun; Lu, Wei-Zhi; Liu, Xiang; Wu, Fei-Hua; Gao, Gui-Feng; Liu, Yi-Ling; Wu, Chun-Sheng; Yan, Chong-Ling; Fan, Hang-Qing; Zhang, Yi-Hui; Zheng, Hai-Lei; Tsai, Chung-Jui

2017-01-31

Avicennia marina (Forsk.) Vierh is a widespread mangrove species along the southeast coasts of China. Recently, the outbreak of herbivorous insect, Phyllocnistis citrella Stainton, a leaf miner, have impacted on the growth of A. marina. Little is reported about the responses of A. marina to leaf miner infection at the biochemical, physiological and molecular levels. Here, we reported the responses of A. marina to leaf miner infection from the aspects of leaf structure, photosynthesis, and antioxidant system and miner responsive genes expression. A. marina leaves attacked by the leaf miner exhibited significant decreases in chlorophyll, carbon and nitrogen contents, as well as a decreased photosynthetic rate. Scanning and transmission electron microscopic observations revealed that the leaf miner only invaded the upper epidermis and destroyed the epidermal cell, which lead to the exposure of salt glands. In addition, the chloroplasts of mined leaves (ML) were swollen and the thylakoids degraded. The maximal net photosynthetic rate, stomatal conductance (Gs), carboxylation efficiency (CE), dark respiration (Rd), light respiration (Rp) and quantum yields (AQE) significantly decreased in the ML, whereas the light saturation point (Lsp), light compensation point (Lcp), water loss and CO2 compensation point (Г) increased in the ML. Moreover, chlorophyll fluorescence features also had been changed by leaf miner attacks. Interestingly, higher generation rate of O2ˉ· and lower antioxidant enzyme expression in the mined portion (MP) were found; on the contrary, higher H2O2 level and higher antioxidant enzyme expression in the non-mined portion (NMP) were revealed, implying that the NMP may be able to sense that the leaf miner attacks had happened in the MP of the A. marina leaf via H2O2 signaling. Besides, the protein expression of glutathione S-transferase (GST) and the glutathione (GSH) content were increased in the ML. In addition, insect resistance-related gene

PRODUCTION ECOLOGY OF THE NON-INDIGENOUS SEAGRASS, DWARF EELGRASS (ZOSTERA JAPONICA ASCHER. & GRAEB.), IN A PACIFIC NORTHWEST ESTUARY, USA

EPA Science Inventory

The non-indigenous seagrass Zostera japonica Ascher. & Graeb. (dwarf eelgrass) was first identified in central Oregon (USA) estuaries about 30 years ago. The autecology of this species is poorly described at the southern end of its non-native range although several process orien...

Understanding the Ecoydrology of Mangroves: A Simple SPAC Model for Avicennia Marina

NASA Astrophysics Data System (ADS)

Perri, Saverio; Viola, Francesco; Valerio Noto, Leonardo; Molini, Annalisa

2015-04-01

Mangroves represent one of the most carbon-rich ecosystems in the Tropics, noticeably impacting ecosystem services and the economy of these regions. Whether the ability of mangroves to exclude and tolerate salt has been extensively investigated in the literature - both from the structural and functional point of view - their eco-hydrological characteristics remains largely understudied, despite the crucial link with productivity, efficient carbon storage and fluxes. In this contribution we develop a "first-order" Soil Plant Atmosphere Continuum model for Avicennia Marina, a mangrove able to adapt to hyper-arid intertidal zones and characterized by complex morphological and eco-physiological traits. Among mangroves, Avicennia marina is one of the most tolerant to salinity and arid climatic conditions. Our model, based on a simple macroscopic approach, takes into account the specific characteristics of the mangrove ecosystem and in particular, the salinity of the water in the soil and the levels of salt stress to which the plant may be subjected. Mangrove transpiration is hence obtained by solving the plant and leaf water balance and the leaf energy balance, taking explicitly into account the role of osmotic water potential and salinity in governing plant resistance to water fluxes. The SPAC model of Avicennia is hence tested against experimental data obtained from the literature, showing the reliability and effectiveness of this minimalist model in reproducing observed transpiration fluxes. Finally, sensitivity analysis is used to assess whether uncertainty on the adopted parameters could lead to significant errors in the transpiration assessment.

Isolation and characterization of a marine algicidal bacterium against the harmful raphidophyceae Chattonella marina.

PubMed

Kim, Yun Sook; Lee, Dae-Sung; Jeong, Seong-Yun; Lee, Woe Jae; Lee, Myung-Suk

2009-02-01

A bacterial strain named AB-4 showing algicidal activity against Chattonella marina was isolated from coastal water of ULjin, Republic of Korea. The isolated strain was identified as Bacillus sp. by culture morphology, biochemical reactions, and homology research based on 16S rDNA. The bacterial culture led to the lysis of algal cells, suggesting that the isolated strain produced a latent algal-lytic compound. Amongst changes in algicidal activity by different culture filtrate volumes, the 10% (100 microl/ml) concentration showed the biggest change in algicidal activity; there, estimated algicidal activity was 95%. The swimming movements of Chattonella marina cells were inhibited because of treatment of the bacterial culture; subsequently, Chattonella marina cells became swollen and rounded. With longer exposure time, algal cells were disrupted and cellular components lost their integrity and decomposed. The released algicide(s) were heat-tolerant and stable in pH variations, except pH 3, 4, and 5. Culture filtrate of Bacillus sp. AB-4 was toxic against harmful algae bloom (HAB) species and nontoxic against livefood organisms. Bacillus sp. AB-4 showed comparatively strong activity against Akashiwo sanguinea, Fibriocapsa japonica, Heterosigma akashiwo, and Scrippsiella trochoidea. These results suggest that the algicidal activity of Bacillus sp. AB-4 is potentially useful for controlling outbreaks of Chattonella marina.

The utilization of false color aerial photography for macrophyte biomass estimation in the Oosterschelde (the Netherlands)

NASA Astrophysics Data System (ADS)

Meulstee, C.; Vanstokkom, H.

1985-01-01

The correlation between the biomass of sea grass and seaweed samples in a sidebranch of the Oosterschelde delta (Netherlands) and density ratios of this area on color infrared aerial photographs was investigated. As the Oosterschelde will become more divided from the North Sea after pier dam completion, an increase of macrophytes is expected. In an area where the weeds Ulva, Cheatomorpha, Entermorpha, Cladophora, Fucus vesuculosis, and the grasses Zostera noltii and Zostera marina are found, 53 biomass samples of a 0.054 sq m surface each were collected. The relation between covering degree and biomass was estimated. Using a transmission-densitometer adjusted to 3 to 1 mm, densities on 1:10,000 and 1:20,000 scale photographs were measured. A gage line was determined in a density-biomass diagram. The method is shown to be useful for an efficient, accurate biomass determination in the Oosterschelde.

Modelling reveals endogenous osmotic adaptation of storage tissue water potential as an important driver determining different stem diameter variation patterns in the mangrove species Avicennia marina and Rhizophora stylosa.

PubMed

Vandegehuchte, Maurits W; Guyot, Adrien; Hubeau, Michiel; De Swaef, Tom; Lockington, David A; Steppe, Kathy

2014-09-01

Stem diameter variations are mainly determined by the radial water transport between xylem and storage tissues. This radial transport results from the water potential difference between these tissues, which is influenced by both hydraulic and carbon related processes. Measurements have shown that when subjected to the same environmental conditions, the co-occurring mangrove species Avicennia marina and Rhizophora stylosa unexpectedly show a totally different pattern in daily stem diameter variation. Using in situ measurements of stem diameter variation, stem water potential and sap flow, a mechanistic flow and storage model based on the cohesion-tension theory was applied to assess the differences in osmotic storage water potential between Avicennia marina and Rhizophora stylosa. Both species, subjected to the same environmental conditions, showed a resembling daily pattern in simulated osmotic storage water potential. However, the osmotic storage water potential of R. stylosa started to decrease slightly after that of A. marina in the morning and increased again slightly later in the evening. This small shift in osmotic storage water potential likely underlaid the marked differences in daily stem diameter variation pattern between the two species. The results show that in addition to environmental dynamics, endogenous changes in the osmotic storage water potential must be taken into account in order to accurately predict stem diameter variations, and hence growth.

Photosystem Trap Energies and Spectrally-Dependent Energy-Storage Efficiencies in the Chl d-Utilizing Cyanobacterium, Acaryochloris Marina

NASA Technical Reports Server (NTRS)

Mielke, Steven P.; Kiang, Nancy Y.; Blankenship, Robert E.; Mauzerall, David

2012-01-01

Acaryochloris marina is the only species known to utilize chlorophyll (Chl) d as a principal photopigment. The peak absorption wavelength of Chl d is redshifted approx. 40 nm in vivo relative to Chl a, enabling this cyanobacterium to perform oxygenic phototrophy in niche environments enhanced in far-red light. We present measurements of the in vivo energy-storage (E-S) efficiency of photosynthesis in A. marina, obtained using pulsed photoacoustics (PA) over a 90-nm range of excitation wavelengths in the red and far-red. Together with modeling results, these measurements provide the first direct observation of the trap energies of PSI and PSII, and also the photosystem-specific contributions to the total E-S efficiency. We find the maximum observed efficiency in A. marina (40+/-1% at 735 nm) is higher than in the Chl a cyanobacterium Synechococcus leopoliensis (35+/-1% at 690 nm). The efficiency at peak absorption wavelength is also higher in A. marina (36+/-1% at 710 nm vs. 31+/-1% at 670 nm). In both species, the trap efficiencies are approx. 40% (PSI) and approx. 30% (PSII). The PSI trap in A. marina is found to lie at 740+/-5 nm, in agreement with the value inferred from spectroscopic methods. The best fit of the model to the PA data identifies the PSII trap at 723+/-3 nm, supporting the view that the primary electron-donor is Chl d, probably at the accessory (ChlD1) site. A decrease in efficiency beyond the trap wavelength, consistent with uphill energy transfer, is clearly observed and fit by the model. These results demonstrate that the E-S efficiency in A. marina is not thermodynamically limited, suggesting that oxygenic photosynthesis is viable in even redder light environments.

Role of seagrass photosynthesis in root aerobic processes.

PubMed

Smith, R D; Dennison, W C; Alberte, R S

1984-04-01

The role of shoot photosynthesis as a means of supporting aerobic respiration in the roots of the seagrass Zostera marina was examined. O(2) was transported rapidly (10-15 minutes) from the shoots to the root-rhizome tissues upon shoot illumination. The highest rates of transport were in shoots possessing the greatest biomass and leaf area. The rates of O(2) transport do not support a simple gas phase diffusion mechanism. O(2) transport to the root-rhizome system supported aerobic root respiration and in many cases exceeded respiratory requirements leading to O(2) release from the subterranean tissue. Release of O(2) can support aerobic processes in reducing sediments typical of Z. marina habitats. Since the root-rhizome respiration is supported primarily under shoot photosynthetic conditions, then the daily period of photosynthesis determines the diurnal period of root aerobiosis.

Impacts of urban wastewater discharge on seagrass meadows ( Zostera noltii)

NASA Astrophysics Data System (ADS)

Cabaço, Susana; Machás, Raquel; Vieira, Vasco; Santos, Rui

2008-06-01

The abiotic disturbance of urban wastewater discharge and its effects in the population structure, plant morphology, leaf nutrient content, epiphyte load and macroalgae abundance of Zostera noltii meadows were investigated in Ria Formosa coastal lagoon, southern Portugal using both univariate and multivariate analysis. Four sites were assessed, on a seasonal basis, along a gradient from a major Waste Water Treatment Works (WWTW) discharge to a main navigation channel. The wastewater discharge caused an evident environmental disturbance through the nutrient enrichment of the water and sediment, particularly of ammonium. Zostera noltii of the sites closest to the nutrient source showed higher leaf N content, clearly reflecting the nitrogen load. The anthropogenic nutrient enrichment resulted in higher biomass, and higher leaf and internode length, except for the meadow closest to the wastewater discharge (270 m). The high ammonium concentration (158-663 μM) in the water at this site resulted in the decrease of biomass, and both the leaf and internode length, suggesting a toxic effect on Z. noltii. The higher abundance of macroalgae and epiphytes found in the meadow closest to the nutrient source may also affect the species negatively. Shoot density was higher at the nutrient-undisturbed site. Two of the three abiotic processes revealed by Principal Component Analysis were clearly related to the WWTW discharge, a contrast between water column salinity and nutrient concentration and a sediment contrast between both porewater nutrients and temperature and redox potential. A multiple regression analysis showed that these abiotic processes had a significant effect on the biomass-density dynamics of meadows and on the overall size of Z. noltii plants, respectively. Results show that the wastewater discharge is an important source of environmental disturbance and nutrients availability in Ria Formosa lagoon affecting the population structure, morphology and N content of Z

Effects of salinity on photosynthesis and respiration of the seagrass Zostera japonica: A comparison of two established populations in North America

EPA Science Inventory

Zostera japonica is a non-native seagrass along the Pacific Coast of North America that is distributed from Northern California, USA to British Columbia, Canada. Recent observations indicate that the species is expanding both latitudinally and into areas of lower salinity. Ther...

The transcriptome of the novel dinoflagellate Oxyrrhis marina (Alveolata: Dinophyceae): response to salinity examined by 454 sequencing

PubMed Central

2011-01-01

Background The heterotrophic dinoflagellate Oxyrrhis marina is increasingly studied in experimental, ecological and evolutionary contexts. Its basal phylogenetic position within the dinoflagellates make O. marina useful for understanding the origin of numerous unusual features of the dinoflagellate lineage; its broad distribution has lent O. marina to the study of protist biogeography; and nutritive flexibility and eurytopy have made it a common lab rat for the investigation of physiological responses of marine heterotrophic flagellates. Nevertheless, genome-scale resources for O. marina are scarce. Here we present a 454-based transcriptome survey for this organism. In addition, we assess sequence read abundance, as a proxy for gene expression, in response to salinity, an environmental factor potentially important in determining O. marina spatial distributions. Results Sequencing generated ~57 Mbp of data which assembled into 7, 398 contigs. Approximately 24% of contigs were nominally identified by BLAST. A further clustering of contigs (at ≥ 90% identity) revealed 164 transcript variant clusters, the largest of which (Phosphoribosylaminoimidazole-succinocarboxamide synthase) was composed of 28 variants displaying predominately synonymous variation. In a genomic context, a sample of 5 different genes were demonstrated to occur as tandem repeats, separated by short (~200-340 bp) inter-genic regions. For HSP90 several intergenic variants were detected suggesting a potentially complex genomic arrangement. In response to salinity, analysis of 454 read abundance highlighted 9 and 20 genes over or under expressed at 50 PSU, respectively. However, 454 read abundance and subsequent qPCR validation did not correlate well - suggesting that measures of gene expression via ad hoc analysis of sequence read abundance require careful interpretation. Conclusion Here we indicate that tandem gene arrangements and the occurrence of multiple transcribed gene variants are common and

Nutrient dynamics in two seagrass species, Posidonia coriacea and Zostera tasmanica, on Success Bank, Western Australia

NASA Astrophysics Data System (ADS)

Walker, D. I.; Campey, M. L.; Kendrick, G. A.

2004-06-01

Nutrient concentrations and seasonal differences in atomic ratios (N:P) in plant tissue of Posidonia coriacea Kuo and Cambridge and Zostera tasmanica Aschers (formerly Heterozostera tasmanica (Syst Bot 27 (2002) 468) were measured from multiple locations on Success Bank, southwestern Australia, and used to infer nutritional constraints on seagrass vegetative growth, particularly by phosphorus. Posidonia plant tissue at the west site had higher nitrogen than the east site in both summer and winter. Nitrogen concentrations increased in winter, particularly in sheath tissue, but there was little change in root nitrogen concentrations between sites or seasons. Nitrogen concentrations of leaf tissue were all less than median seagrass values reported by Duarte (Mar Ecol Prog Ser 67 (1990) 201). The seasonality in nutrient concentrations in plant tissues suggests greater nutritional constraints in summer, during periods of high growth. Vegetative growth of Posidonia coriacea was more nutrient limited than that of Zostera tasmanica. Translocation of nutrients along rhizomes to the apex may ensure that growing points are not nutrient limited and that growth can be maintained, and was more apparent in Z. tasmanica than P. coriacea. Sexual reproduction placed large demands on P. coriacea through the high investment of nutrients into fruit, resulting in reduced nutritional constraints on successful seedling recruitment by initially providing seedlings with nutrients.

An assessment of site suitability for marina construction in Istanbul, Turkey, using GIS and AHP multicriteria decision analysis.

PubMed

Gumusay, Mustafa Umit; Koseoglu, Gokalp; Bakirman, Tolga

2016-12-01

Marinas play a key role in sea transportation and tourism. The problem of an insufficient marina capacity has revealed in terms of sea traffic due to the demographic structure and increasing tourism potential of Istanbul which is the biggest metropolitan city of Turkey and has around 600-km-long coastline. Therefore, the study area is mainly focused on the Marmara Sea shoreline of Istanbul. Rather than traditional methods, a rapid and cost-effective solution which considers natural and urban environment conditions is essential to satisfy the need for a marina site selection. Thanks to the latest improvements in geographic information systems, it is convenient to perform location selection analysis of marinas taking advantages of geology, land use, demography and accessibility data sets. The goal of this study is to define the areas that are appropriate for building marinas, with the use of topographic and demographic data in a present shoreline applying analytical hierarchy process multicriteria decision-making method. In this study, erosion, landslide, tsunami, land use, geologically hazardous areas, transfer lines, sea traffic data, neighbourhood scale population, age patterns and house income data have been used. Analytical hierarchy process method is used to give a weight to each data set, and a grading system has been developed for the area selection of marinas. The result maps of the analysis that show study area as classified into four categories from good to not suitable are presented. It is possible to create a decision support system for upper scale plans that enable authorities to perform analysis accurately, cost and time effectively using the proposed methodology that integrates multiple data sets with different scales and types.

Oxic microshield and local pH enhancement protects Zostera muelleri from sediment derived hydrogen sulphide.

PubMed

Brodersen, Kasper Elgetti; Nielsen, Daniel Aagren; Ralph, Peter J; Kühl, Michael

2015-02-01

Seagrass is constantly challenged with transporting sufficient O₂ from above- to belowground tissue via aerenchyma in order to maintain aerobic metabolism and provide protection against phytotoxins. Electrochemical microsensors were used in combination with a custom-made experimental chamber to analyse the belowground biogeochemical microenvironment of Zostera muelleri under changing environmental conditions. Measurements revealed high radial O₂ release of up to 500 nmol O2 cm(-2) h(-1) from the base of the leaf sheath, maintaining a c. 300-μm-wide plant-mediated oxic microzone and thus protecting the vital meristematic regions of the rhizome from reduced phytotoxic metabolites such as hydrogen sulphide (H₂S). H₂S intrusion was prevented through passive diffusion of O₂ to belowground tissue from leaf photosynthesis in light, as well as from the surrounding water column into the flow-exposed plant parts during darkness. Under water column hypoxia, high belowground H₂S concentrations at the tissue surface correlated with the inability to sustain the protecting oxic microshield around the meristematic regions of the rhizome. We also found increased pH levels in the immediate rhizosphere of Z. muelleri, which may contribute to further detoxification of H₂S through shifts in the chemical speciation of sulphide. Zostera muelleri can modify the geochemical conditions in its immediate rhizosphere, thereby reducing its exposure to H₂S. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

Settlement with Marina will Result in Cleaner Air on Block Island

EPA Pesticide Factsheets

A marina in Block Island, R.I., has reduced its emissions and taken steps to comply with federal clean air laws following an inspection and follow-up action from the US Environmental Protection Agency.

Using Stable Isotopes to Assess Connectivity: the Importance ...

EPA Pesticide Factsheets

Estuaries located at the interface of terrestrial and oceanic ecosystems receive nutrients from both ecosystems. Stable isotopes of primary producers and consumers are often used as an indicator of nutrient sources. We assembled natural abundance nitrogen stable isotope (δ15N) data for dissolved inorganic nitrate, green macroalgae, seagrass (Zostera marina) and mussels in the nearshore and in estuaries along the west coast of North America to assess the relative importance of terrestrial and oceanic nutrient sources in these systems. We found a latitudinal gradient in nearshore δ15N of nitrate of -0.2 ‰ per degree latitude from Mexico to British Columbia with more depleted isotope ratio to the north. Primary producers (green macroalgae and Zostera marina) located in the nearshore and the marine dominated portion of Pacific Coast estuaries exhibited a similar latitudinal gradient in δ15N of -0.3 ‰ per degree latitude. This latitudinal gradient is similar to δ15N observed for intertidal mussels (Mytilus californianus), which are known to reflect the isotope ratio of the phytoplankton they feed on. The consistent latitudinal gradient for multiple primary producers and a consumer, and the agreement with the gradient in nearshore δ15N of nitrate, suggests that it is a result of oceanic source waters. On the watershed side, there is a gradient in the δ15N of nitrate with southern California systems receiving nitrate with a δ15N-NO3 of about +12 ‰,

Differences in SEM-AVS and ERM-ERL predictions of sediment impacts from metals in two US Virgin Islands marinas.

PubMed

Hinkey, Lynne M; Zaidi, Baqar R

2007-02-01

Two US Virgin Islands marinas were examined for potential metal impacts by comparing sediment chemistry data with two sediment quality guideline (SQG) values: the ratio of simultaneously extractable metals to acid volatile sulfides (SEM-AVS), and effects range-low and -mean (ERL-ERM) values. ERL-ERMs predicted the marina/boatyard complex (IBY: 2118 microg/g dry weight total metals, two exceeded ERMs) would have greater impacts than the marina with no boatyard (CBM: 231 microg/g dry weight total metals, no ERMs exceeded). The AVS-SEM method predicted IBY would have fewer effects due to high AVS-forming metal sulfide complexes, reducing trace metal bioavailability. These contradictory predictions demonstrate the importance of validating the results of either of these methods with other toxicity measures before making any management or regulatory decisions regarding boating and marina impacts. This is especially important in non-temperate areas where sediment quality guidelines have not been validated.

New species of Parapharyngodon (Nematoda: Pharyngodonidae) in Rhinella marina (Anura: Bufonidae) from Grenada, West Indies

USGS Publications Warehouse

Bursey, Charles; Drake, Michael; Cole, Rebecca; Sterner, Mauritz; Pinckney, Rhonda; Zieger, Ulrike

2013-01-01

Parapharyngodon grenadaensis n. sp. (Nematoda: Pharyngodonidae) from the large intestine of the cane toad, Rhinella marina, is described and illustrated. Parapharyngodon grenadaensis n. sp. is the 48th species assigned to the genus and the 16th species from the Neotropical region. It differs from other species in the genus by possessing 4 pairs of caudal papillae, an echinate anterior cloacal lip, and a blunt spicule of 67–104 μm. This is only the second report of R. marina harboring a species of Parapharyngodon.

Friday Harbor Marina Expansion Study--San Juan Island, Washington: Final Detailed Project Report and Environmental Assessment.

DTIC Science & Technology

1981-04-01

pollutants from the marina is the leaching of heavy metals and hydrocarbons from various antifouling paints used on boats. Contamination also occurs from...by pleasure boat, placing a heavy demand on moorage and services in the marina and at the town, providing a major source of income for the area. One...First Cost 4-10 d. Cost Apportionment 4-13 SECTION 5. COORDINATION 5.01 Coordination Framework 5-1 5.02 Coordination With Key Agencies 5-1 a

Assessment of biotic response to heavy metal contamination in Avicennia marina mangrove ecosystems in Sydney Estuary, Australia.

PubMed

Nath, Bibhash; Chaudhuri, Punarbasu; Birch, Gavin

2014-09-01

Mangrove forests act as a natural filter of land-derived wastewaters along industrialized tropical and sub-tropical coastlines and assist in maintaining a healthy living condition for marine ecosystems. Currently, these intertidal communities are under serious threat from heavy metal contamination induced by human activity associated with rapid urbanization and industrialization. Studies on the biotic responses of these plants to heavy metal contamination are of great significance in estuary management and maintaining coastal ecosystem health. The main objective of the present investigation was to assess the biotic response in Avicennia marina ecosystems to heavy metal contamination through the determination of metal concentrations in leaves, fine nutritive roots and underlying sediments collected in fifteen locations across Sydney Estuary (Australia). Metal concentrations (especially Cu, Pb and Zn) in the underlying sediments of A. marina were enriched to a level (based on Interim Sediment Quality Guidelines) at which adverse biological effects to flora could occasionally occur. Metals accumulated in fine nutritive roots greater than underlying sediments, however, only minor translocation of these metals to A. marina leaves was observed (mean translocation factors, TFs, for all elements <0.13, except for Mn). Translocation factors of essential elements (i.e., common plant micro-nutrients, Cu, Ni, Mn and Zn) were greater than non-essential elements (As, Cd, Co, Cr and Pb), suggesting that A. marina mangroves of this estuary selectively excluded non-essential elements, while regulating essential elements and limiting toxicity to plants. This study supports the notion that A. marina mangroves act as a phytostabilizer in this highly modified estuary thereby protecting the aquatic ecosystem from point or non-point sources of heavy metal contamination. Copyright © 2014 Elsevier Inc. All rights reserved.

The potential of mangrove Avicennia marina and A. Alba from Nguling district, Pasuruan, East Java as an antioxidant

NASA Astrophysics Data System (ADS)

Iranawati, F.; Muhammad, F.; Fajri, H.; Kasitowati, R. D.; Arifin, S.

2018-04-01

Free radicals are highly reactive molecules due to unpaired electron in their outer orbital. Excess of free radicals inside human body as consequences of environmental exposure such cigarette smoke may lead to degenerative diseases such as diabetic, cancer etc. This negative effect can be limited by the utilization of natural antioxidant substances, especially produced from plant. Avicennia alba dan A. marina are mangrove species that widely distributed in Indonesia and are expected potential as antioxidant. The objective of this study is to evaluated Avicennia alba dan A. marina potency as antioxidant performed with DPPD (1,1-diphenyl-β-picryl hydrazyl) method. Leaf and bark of Avicennia alba dan A. marina were collected from Nguling District, Pasuruan, East Java. Results shows that based on 50% inhibition Concentration (IC50), Avicennia alba leaf were categorized had a very high antioxidant potential (IC50 14,85 ppm) whereas the bark were categorized had a weak antioxidant potential IC50 167,17 ppm). For A. marina, the leaf were categorized had a moderate antioxidant (IC50 123,23 ppm) whereas the bark were categorized had a weak antioxidant potential (IC50 198,15 ppm).

TOTAL AND BIOAVAILABLE METALS AT MARINA SEDIMENTS IN LAKE TEXOMA

EPA Science Inventory

Total and bioavailable metals in sediments were measured at marina areas in Lake Texoma during the fall of 2001. The metals most often found in the highest concentrations in sediments were Ca (56811 mg/kg) and Al (31095 mg/kg), followed by Fe (19393 mg/kg), K (6089 mg/kg), and Mg...

Imposex and tributyltin contamination as a consequence of the establishment of a marina, and increasing yachting activities at Phuket Island, Thailand.

PubMed

Bech, Michael

2002-01-01

The objective was to investigate how tributyltin (TBT) contamination resulting from the establishment of a new marina and increasing yachting activities at Phuket Island, Thailand affects the area. A minimum of 30 specimen of the mangrove dwelling muricid Chicoreus capucinus were collected at five stations 2 months before and 5, 9, 18 and 33 months after Yacht Haven Marina was constructed. Imposex measured as RPLI and VDSI were significantly correlated to duration of time after construction and distance from the marina. All females developed imposex close to the marina after 18 months, whereas no significant increase occurred at stations more than 2 km from the marina. To evaluate the range of effects of the increasing yachting activities the muricid Thais distinguenda was used as an indicator of imposex at two popular mooring sites for yachts at Phi Phi and Raja Island in Phangna Bay, Thailand. The incidence of imposex was 100% at stations close to the mooring sites. A significant correlation existed between the distance from the sites and the incidence of imposex. The increasing incidence of imposex suggest that TBT contamination is worsening, against global trends, because regulations prohibiting the use of TBT-based paints, do not exist in Thailand.

EFFECTS OF THE INVASIVE, NONINDIGENOUS SEAGRASS ZOSTERA JAPONICA ON NUTRIENT FLUXES BETWEEN THE WATER COLUMN AND BENTHOS IN A NE PACIFIC ESTUARY

EPA Science Inventory

Since its introduction in the early to mid-20th century, the Asian seagrass Zostera japonica has become established in marine and mesohaline portions of many estuaries in the Pacific Northwest. Z. japonica forms dense patches from 0.3-2.4m above mean lower low water, a zone that...

Performance and economics of the PV hybrid power system at Dangling Rope Marina, Utah

NASA Astrophysics Data System (ADS)

Rosenthal, Andrew L.

1999-03-01

The National Park Service has operated a large photovoltaic (PV) hybrid power system at the Dangling Rope Marina since August 1996. Performance and economic analyses for this system based on its first year of operation have been published elsewhere [1,2]. Now, as the system enters its third year of operation, recent changes to the site electrical load and impending additions to the PV array raise new interest in this site as the subject of analysis and evaluation. In 1998, energy conservation measures reduced the site electrical load by 10-12%. At the same time, funding has been allocated to expand the PV array by 40% in 1999. This paper analyzes the effects that these changes will have on the site's fuel use and 20-year life cycle cost.

Seasonal variation in species composition and abundance of demersal fish and invertebrates in a Seagrass Natural Reserve on the eastern coast of the Shandong Peninsula, China

NASA Astrophysics Data System (ADS)

Xu, Qiang; Guo, Dong; Zhang, Peidong; Zhang, Xiumei; Li, Wentao; Wu, Zhongxin

2016-03-01

Seagrass habitats are structurally complex ecosystems, which support high productivity and biodiversity. In temperate systems the density of seagrass may change seasonally, and this may influence the associated fish and invertebrate community. Little is known about the role of seagrass beds as possible nursery areas for fish and invertebrates in China. To study the functioning of a seagrass habitat in northern China, demersal fish and invertebrates were collected monthly using traps, from February 2009 to January 2010. The density, leaf length and biomass of the dominant seagrass Zostera marina and water temperature were also measured. The study was conducted in a Seagrass Natural Reserve (SNR) on the eastern coast of the Shandong Peninsula, China. A total of 22 fish species and five invertebrate species were recorded over the year. The dominant fish species were Synechogobius ommaturus, Sebastes schlegelii, Pholis fangi, Pagrus major and Hexagrammos otakii and these species accounted for 87% of the total number of fish. The dominant invertebrate species were Charybdis japonica and Octopus variabilis and these accounted for 98% of the total abundance of invertebrates. There was high temporal variation in species composition and abundance. The peak number of fish species occurred in August-October 2009, while the number of individual fish and biomass was highest during November 2009. Invertebrate numbers and biomass was highest in March, April, July and September 2009. Temporal changes in species abundance of fishes and invertebrates corresponded with changes in the shoot density and leaf length of the seagrass, Zostera marina.

18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

Code of Federal Regulations, 2010 CFR

2010-04-01

... stations and holding tanks. 1304.403 Section 1304.403 Conservation of Power and Water Resources TENNESSEE... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All pump... operating requirements: (a) Spill-proof connection with shipboard holding tanks; (b) Suction controls or...

ESCHERICHIA COLI AND TOTAL COLIFORMS IN WATER AND SEDIMENTS AT LAKE MARINAS

EPA Science Inventory

Escherichia coli, a fecal coliform, and total coliforms were monitored between September 1999 to October 2001 in five marinas on Lake Texoma, located on the Oklahoma and Texas border. General trend was that densities of E. coli were lower in the summer season due to the lower ...

78 FR 29022 - Safety Zone; Fourth of July Fireworks, Berkeley Marina, Berkeley, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2013-05-17

... Marina Fourth of July Fireworks display in the Captain of the Port, San Francisco area of responsibility... Guard will enforce a 1,000 foot safety zone around the Berkeley Pier in approximate position 37[deg]51... radius 1,000 [[Page 29023

Effects of conventional and biodegradable microplastics on a marine ecosystem engineer (Arenicola marina) and sediment nutrient cycling.

PubMed

Green, Dannielle Senga; Boots, Bas; Sigwart, Julia; Jiang, Shan; Rocha, Carlos

2016-01-01

Effects of microplastic pollution on benthic organisms and ecosystem services provided by sedimentary habitats are largely unknown. An outdoor mesocosm experiment was done to realistically assess the effects of three different types of microplastic pollution (one biodegradable type; polylactic acid and two conventional types; polyethylene and polyvinylchloride) at increasing concentrations (0.02, 0.2 and 2% of wet sediment weight) on the health and biological activity of lugworms, Arenicola marina (Linnaeus, 1758), and on nitrogen cycling and primary productivity of the sediment they inhabit. After 31 days, A. marina produced less casts in sediments containing microplastics. Metabolic rates of A. marina increased, while microalgal biomass decreased at high concentrations, compared to sediments with low concentrations or without microplastics. Responses were strongest to polyvinylchloride, emphasising that different materials may have differential effects. Each material needs to be carefully evaluated in order to assess their risks as microplastic pollution. Overall, both conventional and biodegradable microplastics in sandy sediments can affect the health and behaviour of lugworms and directly or indirectly reduce primary productivity of these habitats. Copyright © 2015 Elsevier Ltd. All rights reserved.

Polychlorinated biphenyls (PCBs) in recreational marina sediments of San Diego Bay, southern California.

PubMed

Neira, Carlos; Vales, Melissa; Mendoza, Guillermo; Hoh, Eunha; Levin, Lisa A

2018-01-01

Polychlorinated biphenyl (PCB) concentrations were determined in surface sediments from three recreational marinas in San Diego Bay, California. Total PCB concentrations ranged from 23 to 153, 31-294, and 151-1387ngg -1 for Shelter Island Yacht Basin (SIYB), Harbor Island West (HW) and Harbor Island East (HE), respectively. PCB concentrations were significantly higher in HE and PCB group composition differed relative to HW and SIYB, which were not significantly different from each other in concentration or group composition. In marina sediments there was a predominance (82-85%) of heavier molecular weight PCBs with homologous groups (6CL-7CL) comprising 59% of the total. In HE 75% of the sites exceeded the effect range median (ERM), and toxicity equivalence (TEQ dioxin-like PCBs) values were higher relative to those of HW and SIYB, suggesting a potential ecotoxicological risk. Copyright © 2017 Elsevier Ltd. All rights reserved.

Implications of Zostera noltii recolonization on Hydrobia ulvae population structure success.

PubMed

Grilo, T F; Cardoso, P G; Pardal, M A

2012-02-01

Over 1990-1998, the Mondego estuary, Portugal, experienced profound modifications due to eutrophication, culminating in the disappearance and replacement of Zostera noltii by opportunistic macroalgae in the inner most disturbed areas. A decade after restoration measures implementation, Z. noltii started to gradually recolonize the inner parts, following 20 years of absence. This work explores the factors underlying successful Z. noltii recolonization and its subsequent implications on a mud snail Hydrobia ulvae population. During the macroalgal bloom, highest values in H. ulvae abundance, biomass and production were recorded, strongly declining afterwards. Three recovery attempts characterized the post-restoration phase, with considerably increases in H. ulvae abundance, biomass and production since Z. noltii reappearance. The seagrass provided long-term protection and abundant food resources for reproductive adults, contrarily to the ephemeral macroalgae. Through time, large size individuals increased, becoming the population more stable, structured and similar to the one inhabiting the "original"Z. noltii meadows. Copyright © 2011 Elsevier Ltd. All rights reserved.

Reconstructing Contaminant Deposition in a San Francisco Bay Marina, California

PubMed Central

Love, Adam H.; Esser, Bradley K.; Hunt, James R.

2010-01-01

Two sediment cores were collected from a marina in the San Francisco Bay to characterize historical sediment contamination resulting from the direct discharge of industrial wastewater from Naval Air Station Alameda. Depth profiles of trace metals, petroleum hydrocarbons, and radionuclides were determined with a 12-cm spacing down to a depth of 120 cm. The chronology of sediment accumulation is established by depth profiles of sedimentary time markers in conjunction with information on site history. The traditional approach of determining sediment accumulation rates by measuring atmospheric 210Pb deposition was obscured by a larger source of 210Pb in the sediments from the decay of anthropogenic 226Ra, likely from luminescent paints used at this facility and released to the marina. The sedimentation rates inferred from the data indicate that the greatest amount of contamination by trace metals and petroleum hydrocarbons took place between 1940 and 1960. In addition, anthropogenic 226Ra activities are positively correlated with some of the contaminants in the sediments, allowing the wastewater discharged from the facility to be distinguished from baywide contamination. In locations such as this, where there is a complex history of contaminant deposition, a source-specific tracer may be the only feasible method of attributing historical contamination to a point source. PMID:20333267

Hybridization and massive mtDNA unidirectional introgression between the closely related Neotropical toads Rhinella marina and R. schneideri inferred from mtDNA and nuclear markers

PubMed Central

2011-01-01

Background The classical perspective that interspecific hybridization in animals is rare has been changing due to a growing list of empirical examples showing the occurrence of gene flow between closely related species. Using sequence data from cyt b mitochondrial gene and three intron nuclear genes (RPL9, c-myc, and RPL3) we investigated patterns of nucleotide polymorphism and divergence between two closely related toad species R. marina and R. schneideri. By comparing levels of differentiation at nuclear and mtDNA levels we were able to describe patterns of introgression and infer the history of hybridization between these species. Results All nuclear loci are essentially concordant in revealing two well differentiated groups of haplotypes, corresponding to the morphologically-defined species R. marina and R. schneideri. Mitochondrial DNA analysis also revealed two well-differentiated groups of haplotypes but, in stark contrast with the nuclear genealogies, all R. schneideri sequences are clustered with sequences of R. marina from the right Amazon bank (RAB), while R. marina sequences from the left Amazon bank (LAB) are monophyletic. An Isolation-with-Migration (IM) analysis using nuclear data showed that R. marina and R. schneideri diverged at ≈ 1.69 Myr (early Pleistocene), while R. marina populations from LAB and RAB diverged at ≈ 0.33 Myr (middle Pleistocene). This time of divergence is not consistent with the split between LAB and RAB populations obtained with mtDNA data (≈ 1.59 Myr), which is notably similar to the estimate obtained with nuclear genes between R. marina and R. schneideri. Coalescent simulations of mtDNA phylogeny under the speciation history inferred from nuclear genes rejected the hypothesis of incomplete lineage sorting to explain the conflicting signal between mtDNA and nuclear-based phylogenies. Conclusions The cytonuclear discordance seems to reflect the occurrence of interspecific hybridization between these two closely related

76 FR 38020 - Safety Zone; Bay Point Fireworks, Bay Point Marina; Marblehead, OH

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-29

...-AA00 Safety Zone; Bay Point Fireworks, Bay Point Marina; Marblehead, OH AGENCY: Coast Guard, DHS... from portions of Lake Erie for the Bay Point Fireworks. This temporary safety zone is necessary to protect spectators and vessels from the hazards associated with fireworks displays. DATES: This regulation...

Direct uptake of canopy rainwater causes turgor-driven growth spurts in the mangrove Avicennia marina.

PubMed

Steppe, Kathy; Vandegehuchte, Maurits W; Van de Wal, Bart A E; Hoste, Pieter; Guyot, Adrien; Lovelock, Catherine E; Lockington, David A

2018-03-17

Mangrove forests depend on a dense structure of sufficiently large trees to fulfil their essential functions as providers of food and wood for animals and people, CO2 sinks and protection from storms. Growth of these forests is known to be dependent on the salinity of soil water, but the influence of foliar uptake of rainwater as a freshwater source, additional to soil water, has hardly been investigated. Under field conditions in Australia, stem diameter variation, sap flow and stem water potential of the grey mangrove (Avicennia marina (Forssk.) Vierh.) were simultaneously measured during alternating dry and rainy periods. We found that sap flow in A. marina was reversed, from canopy to roots, during and shortly after rainfall events. Simultaneously, stem diameters rapidly increased with growth rates up to 70 μm h-1, which is about 25-75 times the normal growth rate reported in temperate trees. A mechanistic tree model was applied to provide evidence that A. marina trees take up water through their leaves, and that this water contributes to turgor-driven stem growth. Our results indicate that direct uptake of freshwater by the canopy during rainfall supports mangrove tree growth and serve as a call to consider this water uptake pathway if we aspire to correctly assess influences of changing rainfall patterns on mangrove tree growth.

Assessing the impacts of salinity and nutrient stress to Ruppia ...

EPA Pesticide Factsheets

Healthy seagrass beds were once found throughout the shallow areas of Narragansett Bay, R.I. but have disappeared due to infilling, pollution and disease. In Greenwich Bay, a highly developed embayment within Narragansett Bay, Ruppia maritima has colonized an area on the northern shore historically dominated by Zostera marina. Ruppia is extremely salinity tolerant, and may also be more nutrient tolerant than Zostera. To test this hypothesis 6-week microcosm experiments were conducted in the summers of 2014 and 2015. Microcosms were renewed daily to simulate tidal flushing and the water column was dosed with a 15N tracer for the first week of the experiments. In the 2014 microcosm experiment two salinity (20, 30 ppt) and four nutrient (0, 5, 10, 30 µM inorganic N) levels were used to test the species’ relative tolerance. This experiment yielded structurally significant results for Ruppia but no significant differences were detected for Zostera. In 2015 this experiment was performed for a second time with lower salinity (5, 30 ppt) and higher nutrients (0, 30, 100, 300, 1000 µM inorganic N) in order to determine Zostera’s tolerance to nutrient and salinity stress and confirm the previously observed Ruppia results. Both species had significant structural responses to the nutrient and salinity variables. Isotopic analysis run on above-ground tissue indicated that with increasing nutrient levels δ15N in the seagrass shoots increased, suggesting that nutrients

ASSESSING THE IMPACTS OF SALINITY AND NUTRIENT ...

EPA Pesticide Factsheets

Healthy seagrass beds were once found throughout the shallow areas of Narragansett Bay, R.I. but have disappeared due to infilling, pollution and disease. In Greenwich Bay, a highly developed embayment within Narragansett Bay, Ruppia maritima has colonized an area on the northern shore once dominated by Zostera marina. This area is sandy, which may allow groundwater seepage. Ruppia is extremely salinity tolerant, and may also be more nutrient tolerant than Zostera. A six week microcosm experiment at two salinity (20 and 30 ppt) and 4 nutrient (0, 5, 10, and 30 µM inorganic N) levels to test their relative tolerance was conducted in 2014. Treatments were renewed daily to simulate tidal flushing and the exposure water was dosed with 15N for the first week of the experiment. At the end of the experiment, the plants were weighed and measured, and dried for later isotopic analysis. In the first experiment, Ruppia had significant structural responses to both nutrients and salinity; there was a slight decline in root weight and a decrease in the total number of shoots with increasing nutrients. Average Ruppia blade length decreased with increasing nutrients and this decrease was more evident at 30 ppt. In contrast, Zostera had no significant structural differences. For both species, there were no differences in shoot or root/rhizome weights in any treatment, nor were there differences in isotopic results due to salinity. However, δ15N in the tissue increase

Phenology and Growth dynamics of Avicennia marina in the Central Red Sea

PubMed Central

Almahasheer, Hanan; Duarte, Carlos M.; Irigoien, Xabier

2016-01-01

The formation of nodes, stem elongation and the phenology of stunted Avicennia marina was examined in the Central Red Sea, where Avicennia marina is at the limit of its distribution range and submitted to extremely arid conditions with salinity above 38 psu and water temperature as high as 35° C. The annual node production was rather uniform among locations averaging 9.59 node y−1, which resulted in a plastocron interval, the interval in between production of two consecutive nodes along a stem, of 38 days. However, the internodal length varied significantly between locations, resulting in growth differences possibly reflecting the environmental conditions of locations. The reproductive cycle lasted for approximately 12 months, and was characterized by peak flowering and propagule development in November and January. These phenological observations provide a starting point for research and restoration programs on the ecology of mangroves in the Central Red Sea, while the plastochrone index reported here would allow calculations of the growth and production of the species from simple morphological measurements. PMID:27892956

Outbreak of Paratyphoid Fever Among Naval Personnel in Peru (Brote de Fiebre Paratifoidea Entre Personal de la Marina Del Peru.)

DTIC Science & Technology

1992-01-01

son menosde 2Okniquecaiusania nvar comun Cs la tifoidea cldsica producida por S parte de las infecciones hunanas La fiebre Isv’lht la parat-foidea. par...TITLE (Include Secunty Clasifi4tin) Brote de Fiebre Parutifoidea Entre Personal de la Marina del Peru 1.PERSON4AL AUTHORCS) Pazzagllia G; Wgnall FS...CLASSIFIATIO F THIS PAGE All othe~redmtons areobolete. ZINCLASSIITIED Best Avai~lable Copy BROTE Dl FIEBRE PARATIFOIDEA ENTRE PERSONAL DE1 LA MARINA DEL PERU G

Economic Impacts from Spending by Marina Slip Reenter at Raystown Lake

DTIC Science & Technology

2008-02-01

Impacts from Spending by Marina Slip Renters at Raystown Lake Wen-Huei Chang, Richard Kasul, LiChu Lee, and Kathleen Perales Environmental ...water quality, social or environmental impacts , or the like. This study did not include changes in use based on increases in gasoline prices or...1997. Classifcation of Corps of Engineers Projects for Economic Impact Assesment . Unpublished MS Thesis. East Lansing, MI: Department of Park

Morphological characterization of Eustrongylides sp. larvae (Nematoda, Dioctophymatoidea) parasite of Rhinella marina (Amphibia: Bufonidae) from Eastern Amazonia.

PubMed

Melo, Francisco Tiago de Vasconcelos; Melo, Caroline do Socorro Barros; Nascimento, Luciana de Cássia Silva do; Giese, Elane Guerreiro; Furtado, Adriano Penha; Santos, Jeannie Nascimento Dos

2016-06-07

Absctract Eustrongylides spp. nematodes have birds as final hosts and uses other vertebrates as intermediate/paratenic host (fish, amphibians and reptiles) and have zoonotic potential. In amphibians, the larvae may be located in the subcutaneous tissues, liver and mesentery, between the muscle fibres, especially in the lower limbs. Rhinella marina, which is widely observed in Brazil, has exhibited complex diversity in its helminth fauna, reflecting the unique habitat of the Amazon biome. For the first time, this study describes the morphological aspects of third-stage larvae of Eustrongylides sp. in Rhinella marina from Santa Cruz do Ararí, Marajó Archipelago, Eastern Amazonia, using light and scanning electron microscopy.

Molecular phylogeny and taxonomic revision of the genus Wittrockiella (Pithophoraceae, Cladophorales), including the descriptions of W. australis sp. nov. and W. zosterae sp. nov.

PubMed

Boedeker, Christian; O'Kelly, Charles J; West, John A; Hanyuda, Takeaki; Neale, Adele; Wakana, Isamu; Wilcox, Mike D; Karsten, Ulf; Zuccarello, Giuseppe C

2017-06-01

Wittrockiella is a small genus of filamentous green algae that occurs in habitats with reduced or fluctuating salinities. Many aspects of the basic biology of these algae are still unknown and the phylogenetic relationships within the genus have not been fully explored. We provide a phylogeny based on three ribosomal markers (ITS, LSU, and SSU rDNA) of the genus, including broad intraspecific sampling for W. lyallii and W. salina, recommendations for the use of existing names are made, and highlight aspects of their physiology and life cycle. Molecular data indicate that there are five species of Wittrockiella. Two new species, W. australis and W. zosterae, are described, both are endophytes. Although W. lyallii and W. salina can be identified morphologically, there are no diagnostic morphological characters to distinguish between W. amphibia, W. australis, and W. zosterae. A range of low molecular weight carbohydrates were analyzed but proved to not be taxonomically informative. The distribution range of W. salina is extended to the Northern Hemisphere as this species has been found in brackish lakes in Japan. Furthermore, it is shown that there are no grounds to recognize W. salina var. kraftii, which was described as an endemic variety from a freshwater habitat on Lord Howe Island, Australia. Culture experiments indicate that W. australis has a preference for growth in lower salinities over full seawater. For W. amphibia and W. zosterae, sexual reproduction is documented, and the split of these species is possibly attributable to polyploidization. © 2017 Phycological Society of America.

OCCURRENCE OF METYL TERT-BUTYL ETHER (MTBE) AT FIVE MARINAS IN LAKE TEXOMA

EPA Science Inventory

Occurrence of methyl tert-butyl ether (MTBE) in five marinas was monitored between June 1999 and November 2000 in Lake Texoma located on the border of Oklahoma and Texas. MTBE is a commonly used gasoline additive and a suspected carcinogen. Lake water was collected at loc...

Light-promoted rhodopsin expression and starvation survival in the marine dinoflagellate Oxyrrhis marina.

PubMed

Guo, Zhiling; Zhang, Huan; Lin, Senjie

2014-01-01

The discovery of microbial rhodopsins in marine proteobacteria changed the dogma that photosynthesis is the only pathway to use the solar energy for biological utilization in the marine environment. Although homologs of these rhodopsins have been identified in dinoflagellates, the diversity of the encoding genes and their physiological roles remain unexplored. As an initial step toward addressing the gap, we conducted high-throughput transcriptome sequencing on Oxyrrhis marina to retrieve rhodopsin transcripts, rapid amplification of cDNA ends to isolate full-length cDNAs of dominant representatives, and quantitative reverse-transcription PCR to investigate their expression under varying conditions. Our phylogenetic analyses showed that O. marina contained both the proton-pumping type (PR) and sensory type (SR) rhodopsins, and the transcriptome data showed that the PR type dominated over the SR type. We compared rhodopsin gene expression for cultures kept under light: dark cycle and continuous darkness in a time course of 24 days without feeding. Although both types of rhodopsin were expressed under the two conditions, the expression levels of PR were much higher than SR, consistent with the transcriptomic data. Furthermore, relative to cultures kept in the dark, rhodopsin expression levels and cell survival rate were both higher in cultures grown in the light. This is the first report of light-dependent promotion of starvation survival and concomitant promotion of PR expression in a eukaryote. While direct evidence needs to come from functional test on rhodopsins in vitro or gene knockout/knockdown experiments, our results suggest that the proton-pumping rhodopsin might be responsible for the light-enhanced survival of O. marina, as previously demonstrated in bacteria.

77 FR 37604 - Safety Zone; Fourth of July Fireworks, Berkeley Marina, Berkeley, CA

Federal Register 2010, 2011, 2012, 2013, 2014

2012-06-22

...: The Coast Guard will enforce a 1,000 foot safety zone around the Berkeley Pier in position 37[deg]51... Zone; Fourth of July Fireworks, Berkeley Marina, Berkeley, CA AGENCY: Coast Guard, DHS. ACTION: Notice of enforcement of regulation. SUMMARY: The Coast Guard will enforce the safety zone for the Berkeley...

Bacteraemia caused by Sciscionella marina in a lymphoma patient: phenotypically mimicking Nocardia.

PubMed

Sinha, M; Shivaprakash, M R; Chakrabarti, A; Shafiulla, M; Babu, K G; Jayshree, R S

2013-06-01

A 55-year-old female patient with malignant lymphoma after induction chemotherapy developed fever. Blood culture yielded an organism biochemically identified as representing Nocardia spp., but molecular identification (16S rRNA gene sequencing) later identified it as representing Sciscionella marina. This is the first report, to the best of our knowledge, of Sciscionella being isolated from a human sample.

[Vitamin B12-independent strains of Methylophaga marina isolated from Red Sea algae].

PubMed

Li, Ts D; Doronina, N V; Ivanova, E G; Trotsenko, Iu A

2007-01-01

Two strains (KM3 and KM5) of halophilic methylobacteria isolated from Red Sea algae do not require vitamin B12 for growth and can use methanol, methylamine, dimethylamine, trimethylamine, dimethyl sulfide, and fructose as sources of carbon and energy. The cells of these strains are gram-negative motile monotrichous (strain KM3) or peritrichous (strain KM5) rods. The strains are strictly aerobic and require Na+ ions but not growth factors for growth. They are oxidase- and catalase-positive and reduce nitrates to nitrites. Both strains can grow in a temperature range of 4 to 37 degrees C (with optimal growth at 29-34 degrees C), at pH between 5.5 and 8.5 (with optimal growth at pH 7.5-8.0), and in a range of salt concentrations between 0.5 and 15% NaCl (with optimal growth at 5-9% NaCl). The phospholipids of these strains are dominated by phosphatidylethanolamine and phosphatidylglycerol and also include phosphatidylcholine, phosphatidylserine, and cardiolipin. The dominant fatty acids are C(16:1omega7c) and C(16:0). The major ubiquinone is Q8. The cells accumulate ectoin, glutamate, and sucrose as intracellular osmoprotectants. The strains implement the 2-keto-3-deoxy-6-phosphogluconate-dependent variant of the ribulose monophosphate pathway. The G+C content of the DNA is 44.4-44.7 mol %. Analysis of the 16S rRNA genes showed that both strains belong to Gammaproteobacteria and have a high degree of homology (99.4%) to Methylophaga marina ATCC 35842T . Based on the data of polyphasic taxonomy, strains KM3 and KM5 are identified as new strains M. marina KM3 (VKM B-2386) and M. marina KM5 (VKM B-2387). The ability of these strains to produce auxins (indole-3-acetic acid) suggests their metabolic association with marine algae.

Eelgrass Meadows in the California Channel Islands and Adjacent Coast Reveal a Mosaic of Two Species, Evidence for Introgression and Variable Clonality

PubMed Central

Coyer, J. A.; Miller, K. A.; Engle, J. M.; Veldsink, J.; Cabello-Pasini, A.; Stam, W. T.; Olsen, J. L.

2008-01-01

Background and Aims Seagrasses are important facilitator species in shallow, soft-bottom marine environments worldwide and, in many places, are threatened by coastal development and eutrophication. One narrow-leaved species (Zostera marina) and one wide-leaved species, variously designated as Z. marina, Z. pacifica or Z. asiatica, are found off the California Channel Islands and adjacent California–Mexico coast. The aim of the present study was to confirm species identification genetically and to link patterns of genetic diversity, connectivity and hybridization among and within the populations with historical sea levels (Ice Age) or the contemporary environment. Methods Samples (n = 11–100) were collected from 28 sites off five California Channel Islands and six sites off the adjacent coast of southern California and Baja California, Mexico. DNA polymorphisms of the rDNA-ITS (internal transcribed spacer) cistron (nuclear), the matK intron (chloroplast) and nine microsatellite loci (nuclear) were examined in a population genetic and phylogeographic context. Key Results All wide-leaved individuals were Z. pacifica, whereas narrow-leaved forms were Z. marina. Microsatellite genotypes were consistent with hybridization between the two species in three populations. The present distribution of Z. pacifica follows a glacial age land mass rather than present oceanographic regimes, but no link was observed between the present distribution of Z. marina and past or present environments. Island populations of Z. marina often were clonal and characterized by low genotypic diversity compared with populations along the Baja California coast. The high level of clonal connectivity around Santa Catalina Island indicated the importance of dispersal and subsequent re-establishment of vegetative fragments. Conclusions The pristine environmental conditions of offshore islands do not guarantee maximum genetic diversity. Future restoration and transplantation efforts of seagrasses

The energy production of juvenile Arenicola marina (Polychaeta) under anoxic and hypoxic conditions

NASA Astrophysics Data System (ADS)

Schiedek, Doris; Schöttler, Udo

1990-06-01

The mode of anaerobic energy production of juvenile Arenicola marina (0-generation) was investigated under experimental conditions and in the biotope. Under experimental anaerobic conditions, juvenile A. marina produce energy by the pathways known from the adults and other euryoxic invertebrates with succinate and the volatile fatty acids, acetate and propionate, as main end products. However, the juvenile lugworms are less resistent to anoxia than the adults. The reasons for this might be their small glycogen stores and their limited ability to reduce the metabolic rate. Nevertheless, on the tidal flats the juveniles settle particularly in the area next to the high tide line, which offers such extreme conditions that adult lugworms cannot live there. This different behaviour can be explained by the dissimilar ability to use oxygen at very low partial pressures. Juveniles maintain an aerobic energy metabolism even at a PWO 2 of 15 Torr at which adults are forced to produce energy exclusively by the less effective anaerobic mode. In the field, no indications of an anaerobic energy metabolism were detected in juveniles even after an exposure of 8 hours.

DIGESTIVE BIOAVAILABILITY TO A DEPOSIT FEDDER (ARENICOLA MARINA) OF POLYCYCLIC AROMATIC HYDROCARBONS ASSOCIATED WITH ANTHRPOGENIC PARTICLES

EPA Science Inventory

Marine sediments around urban areas serve as catch basins for anthropogenic particles containing polycyclic aromatic hydrocarbons (PAHs). Using incubations with gut fluids extracted from a deposit-feeding polychaete (Arenicola marina), we determined the digestive bioavailability ...

Sea Level Affecting Marshes Model (SLAMM) ‐ New functionality for predicting changes in distribution of submerged aquatic vegetation in response to sea level rise

USGS Publications Warehouse

Lee II, Henry; Reusser, Deborah A.; Frazier, Melanie R; McCoy, Lee M; Clinton, Patrick J.; Clough, Jonathan S.

2014-01-01

The “Sea‐Level Affecting Marshes Model” (SLAMM) is a moderate resolution model used to predict the effects of sea level rise on marsh habitats (Craft et al. 2009). SLAMM has been used extensively on both the west coast (e.g., Glick et al., 2007) and east coast (e.g., Geselbracht et al., 2011) of the United States to evaluate potential changes in the distribution and extent of tidal marsh habitats. However, a limitation of the current version of SLAMM, (Version 6.2) is that it lacks the ability to model distribution changes in seagrass habitat resulting from sea level rise. Because of the ecological importance of SAV habitats, U.S. EPA, USGS, and USDA partnered with Warren Pinnacle Consulting to enhance the SLAMM modeling software to include new functionality in order to predict changes in Zostera marina distribution within Pacific Northwest estuaries in response to sea level rise. Specifically, the objective was to develop a SAV model that used generally available GIS data and parameters that were predictive and that could be customized for other estuaries that have GIS layers of existing SAV distribution. This report describes the procedure used to develop the SAV model for the Yaquina Bay Estuary, Oregon, appends a statistical script based on the open source R software to generate a similar SAV model for other estuaries that have data layers of existing SAV, and describes how to incorporate the model coefficients from the site‐specific SAV model into SLAMM to predict the effects of sea level rise on Zostera marina distributions. To demonstrate the applicability of the R tools, we utilize them to develop model coefficients for Willapa Bay, Washington using site‐specific SAV data.

1992 census of transportation, communications, and utilities : subject series : miscellaneous subjects

DOT National Transportation Integrated Search

1996-08-01

Provides statistics on sources of revenue from passenger, motor freight, water, and air transportation as well as pipelines, marinas, public warehousing, travel agencies, cable, radio, telephone, electric utilities, and construction.

Dietary supplementation of Avicennia marina extract on immune protection and disease resistance in Amphiprion sebae against Vibrio alginolyticus.

PubMed

Dhayanithi, Nagarajan Balachandran; Kumar, Thipramalai Thankappan Ajith; Arockiaraj, Jesu; Balasundaram, Chellam; Harikrishnan, Ramasamy

2015-07-01

The effect of Avicennia marina aqueous leaf extract on innate immune mechanisms such as total white blood cell counts (WBC), serum lysozyme activity, respiratory burst assay, alternative complement (ACH50) assay, phagocytic activity assay, disease resistance, gut bacteria, and survival rate of clownfish (Amphiprion sebae) against Vibrio alginolyticus is reported. Healthy fish challenged with V. alginolyticus (1 × 10(7) cells ml(-1)) were fed with diets supplemented (0, 1, 2, and 4%) with A. marina extract. The survival rate was 85% and 80% in infected fish fed with 4% and 8% supplementation diet; with 1% diet it was 70% while in the infected untreated group it was only 10%. The total gut bacteria flora was high in 8% and 4% supplementation diet groups with 2.8 × 10(5) and 4.7 × 10(4) cfu/g while it was 8.9 × 10(3) cfu/g in 1% diet group. The immunological parameters significantly increased on weeks 6 and 8 when infected fish were fed with 1% or 4% supplementation diet. This study reports that in clownfish challenged with V. alginolyticus, dietary administration of the 1% or 4% of A. marina extract improved the immune status and survival rate. Copyright © 2015 Elsevier Ltd. All rights reserved.

Estimating maximum depth distribution of seagrass using underwater videography

DOE Office of Scientific and Technical Information (OSTI.GOV)

Norris, J.G.; Wyllie-Echeverria, S.

1997-06-01

The maximum depth distribution of eelgrass (Zostera marina) beds in Willapa Bay, Washington appears to be limited by light penetration which is likely related to water turbidity. Using underwater videographic techniques we estimated that the maximum depth penetration in the less turbid outer bay was -5.85 ft (MILW) and in the more turbid inner bay was only -1.59 ft (MLLW). Eelgrass beds had well defined deepwater edges and no eelgrass was observed in the deep channels of the bay. The results from this study suggest that aerial photographs taken during low tide periods are capable of recording the majority ofmore » eelgrass beds in Willapa Bay.« less

Ecology and systematics of a new species of Uromunna (Crustacea: Isopoda) from Spanish eelgrass beds

NASA Astrophysics Data System (ADS)

Esquete, Patricia; Wilson, George D. F.; Troncoso, Jesús S.

2014-06-01

Uromunna naherba sp. nov. is described from eelgrass beds ( Zostera marina and Z. noltii) of the NW Iberian Peninsula. This is the second species of the genus reported from the NE Atlantic, after U. petiti. The new species was more abundant on rhizomes than on the leaves of the plants. Seasonal samples show that ovigerous females are present throughout the year, but become more abundant in late spring and summer, when adult males decrease in frequency. Ovigerous females appear in only one size class. Owing to the yearly productivity cycle of the eelgrasses, these data suggest that the species is semelparous and completes its lifecycle within 1 year. The taxonomic characters of the genus are discussed.

Long-term analysis of Zostera noltei: A retrospective approach for understanding seagrasses' dynamics.

PubMed

Calleja, Felipe; Galván, Cristina; Silió-Calzada, Ana; Juanes, José A; Ondiviela, Bárbara

2017-09-01

Long-term studies are necessary to establish trends and to understand seagrasses' spatial and temporal dynamic. Nevertheless, this type of research is scarce, as the required databases are often unavailable. The objectives of this study are to create a method for mapping the seagrass Zostera noltei using remote sensing techniques, and to apply it to the characterization of the meadows' extension trend and the potential drivers of change. A time series was created using a novel method based on remote sensing techniques that proved to be adequate for mapping the seagrass in the emerged intertidal. The meadows seem to have a decreasing trend between 1984 and the early 2000s, followed by an increasing tendency that represents a recovery in the extension area of the species. This 30-year analysis demonstrated the Z. noltei's recovery in the study site, similar to that in other estuaries nearby and contrary to the worldwide decreasing behavior of seagrasses. Copyright © 2017 Elsevier Ltd. All rights reserved.

A new mechanistic understanding of light-limitation in the seagrass Zostera muelleri.

PubMed

Davey, Peter A; Pernice, Mathieu; Ashworth, Justin; Kuzhiumparambil, Unnikrishnan; Szabó, Milán; Dolferus, Rudy; Ralph, Peter J

2018-03-01

In this study we investigated the effect of light-limitation (∼20 μmol photons m -2  s -1 ) on the southern hemisphere seagrass, Zostera muelleri. RNA sequencing, chlorophyll fluorometry and HPLC techniques were used to investigate how the leaf-specific transcriptome drives changes in photosynthesis and photo-pigments in Z. muelleri over 6 days. 1593 (7.51%) genes were differentially expressed on day 2 and 1481 (6.98%) genes were differentially expressed on day 6 of the experiment. Differential gene expression correlated with significant decreases in rETR Max , I k , an increase in Yi (initial photosynthetic quantum yield of photosystem II), and significant changes in pigment composition. Regulation of carbohydrate metabolism was observed along with evidence that abscisic acid may serve a role in the low-light response of this seagrass. This study provides a novel understanding of how Z. muelleri responds to light-limitation in the marine water column and provides potential molecular markers for future conservation monitoring efforts. Copyright © 2018 Elsevier Ltd. All rights reserved.

Comparative study on the toxic effects of red tide flagellates Heterocapsa circularisquama and Chattonella marina on the short-necked clam (Ruditapes philippinarum).

PubMed

Kim, Daekyung; Choi, Kwang-Sik; Hong, Hyun-Ki; Jiang, Zedong; Zou, Yanan; Choi, Kyu-Sung; Yamasaki, Yasuhiro; Matsuyama, Yukihiko; Yamaguchi, Kenichi; Oda, Tatsuya

2011-01-01

Heterocapsa circularisquama showed much higher toxic effects on short-necked clams than Chattonella marina. Clams exposed to H. circularisquama exhibited morphological changes concomitant with an accumulation of mucus-like substances in the gills, a profound reduction in filtration activity, and lysosomal destabilization in hemocytes. Chattonella marina was less effective than H. circularisquama, and Heterocapsa triquetra was almost harmless in all these criteria. These results suggest that H. circularisquama exerted its lethal effect on short-necked clams through gill tissue damage and subsequent induction of physiological stress.

Two Cases of Peritonitis Caused by Kocuria marina in Patients Undergoing Continuous Ambulatory Peritoneal Dialysis▿

PubMed Central

Lee, Ja Young; Kim, Si Hyun; Jeong, Haeng Soon; Oh, Seung Hwan; Kim, Hye Ran; Kim, Yeong Hoon; Lee, Jeong Nyeo; Kook, Joong-Ki; Kho, Weon-Gyu; Bae, Il Kwon; Shin, Jeong Hwan

2009-01-01

Kocuria spp. are members of the Micrococcaceae family that are frequently found in the environment and on human skin. Few human infections have been reported. We describe what appear to be the first two cases of Kocuria marina peritonitis in patients undergoing continuous ambulatory peritoneal dialysis. PMID:19692561

Growth responses of the mangrove Avicennia marina to salinity: development and function of shoot hydraulic systems require saline conditions

PubMed Central

Nguyen, Hoa T.; Stanton, Daniel E.; Schmitz, Nele; Farquhar, Graham D.; Ball, Marilyn C.

2015-01-01

Background and Aims Halophytic eudicots are characterized by enhanced growth under saline conditions. This study combines physiological and anatomical analyses to identify processes underlying growth responses of the mangrove Avicennia marina to salinities ranging from fresh- to seawater conditions. Methods Following pre-exhaustion of cotyledonary reserves under optimal conditions (i.e. 50 % seawater), seedlings of A. marina were grown hydroponically in dilutions of seawater amended with nutrients. Whole-plant growth characteristics were analysed in relation to dry mass accumulation and its allocation to different plant parts. Gas exchange characteristics and stable carbon isotopic composition of leaves were measured to evaluate water use in relation to carbon gain. Stem and leaf hydraulic anatomy were measured in relation to plant water use and growth. Key Results Avicennia marina seedlings failed to grow in 0–5 % seawater, whereas maximal growth occurred in 50–75 % seawater. Relative growth rates were affected by changes in leaf area ratio (LAR) and net assimilation rate (NAR) along the salinity gradient, with NAR generally being more important. Gas exchange characteristics followed the same trends as plant growth, with assimilation rates and stomatal conductance being greatest in leaves grown in 50–75 % seawater. However, water use efficiency was maintained nearly constant across all salinities, consistent with carbon isotopic signatures. Anatomical studies revealed variation in rates of development and composition of hydraulic tissues that were consistent with salinity-dependent patterns in water use and growth, including a structural explanation for low stomatal conductance and growth under low salinity. Conclusions The results identified stem and leaf transport systems as central to understanding the integrated growth responses to variation in salinity from fresh- to seawater conditions. Avicennia marina was revealed as an obligate halophyte

Modelling the growth kinetics of Kocuria marina DAGII as a function of single and binary substrate during batch production of β-Cryptoxanthin.

PubMed

Mitra, Ruchira; Chaudhuri, Surabhi; Dutta, Debjani

2017-01-01

In the present investigation, growth kinetics of Kocuria marina DAGII during batch production of β-Cryptoxanthin (β-CRX) was studied by considering the effect of glucose and maltose as a single and binary substrate. The importance of mixed substrate over single substrate has been emphasised in the present study. Different mathematical models namely, the Logistic model for cell growth, the Logistic mass balance equation for substrate consumption and the Luedeking-Piret model for β-CRX production were successfully implemented. Model-based analyses for the single substrate experiments suggested that the concentrations of glucose and maltose higher than 7.5 and 10.0 g/L, respectively, inhibited the growth and β-CRX production by K. marina DAGII. The Han and Levenspiel model and the Luong product inhibition model accurately described the cell growth in glucose and maltose substrate systems with a R 2 value of 0.9989 and 0.9998, respectively. The effect of glucose and maltose as binary substrate was further investigated. The binary substrate kinetics was well described using the sum-kinetics with interaction parameters model. The results of production kinetics revealed that the presence of binary substrate in the cultivation medium increased the biomass and β-CRX yield significantly. This study is a first time detailed investigation on kinetic behaviours of K. marina DAGII during β-CRX production. The parameters obtained in the study might be helpful for developing strategies for commercial production of β-CRX by K. marina DAGII.

The effect of wind direction and building surroundings on a marina bay in the Black Sea

NASA Astrophysics Data System (ADS)

Katona, Cosmin; Safta, Carmen Anca

2017-01-01

The wind effect has usually a major importance in the marina bay. These environmental sites are an interplay between tourist and commercial activities, requiring a high-detailed and definition studies of the dynamic fluid in the harbor. Computational Fluid Dynamics (CFD) has been used elaborately in urban surroundings research. However, most CFD studies were performed for harbors for only a confined number of wind directions and/or without considering the building surroundings effects. This paper presents the results of different simulations based on various wind flows and the CFD simulation of coupled urban wind flow and general wind directions upon a semi-closed area. Thus the importance of wind effects on the evaluation of the marina bay will be pointed out to achieve a safe and secure mooring at the berth and eventually a good potential of renewable energy for an impending green harbor.

Marina di Ravenna Tide Gauge (Italy): rescue of the initial 23 years of data (1873-1896)

NASA Astrophysics Data System (ADS)

Bruni, S.; Zerbini, S.; Raicich, F.; Errico, M.; Santi, E.

2017-12-01

The tide gauge of Marina di Ravenna, formerly Porto Corsini, Italy, has been first installed in August 1873, but its oldest records, currently available through public archives, only date back to 1896. We found historical documents reporting that the earlier data should have been preserved in the historical archives of the Istituto Geografico Militare (IGM), Florence, Italy. Even if we did not find the original tidal charts in the IGM archives, we were able to retrieve six hand-written volumes reporting the readings of the high and low waters for the period 1873-1922. These volumes and the relevant documents contain important information which allowed clarifying existing doubts on the tide gauge reference levels and constants. The 1873-1922 data were digitized, the quality was assessed as well as the reference to a common datum. With the addition of these initial 23 years of data (1873-1896), the time series of the Marina di Ravenna tide gauge spans now 144 years. The area of Marina di Ravenna was and is affected by subsidence, due to both natural and anthropogenic causes. The effects of human activities started to be noticeable since the 1920s, when the area was interested by reclamation works; during the 60s and 70s, ground-fluid extraction was responsible for subsidence rates up to several cm/year. The newly retrieved records are then particularly valuable for assessing the local sea-level trend in a period when only natural subsidence was affecting the tide-gauge observations.

Leaf water storage increases with salinity and aridity in the mangrove Avicennia marina: integration of leaf structure, osmotic adjustment and access to multiple water sources.

PubMed

Nguyen, Hoa T; Meir, Patrick; Sack, Lawren; Evans, John R; Oliveira, Rafael S; Ball, Marilyn C

2017-08-01

Leaf structure and water relations were studied in a temperate population of Avicennia marina subsp. australasica along a natural salinity gradient [28 to 49 parts per thousand (ppt)] and compared with two subspecies grown naturally in similar soil salinities to those of subsp. australasica but under different climates: subsp. eucalyptifolia (salinity 30 ppt, wet tropics) and subsp. marina (salinity 46 ppt, arid tropics). Leaf thickness, leaf dry mass per area and water content increased with salinity and aridity. Turgor loss point declined with increase in soil salinity, driven mainly by differences in osmotic potential at full turgor. Nevertheless, a high modulus of elasticity (ε) contributed to maintenance of high cell hydration at turgor loss point. Despite similarity among leaves in leaf water storage capacitance, total leaf water storage increased with increasing salinity and aridity. The time that stored water alone could sustain an evaporation rate of 1 mmol m -2  s -1 ranged from 77 to 126 min from subspecies eucalyptifolia to ssp. marina, respectively. Achieving full leaf hydration or turgor would require water from sources other than the roots, emphasizing the importance of multiple water sources to growth and survival of Avicennia marina across gradients in salinity and aridity. © 2017 John Wiley & Sons Ltd.

WATER QUALITY AT FIVE MARINAS IN LAKE TEXOMA AS RELATED TO METHYL TERT-BUTYL ETHER (MTBE)

EPA Science Inventory

Occurrence of methyl tert-butyl ether (MTBE) in five marinas was monitored between June 1999 and November 2000 in Lake Texoma located on the border of Oklahoma and Texas. MTBE is a commonly used gasoline additive and a suspected carcinogen. Lake water was collected at locations i...

Low oxygen affects photophysiology and the level of expression of two-carbon metabolism genes in the seagrass Zostera muelleri.

PubMed

Kim, Mikael; Brodersen, Kasper Elgetti; Szabó, Milán; Larkum, Anthony W D; Raven, John A; Ralph, Peter J; Pernice, Mathieu

2018-05-01

Seagrasses are a diverse group of angiosperms that evolved to live in shallow coastal waters, an environment regularly subjected to changes in oxygen, carbon dioxide and irradiance. Zostera muelleri is the dominant species in south-eastern Australia, and is critical for healthy coastal ecosystems. Despite its ecological importance, little is known about the pathways of carbon fixation in Z. muelleri and their regulation in response to environmental changes. In this study, the response of Z. muelleri exposed to control and very low oxygen conditions was investigated by using (i) oxygen microsensors combined with a custom-made flow chamber to measure changes in photosynthesis and respiration, and (ii) reverse transcription quantitative real-time PCR to measure changes in expression levels of key genes involved in C 4 metabolism. We found that very low levels of oxygen (i) altered the photophysiology of Z. muelleri, a characteristic of C 3 mechanism of carbon assimilation, and (ii) decreased the expression levels of phosphoenolpyruvate carboxylase and carbonic anhydrase. These molecular-physiological results suggest that regulation of the photophysiology of Z. muelleri might involve a close integration between the C 3 and C 4 , or other CO 2 concentrating mechanisms metabolic pathways. Overall, this study highlights that the photophysiological response of Z. muelleri to changing oxygen in water is capable of rapid acclimation and the dynamic modulation of pathways should be considered when assessing seagrass primary production.

Seasonal changes of 137Cs in benthic plants from the southern Baltic Sea.

PubMed

Zalewska, Tamara

137 Cs activity concentrations were determined in samples of macrophytes Polysiphonia fucoides (red algae) and Zostera marina (vascular plant) collected during the entire vegetation season in the Gulf of Gdańsk in the southern Baltic Sea. The measurements showed considerable seasonality of 137 Cs activity in both species; an increase of cesium concentrations was observed from spring to autumn with maximal levels 49.1 ± 1.4 Bq kg d.w. -1 ( P. fucoides ) and 14.5 ± 1.0 Bq kg d.w. -1 ( Z. marina ) in late autumn. 137 Cs concentrations observed in a given season are the result of a number of processes, the intensity of which can differ depending on external environmental conditions. The effects of these processes can differ and their directions can frequently be opposite to one another. The examined macrophytobenthic plant species could serve as bioindicators of radionuclide pollution for monitoring purposes on condition that the samples of plants are taken within a strictly defined period of the year to give comparable results and to supply realistic information about pollution levels.

Primary productivity of angiosperm and macroalgae dominated habitats in a New England Salt Marsh: a Comparative analysis

NASA Astrophysics Data System (ADS)

Roman, C. T.; Able, K. W.; Lazzari, M. A.; Heck, K. L.

1990-01-01

Net primary productivity estimates were made for the major macrophyte dominated habitats of the Nauset Marsh system, Cape Cod, Massachusetts. Above-ground primary productivity of short form Spartina alterniflora, the dominant habitat of the system, was 664 g m -2 y -1. Productivity of the other dominant angiosperm ( Zostera marina) was estimated to range from 444-987 g m -2 y -1. The marsh creekbank habitat was dominated by an intertidal zone of fucoid algae ( Ascophyllum nodosum ecad. scorpioides, 1179 g m -2 y -1; Fucus vesiculosus, 426 g m -2 y -1), mixed intertidal filamentous algae (91 g m -2 y -1), and a subtidal zone of assorted macroalgae (68 g m -2 y -1). Intertidal mudflats were dominated by Cladophora gracilis, with net production ranging from 59-637 g m -2 y -1. These angiosperm and macrophyte and macrophyte dominated habitats produce over 3 × 10 6 kg y -1 of biomass (1·2 × 10 6 kg carbon y -1). Twenty-eight per cent (28%) of this carbon production is derived from the Zostera and macroalgae habitats. Although S. alterniflora is considered the major macrophyte primary producer in Nauset Marsh and other north temperate salt marshes, it is concluded that other habitats also contribute significantly to total system carbon production.

Primary productivity of angiosperm and macroalgae dominated habitats in a New England salt marsh: a comparative analysis

USGS Publications Warehouse

Roman, C.T.; Able, K.W.; Lazzari, M.A.; Heck, K.L.

1990-01-01

Net primary productivity estimates were made for the major macrophyte dominated habitats of the Nauset Marsh system, Cape Cod, Massachusetts. Above-ground primary productivity of short form Spartina alterniflora, the dominant habitat of the system, was 664 g m-2 y-1. Productivity of the other dominant angiosperm (Zostera marina) was estimated to range from 444?987 g m-2 y-1. The marsh creekbank habitat was dominated by an intertidal zone of fucoid algae (Ascophyllum nodosum ecad. scorpioides, 1179 g m-2 y-1; Fucus vesiculosus, 426 g m-2 y-1), mixed intertidal filamentous algae (91 g m-2 y-1), and a subtidal zone of assorted macroalgae (68 g m-2 y-1). Intertidal mudflats were dominated by Cladophora gracilis, with net production ranging from 59?637 g m-2 y-1. These angiosperm and macrophyte and macrophyte dominated habitats produce over 3 ? 106 kg y-1 of biomass (1?2 ? 106 kg carbon y-1). Twenty-eight per cent (28%) of this carbon production is derived from the Zostera and macroalgae habitats. Although S. alterniflora is considered the major macrophyte primary producer in Nauset Marsh and other north temperate salt marshes, it is concluded that other habitats also contribute significantly to total system carbon production.

Nursery use of shallow habitats by epibenthic fishes in Maine nearshore waters

NASA Astrophysics Data System (ADS)

Lazzari, M. A.; Sherman, S.; Kanwit, J. K.

2003-01-01

Species richness and abundance of epibenthic fishes were quantified with daytime beam trawl tows in shallow water habitats during April-November 2000 of three mid-coast Maine estuaries: Casco Bay, Muscongus Bay and the Weskeag River. Five shallow (<10 m) habitats were sampled, Zostera marina, Laminaria longicruris, Phyllophora sp., Microciona prolifera and unvegetated sandy areas. Thirty-two species of fishes were collected. Species richness per tow was greater in Casco Bay followed by the Weskeag River and Muscongus Bay. Catch per unit effort (CPUE) of fishes was greater in Casco Bay than in the Weskeag River or Muscongus Bay. Species richness and faunal abundances were positively associated with vegetation, particularly Zostera, at all sampling locations. CPUEs of fishes were higher in Zostera primarily due to the abundance of Gasterosteus aculeatus, Apeltes quadracus, Pungitius pungitius, Myoxocephalus aenaeus, and Cylcopterus lumpus. The fish community of mid-coast estuaries was dominated by young-of-the-year (YOY) and juvenile fishes and all of the habitat types function as nursery areas. Twelve species (38%) of commercial and recreational importance were collected in the three estuaries, but the percentage was higher in Casco Bay (44%) and the Weskeag River (46%). These species included Anguilla rostrata, Clupea harengus, Gadus morhua, Microgadus tomcod, Pollachius virens, Urophycis chuss, Urophycis regia, Urophycis tenuis, Osmerus mordax, Macrozoarces americanus, Tautogolabrus adspersus, and Pleuronectes americanus. Four species, G. morhua, M. tomcod, P. virens, and U. tenuis were more common in spring than summer or autumn. P. americanus was most abundant in summer followed by spring and autumn. This study documents the importance of shallow estuarine areas in Maine as nurseries for these species.

Resilience of Zostera muelleri seagrass to small-scale disturbances: the relative importance of asexual versus sexual recovery

PubMed Central

Macreadie, Peter I; York, Paul H; Sherman, Craig DH

2014-01-01

Resilience is the ability of an ecosystem to recover from disturbance without loss of essential function. Seagrass ecosystems are key marine and estuarine habitats that are under threat from a variety of natural and anthropogenic disturbances. The ability of these ecosystems to recovery from disturbance will to a large extent depend on the internsity and scale of the disturbance, and the relative importance of sexual versus asexual reproduction within populations. Here, we investigated the resilience of Zostera muelleri seagrass (Syn. Zostera capricorni) to small-scale disturbances at four locations in Lake Macquarie – Australia's largest coastal lake – and monitored recovery over a 65-week period. Resilience of Z. muelleri varied significantly with disturbance intensity; Z. muelleri recovered rapidly (within 2 weeks) from low-intensity disturbance (shoot loss), and rates of recovery appeared related to initial shoot length. Recovery via rhizome encroachment (asexual regeneration) from high-intensity disturbance (loss of entire plant) varied among locations, ranging from 18-35 weeks, whereas the ability to recover was apparently lost (at least within the time frame of this study) when recovery depended on sexual regeneration, suggesting that seeds do not provide a mechanism of recovery against intense small-scale disturbances. The lack of sexual recruits into disturbed sites is surprising as our initial surveys of genotypic diversity (using nine polymorphic microsatellite loci) at these location indicate that populations are maintained by a mix of sexual and asexual reproduction (genotypic diversity [R] varied from 0.24 to 0.44), and populations consisted of a mosaic of genotypes with on average 3.6 unique multilocus genotypes per 300 mm diameter plot. We therefore conclude that Z. muelleri populations within Lake Macquarie rely on clonal growth to recover from small-scale disturbances and that ongoing sexual recruitment by seeds into established seagrass

Zostera marina root demography in an intertidal estuarine environment measured using minirhizotron technology

EPA Science Inventory

Over the last four decades there have been major advances in our understanding of the biology, ecology and physiology of seagrasses and their interaction with the environment. Despite these advances, there has been relatively little advancement in our understanding of the belowg...

Potential sources of bacteriological pollution for two bays with marinas in Trinidad.

PubMed

Bullock, Christine Ann; Moonesar, Indar

2005-05-01

Welcome Bay and Chaguaramas Bay in the northwest peninsula of Trinidad contain large marinas and smaller sections of bathing beaches. Bacteriological surveys were conducted at both bays to assess water quality and to determine potential sources of pollution. These surveys were conducted during the wet season of 1996 and the dry season of 1997. Eleven sample stations were established at Welcome Bay and 12 at Chaguaramas Bay. Freshwater samples were collected from rivers and drains within the survey area. Marine water samples were collected from marinas, bathing beaches and inshore and outer areas at both bays. Five water samples were collected from each sampling station during the wet season of 1996 and six during the dry season of 1997. The membrane filter technique was used to determine faecal coliform and Escherichia coli levels in all samples. There was a seasonal effect on water quality, with significantly higher faecal coliform levels in the wet season, when water quality was not in compliance with international standards. This represents a potential health risk in bathing areas. Water quality was better at the outer area of both bays. Water quality at the inner bay areas was most likely adversely affected by land-based sources of pollution identified in this study. These sources include three drains and two rivers, which discharged into the bays. Yachts were apparently not a source of sewage pollution: there was no significant relationship between yacht number and faecal coliform levels.

Immune response varies with rate of dispersal in invasive cane toads (Rhinella marina).

PubMed

Brown, Gregory P; Shine, Richard

2014-01-01

What level of immunocompetence should an animal maintain while undertaking long-distance dispersal? Immune function (surveillance and response) might be down-regulated during prolonged physical exertion due to energy depletion, and/or to avoid autoimmune reactions arising from damaged tissue. On the other hand, heightened immune vigilance might be favored if the organism encounters novel pathogens as it enters novel environments. We assessed the links between immune defense and long-distance movement in a population of invasive cane toads (Rhinella marina) in Australia. Toads were radio-tracked for seven days to measure their activity levels and were then captured and subjected to a suite of immune assays. Toads that moved further showed decreased bacteria-killing ability in their plasma and decreased phagocytic activity in their whole blood, but a heightened skin-swelling response to phytohemagglutinin. Baseline and post-stress corticosterone levels were unrelated to distance moved. Thus, long-distance movement in cane toads is associated with a dampened response in some systems and enhanced response in another. This pattern suggests that sustained activity is accompanied by trade-offs among immune components rather than an overall down or up-regulation. The finding that high mobility is accompanied by modification of the immune system has important implications for animal invasions.

Effects of microplastic on fitness and PCB bioaccumulation by the lugworm Arenicola marina (L.).

PubMed

Besseling, Ellen; Wegner, Anna; Foekema, Edwin M; van den Heuvel-Greve, Martine J; Koelmans, Albert A

2013-01-02

It has been speculated that marine microplastics may cause negative effects on benthic marine organisms and increase bioaccumulation of persistent organic pollutants (POPs). Here, we provide the first controlled study of plastic effects on benthic organisms including transfer of POPs. The effects of polystyrene (PS) microplastic on survival, activity, and bodyweight, as well as the transfer of 19 polychlorinated biphenyls (PCBs), were assessed in bioassays with Arenicola marina (L.). PS was pre-equilibrated in natively contaminated sediment. A positive relation was observed between microplastic concentration in the sediment and both uptake of plastic particles and weight loss by A. marina. Furthermore, a reduction in feeding activity was observed at a PS dose of 7.4% dry weight. A low PS dose of 0.074% increased bioaccumulation of PCBs by a factor of 1.1-3.6, an effect that was significant for ΣPCBs and several individual congeners. At higher doses, bioaccumulation decreased compared to the low dose, which however, was only significant for PCB105. PS had statistically significant effects on the organisms' fitness and bioaccumulation, but the magnitude of the effects was not high. This may be different for sites with different plastic concentrations, or plastics with a higher affinity for POPs.

Geohydrology of deep-aquifer system monitoring-well site at Marina, Monterey County, California

USGS Publications Warehouse

Hanson, Randall T.; Everett, Rhett; Newhouse, Mark W.; Crawford, Steven M.; Pimentel, M. Isabel; Smith, Gregory A.

2002-01-01

In 2000, a deep-aquifer system monitoring-well site (DMW1) was completed at Marina, California to provide basic geologic and hydrologic information about the deep-aquifer system in the coastal region of the Salinas Valley. The monitoring-well site contains four wells in a single borehole; one completed from 930 to 950 feet below land surface (bls) in the Paso Robles Formation (DMW1-4); one 1,040 to 1,060 feet below land surface in the upper Purisima Formation (DMW1-3); one from 1,410 to 1,430 feet below land surface in the middle Purisima Formation (DMW1-2); and one from 1,820 to 1,860 feet below land surface in the lower Purisima Formation (DMW1-1). The monitoring site is installed between the coast and several deep-aquifer system supply wells in the Marina Coast Water District, and the completion depths are within the zones screened in those supply wells. Sediments below a depth of 955 feet at DMW1 are Pliocene age, whereas the sediments encountered at the water-supply wells are Pleistocene age at an equivalent depth. Water levels are below sea level in DMW1 and the Marina Water District deep-aquifer system supply wells, which indicate that the potential for seawater intrusion exists in the deep-aquifer system. If the aquifers at DMW1 are hydraulically connected with the submarine outcrops in Monterey Bay, then the water levels at the DMW1 site are 8 to 27 feet below the level necessary to prevent seawater intrusion. Numerous thick fine-grained interbeds and confining units in the aquifer systems retard the vertical movement of fresh and saline ground water between aquifers and restrict the movement of seawater to narrow water-bearing zones in the upper-aquifer system.Hydraulic testing of the DMW1 and the Marina Water District supply wells indicates that the tested zones within the deep-aquifer system are transmissive water-bearing units with hydraulic conductivities ranging from 2 to 14.5 feet per day. The hydraulic properties of the supply wells and monitoring

Liver histopathology in the cane toad, Rhinella marina (Amphibia: Bufonidae), induced by Ortleppascaris sp. larvae (Nematoda: Ascarididae).

PubMed

Silva, Jefferson P E; da Silva, Djane C B; Melo, Francisco T V; Giese, Elane G; Furtado, Adriano P; Santos, Jeannie N

2013-04-01

Exposure to parasites is considered to be an important factor in the development of many diseases and histopathologies which are the result of the parasite-host interaction. The present study evaluated the impact of natural infection by larvae of Ortleppascaris sp. (Nematoda: Ascaridida) in the liver of the cane toad Rhinella marina (Linnaeus, 1758). Larvae were encysted in nodules delimited by collagenous fibers and fibroblasts or freely within the hepatic parenchyma, provoking a clear response from the host. The histological examination of the liver revealed viable larvae in a number of different developmental stages, as well as cysts filled with amorphous material and cell residues and surrounded by dense fibrotic tissue. The infection of the liver by these larvae induces a significant increase in the area occupied by melanomacrophages and a reduction or deficit in the vascularization of the liver, hypertrophy of the hepatocytes, vacuolar bodies, and cytoplasmatic granules. Focal concentrations of inflammatory infiltrates were observed enclosing the unencapsulated early-stage larvae. These results indicate that infection by Ortleppascaris sp. induces severe physiological problems and histopathological lesions in the liver of R. marina .

Metabolic engineering of the Chl d-dominated cyanobacterium Acaryochloris marina: production of a novel Chl species by the introduction of the chlorophyllide a oxygenase gene.

PubMed

Tsuchiya, Tohru; Mizoguchi, Tadashi; Akimoto, Seiji; Tomo, Tatsuya; Tamiaki, Hitoshi; Mimuro, Mamoru

2012-03-01

In oxygenic photosynthetic organisms, the properties of photosynthetic reaction systems primarily depend on the Chl species used. Acquisition of new Chl species with unique optical properties may have enabled photosynthetic organisms to adapt to various light environments. The artificial production of a new Chl species in an existing photosynthetic organism by metabolic engineering provides a model system to investigate how an organism responds to a newly acquired pigment. In the current study, we established a transformation system for a Chl d-dominated cyanobacterium, Acaryochloris marina, for the first time. The expression vector (constructed from a broad-host-range plasmid) was introduced into A. marina by conjugal gene transfer. The introduction of a gene for chlorophyllide a oxygenase, which is responsible for Chl b biosynthesis, into A. marina resulted in a transformant that synthesized a novel Chl species instead of Chl b. The content of the novel Chl in the transformant was approximately 10% of the total Chl, but the level of Chl a, another Chl in A. marina, did not change. The chemical structure of the novel Chl was determined to be [7-formyl]-Chl d(P) by mass spectrometry and nuclear magnetic resonance spectroscopy. [7-Formyl]-Chl d(P) is hypothesized to be produced by the combined action of chlorophyllide a oxygenase and enzyme(s) involved in Chl d biosynthesis. These results demonstrate the flexibility of the Chl biosynthetic pathway for the production of novel Chl species, indicating that a new organism with a novel Chl might be discovered in the future.

Changes in the distribution of the grey mangrove Avicennia marina (Forsk.) using large scale aerial color infrared photographs: are the changes related to habitat modification for mosquito control?

NASA Astrophysics Data System (ADS)

Jones, J.; Dale, P. E. R.; Chandica, A. L.; Breitfuss, M. J.

2004-09-01

Runnelling, a method of habitat modification used for mosquito management in intertidal saltmarshes in Australia, alters marsh hydrology. The objective of this research was to assess if runnelling had affected the distribution of the grey mangrove ( Avicennia marina (Forsk.)) at a study site in southeast Queensland. Since runnelling is carried out in diverse marshes a second aim was to assess differences in mangrove colonisation in the two main saltmarsh species in the area. These are marine couch [ Sporobolus virginicus (L.) Kunth.] and samphire [ Sarcocornia quinqueflora (Bunge ex Ung.-Stern.)]. Runnels at the study site were in an area dominated by Sporobolus. The mangrove area was measured by classifying digital color infrared (CIR) data obtained from aerial photographs acquired in 1982, which was 3 years before runnelling, and in 1987, 1991 and 1999, 2-14 years after. Changes in the spatial extent of A. marina were identified using difference images produced from post-classification change detection. The results showed that runnels did not significantly influence the distribution of A. marina at the study site. At a more detailed level differences in A. marina establishment in the Sporobolus and Sarcocornia areas were determined from counts of trees on the aerial photographs. There was a greater proportion of mangroves in Sarcocornia than Sporobolus and this increased over time. This may be related to differences in density between the plant species, to grapsid crab activity or to other edaphic conditions. There may be implications for runnelling in Sarcocornia marshes. The large increase observed in A. marina in the area generally is likely to be related to factors such as catchment modification or tidal/sea-level changes. It is concluded that runnelling has not led to mangrove establishment in the Sporobolus dominated saltmarsh.

Eelgrass habitat near Liberty Bay: Chapter 5

USGS Publications Warehouse

Dinicola, Richard S.; Takesue, Renee K.

2015-01-01

Seagrasses are a widespread type of marine flowering plants that grow in nearshore intertidal and subtidal zones. Seagrass beds are ecologically important because they affect physical, biological, and chemical characteristics of nearshore habitat, and they are sensitive to changes in coastal water quality (Stevenson and others, 1993; Koch, 2001; Martinez-Crego and others, 2008). Zostera marina, commonly known as eelgrass, is protected by a no-net-loss policy in Washington State where it may be used as spawning habitat by herring, a key prey species for salmon, seabirds, and marine mammals (Bargmann, 1998). Eelgrass forms broad meadows in shallow embayments or narrow fringes on open shorelines (Berry and others, 2003). Anthropogenic activities that increase turbidity, nutrient loading, and physical disturbance at the coast can result in dramatic seagrass decline (Ralph and others, 2006).

Negative effects of commercial mussel dragging on eelgrass beds in Maine

USGS Publications Warehouse

Neckles, H.A.; Short, F.T.; Barker, S.; Kopp, B.S.

2005-01-01

A study by the US Geological Survey, the University of New Hampshire, and the Maine Department of Marine Resources showed that commercial mussel dragging poses a severe and long-lasting threat to eelgrass (Zostera marina). Dragging can damage large areas, with individual drag scars up to 79 acres in size found in Maine eelgrass beds. Dragging activity uproots eelgrass plants completely, removing leaves, rhizomes, and roots. Two independent methods were used to predict the rate of eelgrass recovery in heavily dragged areas. Under the best environmental conditions, complete revegetation of a dragged area would require an average of 11 years. Under conditions less favorable for eelgrass growth, such as reduced water quality, dragged areas could require more than 20 years to recover. Protection of eelgrass from commercial shellfish dragging will preserve important coastal habitat.

Lethal effects of ichthyotoxic raphidophytes, Chattonella marina, C. antiqua, and Heterosigma akashiwo, on post-embryonic stages of the Japanese pearl oyster, Pinctada fucata martensii.

PubMed

Basti, Leila; Nagai, Kiyohito; Go, Jiyoji; Okano, Sho; Oda, Tatsuya; Tanaka, Yuji; Nagai, Satoshi

2016-11-01

The inimical effects of the ichthyotoxic harmful algal bloom (HAB)-forming raphidophytes Heterosigma akashiwo, Chattonella marina, and Chattonella antiqua on the early-life stages of the Japanese pearl oyster Pinctada fucata martensii were studied. Fertilized eggs and developing embryos were not affected following exposure to the harmful raphidophytes; however, all three algal species severely affected trochophores and D-larvae, early-stage D-larvae, and late-stage pre-settling larvae. Exposure to C. marina (5×10 2 cellsml -1 ), C. antiqua (10 3 cellsml -1 ), and H. akashiwo (5×10 3 cellsml -1 ) resulted in decreased success of metamorphosis to the trochophore stage. A complete inhibition of trochophore metamorphosis was observed following exposure to C. antiqua at 5×10 3 cellsml -1 and C. marina at 8×10 3 cellsml -1 . In all experiments, more than 80% of newly formed trochophores were anomalous, and in the case of exposure to H. akashiwo at 10 5 cellsml -1 more than 70% of D-larvae were anomalous. The activity rates of D-larvae (1-day-old) were significantly reduced following exposure to C. antiqua (8×10 3 cellsml -1 , 24h), C. marina (8×10 3 cellsml -1 , 24h), and H. akashiwo (10 4 cellsml -1 , 24h). The activity rates of pre-settling larvae (21-day-old) were also significantly reduced following exposure to C. antiqua (10 3 cellsml -1 , 24h),C. marina (8×10 3 cellsml -1 , 24h), and H. akashiwo (5×10 4 cellsml -1 , 24h). Significant mortalities of both larval stages were induced by all three raphidophytes, with higher mortality rates registered for pre-settling larvae than D-larvae, especially following exposure to C. marina (5×10 2 -8×10 3 cellsml -1 , 48-86h) and C. antiqua (10 3 -8×10 3 cellsml -1 , 72-86h). Contact between raphidophyte cells and newly metamorphosed trochophores and D-larvae, 1-day-old D-larvae, and 21-day-old larvae resulted in microscopic changes in the raphidophytes, and then, in the motile early-life stages of pearl oysters. Upon

Ecological periodic tables for benthic macrofaunal usage of estuarine habitats: Insights from a case study in Tillamook Bay, Oregon, USA

NASA Astrophysics Data System (ADS)

Ferraro, Steven P.; Cole, Faith A.

2012-05-01

This study validates the ecological relevance of estuarine habitat types to the benthic macrofaunal community and, together with previous similar studies, suggests they can serve as elements in ecological periodic tables of benthic macrofaunal usage in the bioregion. We compared benthic macrofaunal Bray-Curtis similarity and the means of eight benthic macrofaunal community measures across seven habitat types in Tillamook Bay, Oregon, USA: intertidal eelgrass (Zostera marina), dwarf eelgrass (Zostera japonica), oyster (Crassostrea gigas) ground culture, burrowing mud shrimp (Upogebia pugettensis), burrowing ghost shrimp (Neotrypaea californiensis), sand and subtidal. Benthic macrofaunal Bray-Curtis similarity differed among all the habitats except ghost shrimp and sand. The habitat rank order on mean benthic macrofaunal species richness, abundance and biomass was dwarf eelgrass ≈ oyster ≥ mud shrimp ≈ eelgrass > sand ≈ ghost shrimp ≈ subtidal. The benthic macrofaunal habitat usage pattern in Tillamook Bay was, with a few exceptions, similar to that in two other US Pacific Northwest estuaries. The exceptions indicate variants of eelgrass and ghost shrimp habitat that differ in benthic macrofaunal usage perhaps due to differences in the coarseness of the sand fraction of the sediments in which they live. The similarities indicate periodic benthic macrofaunal usage patterns across the other habitat types extend over a wider geographic scale and range of environmental conditions than previously known.

Metatranscriptomics and Amplicon Sequencing Reveal Mutualisms in Seagrass Microbiomes

PubMed Central

Crump, Byron C.; Wojahn, John M.; Tomas, Fiona; Mueller, Ryan S.

2018-01-01

Terrestrial plants benefit from many well-understood mutualistic relationships with root- and leaf-associated microbiomes, but relatively little is known about these relationships for seagrass and other aquatic plants. We used 16S rRNA gene amplicon sequencing and metatranscriptomics to assess potential mutualisms between microorganisms and the seagrasses Zostera marina and Zostera japonica collected from mixed beds in Netarts Bay, OR, United States. The phylogenetic composition of leaf-, root-, and water column-associated bacterial communities were strikingly different, but these communities were not significantly different between plant species. Many taxa present on leaves were related to organisms capable of consuming the common plant metabolic waste product methanol, and of producing agarases, which can limit the growth of epiphytic algae. Taxa present on roots were related to organisms capable of oxidizing toxic sulfur compounds and of fixing nitrogen. Metatranscriptomic sequencing identified expression of genes involved in all of these microbial metabolic processes at levels greater than typical water column bacterioplankton, and also identified expression of genes involved in denitrification and in bacterial synthesis of the plant growth hormone indole-3-acetate. These results provide the first evidence using metatranscriptomics that seagrass microbiomes carry out a broad range of functions that may benefit their hosts, and imply that microbe–plant mutualisms support the health and growth of aquatic plants. PMID:29599758

Understanding the mechanisms of antitropical divergence in the seabird White-faced Storm-petrel (Procellariiformes: Pelagodroma marina) using a multilocus approach.

PubMed

Silva, Mónica C; Matias, Rafael; Wanless, Ross M; Ryan, Peter G; Stephenson, Brent M; Bolton, Mark; Ferrand, Nuno; Coelho, M Manuela

2015-06-01

Analytical methods that apply coalescent theory to multilocus data have improved inferences of demographic parameters that are critical to understanding population divergence and speciation. In particular, at the early stages of speciation, it is important to implement models that accommodate conflicting gene trees, and benefit from the presence of shared polymorphisms. Here, we employ eleven nuclear loci and the mitochondrial control region to investigate the phylogeography and historical demography of the pelagic seabird White-faced Storm-petrel (Pelagodroma marina) by sampling subspecies across its antitropical distribution. Groups are all highly differentiated: global mitochondrial ΦST = 0.89 (P < 0.01) and global nuclear ΦST varies between 0.22 and 0.83 (all P < 0.01). The complete lineage sorting of the mitochondrial locus between hemispheres is corroborated by approximately half of the nuclear genealogies, suggesting a long-term antitropical divergence in isolation. Coalescent-based estimates of demographic parameters suggest that hemispheric divergence of P. marina occurred approximately 840 000 ya (95% HPD 582 000-1 170 000), in the absence of gene flow, and divergence within the Southern Hemisphere occurred 190 000 ya (95% HPD 96 000-600 000), both probably associated with the profound palaeo-oceanographic changes of the Pleistocene. A fledgling sampled in St Helena (tropical South Atlantic) suggests recent colonization from the Northern Hemisphere. Despite the great potential for long-distance dispersal, P. marina antitropical groups have been evolving as independent, allopatric lineages, and divergence is probably maintained by philopatry coupled with asynchronous reproductive phenology and local adaptation. © 2015 John Wiley & Sons Ltd.

EFFECT OF EELGRASS (ZOSTERA MARINA) DENSITY ON THE FEEDING EFFICIENCY OF MUMMICHOG. (R825757)

EPA Science Inventory

The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

Assessing the impacts of salinity and nutrient stress to Ruppia maritima and Zostera marina.

EPA Science Inventory

Healthy seagrass beds were once found throughout the shallow areas of Narragansett Bay, R.I. but have disappeared due to infilling, pollution and disease. In Greenwich Bay, a highly developed embayment within Narragansett Bay, Ruppia maritima has colonized an area on the northern...

ASSESSING THE IMPACTS OF SALINITY AND NUTRIENT STRESS TO RUPPIA MARITIMA AND ZOSTERA MARINA

EPA Science Inventory

Healthy seagrass beds were once found throughout the shallow areas of Narragansett Bay, R.I. but have disappeared due to infilling, pollution and disease. In Greenwich Bay, a highly developed embayment within Narragansett Bay, Ruppia maritima has colonized an area on the norther...

Effects of barium and cadmium on the population development of the marine nematode Rhabditis (Pellioditis) marina.

PubMed

Lira, V F; Santos, G A P; Derycke, S; Larrazabal, M E L; Fonsêca-Genevois, V G; Moens, T

2011-10-01

Offshore oil and gas drilling often involves the use of fluids containing barium and traces of other heavy metals. These may affect the environment, but information on their toxicity to benthic biota remains scant. Here, we present results of a 10-day bioassay with the marine nematode Rhabditis (Pellioditis) marina at different loads of barium (0-10 ,000 ppm nominal concentrations) and cadmium (0-12 ppm) in the range of concentrations reported from drilling-impacted sediments. Barium did not affect the fitness and population development of R. (P.) marina at concentrations up to 300 ppm, but did cause a decrease in population abundance and an increase in development time from concentrations of 400-2000 ppm onwards. Increased mortality occurred at 4800 ppm Ba. For cadmium, LOEC and EC₅₀ values for total population abundance were 2.95 and 8.82 ppm, respectively. Cd concentrations as low as 2.40 to 2.68 caused a decrease in the abundance of adult nematodes, indicating that assays covering more generations would likely demonstrate yet more pronounced population-level effects. Our results indicate that oil and gas drilling activities may potentially have important implications for the meiobenthos through the toxicity of barium and associated metals like cadmium. Copyright © 2011 Elsevier Ltd. All rights reserved.

Resource utilization and trophic position of nematodes and harpacticoid copepods in and adjacent to Zostera noltii beds

NASA Astrophysics Data System (ADS)

Vafeiadou, A.-M.; Materatski, P.; Adão, H.; De Troch, M.; Moens, T.

2014-01-01

This study examines the resource use and trophic position of nematodes and harpacticoid copepods at the genus/species level in an estuarine food web in Zostera noltii beds and in adjacent bare sediments, using the natural abundance of stable carbon and nitrogen isotopes. Microphytobenthos is among the main resources of most taxa, but seagrass-associated resources (i.e. seagrass detritus and epiphytes) also contribute to meiobenthos nutrition, with seagrass detritus being available also in deeper sediments and in unvegetated patches close to seagrass beds. A predominant dependence on chemoautotrophic bacteria was demonstrated for the nematode genus Terschellingia and the copepod family Cletodidae. A predatory feeding mode is illustrated for Paracomesoma and other Comesomatidae, which were previously considered first-level consumers (deposit feeders) according to their buccal morphology. The considerable variation found in both resource use and trophic level among nematode genera from the same feeding type, and even among congeneric nematode species, shows that interpretation of nematode feeding ecology based purely on mouth morphology should be avoided.

A survey of antifoulants in sediments from Ports and Marinas along the French Mediterranean coast.

PubMed

Cassi, Roberto; Tolosa, Imma; de Mora, Stephen

2008-11-01

Due to deleterious effects on non-target organisms, the use of organotin compounds on boat hulls of small vessels (<25 m) has been widely prohibited. The International Maritime Organisation (IMO) resolved that the complete prohibition on organotin compounds acting as biocides in antifouling systems should commence in 2008. As a result of restrictions on the use of organotin based paints, other antifouling formulations containing organic biocides have been utilised. This survey was conducted to assess the contamination of replacement biocides in the marine environment following the ban of TBT-based paints. Surface sediments samples were collected in the major ports and marinas along the France Mediterranean coastline (Cote d'Azur) and analysed for organotin compounds, Irgarol 1051, Sea-nine 211, Chlorothalonil, Dichlofluanid and Folpet. Every port and marina exhibited high levels of organotin compounds, with concentrations in sediments ranging from 37 ng Sn g(-1) dry wt in Menton Garavan to over 4000 ng Sn g(-1) dry wt close to the ship chandler within the port of Villefranche-sur-Mer. TBT degradation indexes suggested that fresh inputs are still made. Among the other antifoulants monitored, only Irgarol 1051 exhibited measurable concentrations in almost every port, with concentrations ranging from 40 ng g(-1) dry wt (Cannes) to almost 700 ng g(-1) dry wt (Villefranche-sur-Mer, ship chandler).

Ecology of eelgrass meadows of the Atlantic Coast: a community profile

DOE Office of Scientific and Technical Information (OSTI.GOV)

Thayer, G.W.; Kenworthy, W.J.; Fonseca, M.S.

1984-07-01

Eelgrass, Zostera marina, dominates the ecologically important but fragile seagrass communities along the east coast of the United States from North Carolina to Nova Scotia. Grasslike leaves and an extensive root and rhizome system enable eelgrass to exist in a shallow aquatic environment subject to waves, tides, and shifting sediments. Eelgrass meadows are highly productive, frequently rivaling agricultural croplands. They provide shelter and a rich variety of primary and secondary food resources, and form a nursery habitat for the life history stages of numerous fishery organisms. The leaves absorb and release nutrients, provide surfaces for attachment, reduce water current velocity,more » turbulence and scour, and promote accumulation of detritus. Rhizomes provide protection for benthic infauna and enhance sediment stability. Roots absorb and release nutrients to interstitial waters. Because of their shallow, subtidal existence, seagrasses are susceptible to perturbations of both the water column and sediments. Eelgrass meadows are impacted by dredging and filling, some commercial fishery harvest techniques, modification of normal temperature and salinity regimes, and addition of chemical wastes. Techniques have been developed to successfully restore eelgrass habitats, but a holistic approach to planning research and environmentally-related decisions is needed to avoid cumulative environmental impacts on these vital nursery areas. 64 figures, 16 tables.« less

Isolation and characterization of a SEPALLATA-like gene, ZjMADS1, from marine angiosperm Zostera japonica.

PubMed

Kakinuma, Makoto; Inoue, Miho; Morita, Teruwo; Tominaga, Hiroshi; Maegawa, Miyuki; Coury, Daniel A; Amano, Hideomi

2012-05-01

In flowering plants, floral homeotic MADS-box genes, which constitute a large multigene family, play important roles in the specification of floral organs as defined by the ABCDE model. In this study, a MADS-box gene, ZjMADS1, was isolated and characterized from the marine angiosperm Zostera japonica. The predicted length of the ZjMADS1 protein was 246 amino acids (AA), and the AA sequence was most similar to those of the SEPALLATA (SEP) subfamily, corresponding to E-function genes. Southern blot analysis suggested the presence of two SEP3-like genes in the Z. japonica genome. ZjMADS1 mRNA levels were extremely high in the spadices, regardless of the developmental stage, compared to other organs from the reproductive and vegetative shoots. These results suggest that the ZjMADS1 gene may be involved in spadix development in Z. japonica and act as an E-function gene in floral organ development in marine angiosperms. Copyright © 2011 Elsevier Ltd. All rights reserved.

Characteristics and Predictors of Early and Delayed Responders to Ranibizumab Treatment in Neovascular Age-Related Macular Degeneration: A Retrospective Analysis from the ANCHOR, MARINA, HARBOR, and CATT Trials.

PubMed

Gale, Richard; Korobelnik, Jean-Francois; Yang, Yit; Wong, Tien Y

2016-01-01

This retrospective review examined visual acuity (VA) in subjects with neovascular age-related macular degeneration and identified early and delayed response to ranibizumab. MARINA, ANCHOR, HARBOR, and CATT published data were examined for response with monthly versus individualized dosing and predictors of early versus delayed response. Data were available for 1,631 subjects; 18-29% were early gainers and 15-16% were delayed gainers. Of the early gainers, 72-83% maintained their best-corrected VA gain at month 12 with monthly or individualized dosing. Delayed gainers in HARBOR almost reached the same level of response as early gainers by 12 months who were able to maintain their response. The main predictor of response was baseline VA. There are two distinct types of ranibizumab response; some responded by month 3, while others took up to 12 months. In delayed responders, this may have implications for switching or not switching therapies. © 2016 The Author(s) Published by S. Karger AG, Basel.

Survey of helminths, ectoparasites, and chytrid fungus of an introduced population of cane toads, Rhinella marina (Anura: Bufonidae), from Grenada

USGS Publications Warehouse

Drake, Michael C.; Zieger, Ulrike; Groszkowski, Andrew; Gallardo, Bruce; Sages, Patti; Reavis, Roslyn; Faircloth, Leslie; Jacobson, Krystin; Lonce, Nicholas; Pinckney, Rhonda D.; Cole, Rebecca A.

2014-01-01

One hundred specimens of Rhinella marina, (Anura: Bufonidae) collected in St. George's parish, Grenada, from September 2010 to August 2011, were examined for the presence of ectoparasites and helminths. Ninety-five (95%) were parasitized by 1 or more parasite species. Nine species of parasites were found: 1 digenean, 2 acanthocephalans, 4 nematodes, 1 arthropod and 1 pentastome. The endoparasites represented 98.9% of the total number of parasite specimens collected. Grenada represents a new locality record for Mesocoelium monas, Raillietiella frenatus, Pseudoacanthacephalus sp., Aplectana sp., Physocephalus sp., Acanthacephala cystacanth, and Physalopteridae larvae. The digenean M. monas occurred with the highest prevalence of 82%, contrasting many studies of R. marina where nematodes dominate the parasite infracommunity. Female toads were found to have a significantly higher prevalence of Amblyomma dissimile than male toads. Only 2 parasites exhibited a significant difference between wet and dry season with Parapharyngodon grenadensis prevalence highest in the wet season and A. dissimile prevalence highest during the dry season. Additionally, A. dissimilewas significantly more abundant during the dry season.

Back to the sea twice: identifying candidate plant genes for molecular evolution to marine life.

PubMed

Wissler, Lothar; Codoñer, Francisco M; Gu, Jenny; Reusch, Thorsten B H; Olsen, Jeanine L; Procaccini, Gabriele; Bornberg-Bauer, Erich

2011-01-12

Seagrasses are a polyphyletic group of monocotyledonous angiosperms that have adapted to a completely submerged lifestyle in marine waters. Here, we exploit two collections of expressed sequence tags (ESTs) of two wide-spread and ecologically important seagrass species, the Mediterranean seagrass Posidonia oceanica (L.) Delile and the eelgrass Zostera marina L., which have independently evolved from aquatic ancestors. This replicated, yet independent evolutionary history facilitates the identification of traits that may have evolved in parallel and are possible instrumental candidates for adaptation to a marine habitat. In our study, we provide the first quantitative perspective on molecular adaptations in two seagrass species. By constructing orthologous gene clusters shared between two seagrasses (Z. marina and P. oceanica) and eight distantly related terrestrial angiosperm species, 51 genes could be identified with detection of positive selection along the seagrass branches of the phylogenetic tree. Characterization of these positively selected genes using KEGG pathways and the Gene Ontology uncovered that these genes are mostly involved in translation, metabolism, and photosynthesis. These results provide first insights into which seagrass genes have diverged from their terrestrial counterparts via an initial aquatic stage characteristic of the order and to the derived fully-marine stage characteristic of seagrasses. We discuss how adaptive changes in these processes may have contributed to the evolution towards an aquatic and marine existence.

Resource utilization and trophic position of nematodes and harpacticoid copepods in and adjacent to Zostera noltii beds

NASA Astrophysics Data System (ADS)

Vafeiadou, A.-M.; Materatski, P.; Adão, H.; De Troch, M.; Moens, T.

2014-07-01

This study examines the resource use and trophic position of nematodes and harpacticoid copepods at the genus/species level in an estuarine food web in Zostera noltii beds and in adjacent bare sediments using the natural abundance of stable carbon and nitrogen isotopes. Microphytobenthos and/or epiphytes are among the main resources of most taxa, but seagrass detritus and sediment particulate organic matter contribute as well to meiobenthos nutrition, which are also available in deeper sediment layers and in unvegetated patches close to seagrass beds. A predominant dependence on chemoautotrophic bacteria was demonstrated for the nematode genus Terschellingia and the copepod family Cletodidae. A predatory feeding mode is illustrated for Paracomesoma and other Comesomatidae, which were previously considered first-level consumers (deposit feeders) according to their buccal morphology. The considerable variation found in both resource use and trophic level among nematode genera from the same feeding type, and even among congeneric nematode species, shows that the interpretation of nematode feeding ecology based purely on mouth morphology should be avoided.

Exploiting intraspecific competitive mechanisms to control invasive cane toads (Rhinella marina)

PubMed Central

Crossland, Michael R.; Haramura, Takashi; Salim, Angela A.; Capon, Robert J.; Shine, Richard

2012-01-01

If invasive species use chemical weapons to suppress the viability of conspecifics, we may be able to exploit those species-specific chemical cues for selective control of the invader. Cane toads (Rhinella marina) are spreading through tropical Australia, with negative effects on native species. The tadpoles of cane toads eliminate intraspecific competitors by locating and consuming newly laid eggs. Our laboratory trials show that tadpoles find those eggs by searching for the powerful bufadienolide toxins (especially, bufogenins) that toads use to deter predators. Using those toxins as bait, funnel-traps placed in natural waterbodies achieved near-complete eradication of cane toad tadpoles with minimal collateral damage (because most native (non-target) species are repelled by the toads' toxins). More generally, communication systems that have evolved for intraspecific conflict provide novel opportunities for invasive-species control. PMID:22696528

Global-Scale Structure of the Eelgrass Microbiome.

PubMed

Fahimipour, Ashkaan K; Kardish, Melissa R; Lang, Jenna M; Green, Jessica L; Eisen, Jonathan A; Stachowicz, John J

2017-06-15

Plant-associated microorganisms are essential for their hosts' survival and performance. Yet, most plant microbiome studies to date have focused on terrestrial species sampled across relatively small spatial scales. Here, we report the results of a global-scale analysis of microbial communities associated with leaf and root surfaces of the marine eelgrass Zostera marina throughout its range in the Northern Hemisphere. By contrasting host microbiomes with those of surrounding seawater and sediment, we uncovered the structure, composition, and variability of microbial communities associated with eelgrass. We also investigated hypotheses about the assembly of the eelgrass microbiome using a metabolic modeling approach. Our results reveal leaf communities displaying high variability and spatial turnover that mirror their adjacent coastal seawater microbiomes. By contrast, roots showed relatively low compositional turnover and were distinct from surrounding sediment communities, a result driven by the enrichment of predicted sulfur-oxidizing bacterial taxa on root surfaces. Predictions from metabolic modeling of enriched taxa were consistent with a habitat-filtering community assembly mechanism whereby similarity in resource use drives taxonomic cooccurrence patterns on belowground, but not aboveground, host tissues. Our work provides evidence for a core eelgrass root microbiome with putative functional roles and highlights potentially disparate processes influencing microbial community assembly on different plant compartments. IMPORTANCE Plants depend critically on their associated microbiome, yet the structure of microbial communities found on marine plants remains poorly understood in comparison to that for terrestrial species. Seagrasses are the only flowering plants that live entirely in marine environments. The return of terrestrial seagrass ancestors to oceans is among the most extreme habitat shifts documented in plants, making them an ideal testbed for the

Occurrence, fate, and fluxes of perfluorochemicals (PFCs) in an urban catchment: Marina Reservoir, Singapore.

PubMed

Nguyen, Viet Tung; Gin, Karina Yew-Hoong; Reinhard, Martin; Liu, Changhui

2012-01-01

A study was carried out to characterize the occurrence, sources and sinks of perfluorochemicals (PFCs) in the Marina Catchment and Reservoir, Singapore. Salinity depth profiles indicated the reservoir was stratified with lower layers consisting of sea water (salinity ranging from 32 to 35 g L(-1)) and a brackish surface layer containing approximately 14-65% seawater. The PFC mixture detected in catchment waters contained perfluoroalkyl carboxylates (PFCAs), particularly perfluorooctanoate (PFOA), perfluorohexanoate (PFHpA), perfluorooctane sulfonate (PFOS) and PFC transformation products. PFC concentrations in storm runoff were generally higher than those in dry weather flow of canals and rivers. PFC concentration profiles measured during storm events indicated 'first flush' behavior, probably because storm water is leaching PFC compounds from non-point sources present in the catchment area. Storm runoff carries high concentrations of suspended solids (SS), which suggests that PFC transport is via SS. In Marina Bay, PFCs are deposited in the sediments along with the SS. In sediments, the total PFC concentration was 4,700 ng kg(-1), approximately 200 times higher than in the bottom water layers. Total perfluoroalkyl sulfonates (PFSAs), particularly PFOS and 6:2 fluoro telomer sulfonate (6:2 FtS) were dominant PFCs in the sediments. PFC sorption by sediments varied with perfluorocarbon chain length, type of functional group and sediment characteristics. A first approximation analysis based on SS transport suggested that the annual PFC input into the reservoir was approximately 35 ± 12 kg y(-1). Contributions of SS, dry weather flow of river/canals, and rainfall were approximately 70, 25 and 5%, respectively. This information will be useful for improving strategies to protect the reservoir from PFC contamination.

IMPACTS OF SALINITY AND NUTRIENT STRESS TO RUPPIA MARITIMA AND ZOSTERA MARINA: A MESOCOSM EXPERIMENT

EPA Science Inventory

Healthy seagrass beds were once found throughout the shallow areas of Narragansett Bay, R.I. but have disappeared due to infilling, pollution and disease. In Greenwich Bay, a highly developed embayment within Narragansett Bay, Ruppia maritima has colonized an area on the norther...

In situ impact of petrochemicals on the photosynthesis of the seagrass Zostera capricorni.

PubMed

Macinnis-Ng, Catriona M O; Ralph, Peter J

2003-11-01

We used photosynthetic activity (measured as chlorophyll a fluorescence) and photosynthetic pigment concentrations to assess the effect of pulsed exposures of aged crude oil (Champion Crude), dispersant (VDC) and an oil+dispersant mixture on the seagrass Zostera capricorni Aschers in laboratory and field experiments, using custom-made chambers. Samples were exposed for 10 h to 0.25% and 0.1% concentrations of aged crude oil and dispersant as well as mixtures of 0.25% oil+0.05% dispersant and 0.1% oil+0.02% dispersant. During this time and for the subsequent four day recovery period, the maximum and effective quantum yields of photosystem II (Fv/Fm and DeltaF/Fm' respectively) were measured. In the laboratory experiments, both values declined in response to oil exposure and remained low during the recovery period. Dispersant exposure caused a decline in both values during the recovery period, while the mixture of aged crude oil+dispersant had little impact on both quantum yields. In situ samples were less sensitive than laboratory samples, showing no photosynthetic impact due to dispersant and oil+dispersant mixture. Despite an initial decline in DeltaF/Fm', in situ oil-exposed samples recovered by the end of the experiment. Chlorophyll pigment analysis showed only limited ongoing impact in both laboratory and field situations. This study suggests that laboratory experiments may overestimate the ongoing impact of petrochemicals on seagrass whilst the dispersant VDC can reduce the impact of oil on seagrass photosynthesis.

Genome-wide survey of the seagrass Zostera muelleri suggests modification of the ethylene signalling network.

PubMed

Golicz, Agnieszka A; Schliep, Martin; Lee, Huey Tyng; Larkum, Anthony W D; Dolferus, Rudy; Batley, Jacqueline; Chan, Chon-Kit Kenneth; Sablok, Gaurav; Ralph, Peter J; Edwards, David

2015-03-01

Seagrasses are flowering plants which grow fully submerged in the marine environment. They have evolved a range of adaptations to environmental challenges including light attenuation through water, the physical stress of wave action and tidal currents, high concentrations of salt, oxygen deficiency in marine sediment, and water-borne pollination. Although, seagrasses are a key stone species of the costal ecosystems, many questions regarding seagrass biology and evolution remain unanswered. Genome sequence data for the widespread Australian seagrass species Zostera muelleri were generated and the unassembled data were compared with the annotated genes of five sequenced plant species (Arabidopsis thaliana, Oryza sativa, Phoenix dactylifera, Musa acuminata, and Spirodela polyrhiza). Genes which are conserved between Z. muelleri and the five plant species were identified, together with genes that have been lost in Z. muelleri. The effect of gene loss on biological processes was assessed on the gene ontology classification level. Gene loss in Z. muelleri appears to influence some core biological processes such as ethylene biosynthesis. This study provides a foundation for further studies of seagrass evolution as well as the hormonal regulation of plant growth and development. © The Author 2015. Published by Oxford University Press on behalf of the Society for Experimental Biology.

In situ impact of multiple pulses of metal and herbicide on the seagrass, Zostera capricorni.

PubMed

Macinnis-Ng, Catriona M O; Ralph, Peter J

2004-04-28

Tides and freshwater inflow which influence water movement in estuarine areas govern the exposure-regime of pollutants. In this experiment, we examined the in situ impact of double pulses of copper and the herbicide Irgarol 1051 on the photosynthesis of the seagrass, Zostera capricorni. Despite a 4-day recovery period between the two 10h pulses of toxicant, the effective quantum yield of photosystem II (DeltaF/Fm') and total chlorophyll concentrations indicated that multiple-pulses had a greater impact than a single pulse. During the first exposure period, samples exposed to Irgarol 1051 had DeltaF/Fm' values as low as zero while controls remained around 0.6 relative units. After the second exposure period, treated samples recovered to only 0.4 relative units. Samples exposed to copper had DeltaF/Fm' values around 0.3 relative units during the first exposure period and while these samples recovered before the second dose, they remained below 0.2 relative units after the second exposure period. Alternate samples were also exposed to one toxicant, allowed to recover and then exposed to the other toxicant. DeltaF/Fm' values indicated that copper exposure followed by Irgarol 1051 exposure was more toxic than Irgarol 1051 exposure followed by copper exposure.

Proteomic analysis on mangrove plant Avicennia marina leaves reveals nitric oxide enhances the salt tolerance by up-regulating photosynthetic and energy metabolic protein expression.

PubMed

Shen, Zhi-Jun; Chen, Juan; Ghoto, Kabir; Hu, Wen-Jun; Gao, Gui-Feng; Luo, Mei-Rong; Li, Zan; Simon, Martin; Zhu, Xue-Yi; Zheng, Hai-Lei

2018-06-15

Avicennia marina (Forsk.) Vierh is one of the most salt-tolerant mangrove species. Our previous study revealed that nitric oxide (NO) enhanced the salt tolerance of A. marina by promoting salt secretion and Na+ sequestration under salt stress. However, little is known about the regulation of NO on proteomic profiling for this mangrove species. In this study, we used sodium nitroprusside (SNP), an NO donor, to investigate the regulatory mechanism of NO on salt tolerance of A. marina according to physiological and proteomic aspects. Photosynthesis data showed that the reduction in photosynthesis caused by high salinity treatment (400 mM NaCl) could be partially recovered by addition of SNP (100 μM). Further analysis revealed that the high salinity treatment could induce not only the stomatal limitation but also non-stomatal limitation on photosynthetic reduction, while SNP addition could restore the non-stomatal limitation, implying that the application of SNP was beneficial to the metabolic process in leaves. Proteomic analysis identified 49 differentially expressed proteins involved in various biological processes such as photosynthesis, energy metabolism, primary metabolism, RNA transcription, protein translation and stress response proteins. Under high salinity treatment, the abundances of proteins related to photosynthesis, such as ribulose-phosphate 3-epimerase (RPE, spot 3), RuBisCO large subunit (RBCL, spot 4, 5, 24), RuBisCO activase A (RCA, spot 17, 18) and quinine oxidoreductase-like protein isoform 1 (QOR1, spot 23), were significantly decreased. However, the abundance of proteins such as RBCL (spot 5, 9) and QOR1 (spot 23) were increased by SNP addition. In addition, exogenous NO supply alleviated salt tolerance by increasing the accumulation of some proteins involved in energy metabolism (spot 15), primary metabolism (spot 25, 45, 46), RNA transcription (spot 36) and stress response proteins (spot 12, 21, 26, 37, 43). The transcriptional levels of nine

Algicidal and growth-inhibiting bacteria associated with seagrass and macroalgae beds in Puget Sound, WA, USA.

PubMed

Inaba, Nobuharu; Trainer, Vera L; Onishi, Yuka; Ishii, Ken-Ichiro; Wyllie-Echeverria, Sandy; Imai, Ichiro

2017-02-01

The algicidal and growth-inhibiting bacteria associated with seagrasses and macroalgae were characterized during the summer of 2012 and 2013 throughout Puget Sound, WA, USA. In 2012, Heterosigma akashiwo-killing bacteria were observed in concentrations of 2.8×10 6 CFUg -1 wet in the outer organic layer (biofilm) on the common eelgrass (Zostera marina) in north Padilla Bay. Bacteria that inhibited the growth of Alexandrium tamarense were detected within the biofilm formed on the eelgrass canopy at Dumas Bay and North Bay at densities of ∼10 8 CFUg -1 wet weight. Additionally, up to 4100CFUmL -1 of algicidal and growth-inhibiting bacteria affecting both A. tamarense and H. akashiwo were detected in seawater adjacent to seven different eelgrass beds. In 2013, H. akashiwo-killing bacteria were found on Z. marina and Ulva lactuca with the highest densities of ∼10 8 CFUg -1 wet weight at Shallow Bay, Sucia Island. Bacteria that inhibited the growth of H. akashiwo and A. tamarense were also detected on Z. marina and Z. japonica at central Padilla Bay. Heterosigma akashiwo cysts were detected at a concentration of 3400cystsg -1 wet weight in the sediment from Westcott Bay (northern San Juan Island), a location where eelgrass disappeared in 2002. These findings provide new insights on the ecology of algicidal and growth-inhibiting bacteria, and suggest that seagrass and macroalgae provide an environment that may influence the abundance of harmful algae in this region. This work highlights the importance of protection and restoration of native seagrasses and macroalgae in nearshore environments, in particular those regions where shellfish restoration initiatives are in place to satisfy a growing demand for seafood. Copyright © 2016 Elsevier B.V. All rights reserved.

Release and Consumption of DMSP from Emiliania Huxleyi during grazing by Oxyrrhis Marina

NASA Technical Reports Server (NTRS)

Wolfe, Gordon V.; Sherr, Evelyn B.; Sherr, Barry F.

1994-01-01

Degradation and release to solution of intracellular dimethylsulfoniopropionate (DMSP) from Emiliania huxleyi 370 was observed during grazing by the heterotrophic dinoflagellate Oxyrrhis marina in 24 h bottle incubations. Between 30 and 70% of the lost algal DMSP was metabolized by the grazers without production of dimethylsulfide (DMS) when grazer densities were 150 to 450/ml. The rest was released to solution and about 30% was converted to DMS by bacteria associated with the grazer culture. These experiments demonstrate that grazing by herbivorous protists may be an important sink for DMSP in marine waters, removing a potential source of DMS. Microzooplankton grazing may also indirectly increase the production of DMS by transferring algal DMSP to the dissolved pool, making it available for bacterial metabolism.

High-quality draft genome sequence of Kocuria marina SO9-6, an actinobacterium isolated from a copper mine

PubMed Central

Castro, Daniel B.A.; Pereira, Letícia Bianca; Silva, Marcus Vinícius M. e; Silva, Bárbara P. da; Palermo, Bruna Rafaella Z.; Carlos, Camila; Belgini, Daiane R.B.; Limache, Elmer Erasmo G.; Lacerda, Gileno V. Jr; Nery, Mariana B.P.; Gomes, Milene B.; Souza, Salatiel S. de; Silva, Thiago M. da; Rodrigues, Viviane D.; Paulino, Luciana C.; Vicentini, Renato; Ferraz, Lúcio F.C.; Ottoboni, Laura M.M.

2015-01-01

An actinobacterial strain, designated SO9-6, was isolated from a copper iron sulfide mineral. The organism is Gram-positive, facultatively anaerobic, and coccoid. Chemotaxonomic and phylogenetic properties were consistent with its classification in the genus Kocuria. Here, we report the first draft genome sequence of Kocuria marina SO9-6 under accession JROM00000000 (http://www.ncbi.nlm.nih.gov/nuccore/725823918), which provides insights for heavy metal bioremediation and production of compounds of biotechnological interest. PMID:26484219

Towards a more ecologically relevant assessment of the impact of heavy metals on the photosynthesis of the seagrass, Zostera capricorni.

PubMed

Macinnis-Ng, Catriona M O; Ralph, Peter J

2002-01-01

This in situ study used photosynthetic activity (measured as chlorophyll a fluorescence) and photosynthetic pigment concentrations to assess the effect of copper, cadmium, lead and zinc on the seagrass Zostera capricorni. Custom-made portable in situ exposure (PIE) chambers were developed so seagrasses could be dosed within the meadow. Z capricorni was exposed to 0.1 and I mg l(-1) of metal solutions for 10 h. During this time and for the subsequent four-day recovery period, the effective quantum yield of photosystem II (PS II) (deltaF/Fm') was measured. While the results were variable, copper and zinc exposed samples had a depressed deltaF/Fm' during the exposure period. Samples exposed to zinc recovered to pre-exposure levels but those exposed to copper did not. Cadmium and lead did not impact on the chlorophyll a fluorescence and the chlorophyll pigment data supported these findings. This study presents an innovative new application of chlorophyll a fluorescence stress assessment.

Photosynthesis at the far-red region of the spectrum in Acaryochloris marina.

PubMed

Badshah, Syed Lal; Mabkhot, Yahia; Al-Showiman, Salim S

2017-05-19

Acaryochloris marina is an oxygenic cyanobacterium that utilizes far-red light for photosynthesis. It has an expanded genome, which helps in its adaptability to the environment, where it can survive on low energy photons. Its major light absorbing pigment is chlorophyll d and it has α-carotene as a major carotenoid. Light harvesting antenna includes the external phycobilin binding proteins, which are hexameric rods made of phycocyanin and allophycocyanins, while the small integral membrane bound chlorophyll binding proteins are also present. There is specific chlorophyll a molecule in both the reaction center of Photosystem I (PSI) and PSII, but majority of the reaction center consists of chlorophyll d. The composition of the PSII reaction center is debatable especially the role and position of chlorophyll a in it. Here we discuss the photosystems of this bacterium and its related biology.

Digestive proteases of the lugworm (Arenicola marina) inhibited by Cu from contaminated sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chen, Z.; Mayer, L.M.

1998-03-01

The authors examined potential toxic effects of copper released from contaminated sediments during deposit feeding of the lugworm, Arenicola marina. Titration of Cu solution into gut fluids can result in decreases in protease activity if sufficient Cu is added. The effects of Cu on gut proteases were confirmed by incubation of gut fluids with Cu-contaminated harbor sediments. Monitoring of Cu titration into gut fluids shows that enzyme inhibition and quenching of gut protein fluorescence occur only when sufficient Cu has been added to allow inorganic Cu species to become abundant. This threshold level probably represents the exhaustion of strong bindingmore » sites that act as protection against enzyme inhibition. Thus, sediments contaminated with Cu may have inhibitory effects on digestive processes in lugworms.« less

The influence of wave energy and sediment transport on seagrass distribution

USGS Publications Warehouse

Stevens, Andrew W.; Lacy, Jessica R.

2012-01-01

A coupled hydrodynamic and sediment transport model (Delft3D) was used to simulate the water levels, waves, and currents associated with a seagrass (Zostera marina) landscape along a 4-km stretch of coast in Puget Sound, WA, USA. A hydroacoustic survey of seagrass percent cover and nearshore bathymetry was conducted, and sediment grain size was sampled at 53 locations. Wave energy is a primary factor controlling seagrass distribution at the site, accounting for 73% of the variability in seagrass minimum depth and 86% of the variability in percent cover along the shallow, sandy portions of the coast. A combination of numerical simulations and a conceptual model of the effect of sea-level rise on the cross-shore distribution of seagrass indicates that the area of seagrass habitat may initially increase and that wave dynamics are an important factor to consider in predicting the effect of sea-level rise on seagrass distributions in wave-exposed areas.

Biodiversity mediates top-down control in eelgrass ecosystems: a global comparative-experimental approach.

PubMed

Duffy, J Emmett; Reynolds, Pamela L; Boström, Christoffer; Coyer, James A; Cusson, Mathieu; Donadi, Serena; Douglass, James G; Eklöf, Johan S; Engelen, Aschwin H; Eriksson, Britas Klemens; Fredriksen, Stein; Gamfeldt, Lars; Gustafsson, Camilla; Hoarau, Galice; Hori, Masakazu; Hovel, Kevin; Iken, Katrin; Lefcheck, Jonathan S; Moksnes, Per-Olav; Nakaoka, Masahiro; O'Connor, Mary I; Olsen, Jeanine L; Richardson, J Paul; Ruesink, Jennifer L; Sotka, Erik E; Thormar, Jonas; Whalen, Matthew A; Stachowicz, John J

2015-07-01

Nutrient pollution and reduced grazing each can stimulate algal blooms as shown by numerous experiments. But because experiments rarely incorporate natural variation in environmental factors and biodiversity, conditions determining the relative strength of bottom-up and top-down forcing remain unresolved. We factorially added nutrients and reduced grazing at 15 sites across the range of the marine foundation species eelgrass (Zostera marina) to quantify how top-down and bottom-up control interact with natural gradients in biodiversity and environmental forcing. Experiments confirmed modest top-down control of algae, whereas fertilisation had no general effect. Unexpectedly, grazer and algal biomass were better predicted by cross-site variation in grazer and eelgrass diversity than by global environmental gradients. Moreover, these large-scale patterns corresponded strikingly with prior small-scale experiments. Our results link global and local evidence that biodiversity and top-down control strongly influence functioning of threatened seagrass ecosystems, and suggest that biodiversity is comparably important to global change stressors. © 2015 John Wiley & Sons Ltd/CNRS.

Food habits of mute swans in the Chesapeake Bay

USGS Publications Warehouse

Perry, M.C.; Osenton, P.C.; Lohnes, E.J.R.; Perry, Matthew C.

2004-01-01

Unlike the tundra swan (Cygnus columbianus) that migrate to the Bay for the winter, the mute swan (Cygnus olor) is a year long resident and therefore has raised concerns among research managers over reports of conflicts with nesting native water birds and the consumption of submerged aquatic vegetation (SAV). Although data on the reduction of SAV by nesting mute swans and their offspring during the spring and summer are limited, food-habits data show that mute swans rely heavily on SAV during these months. Analyses of the gullet and gizzard of mute swans indicate that widgeon grass (Ruppia maritima) and eelgrass (Zostera marina) were the most important food items to mute swans during the winter and spring. Other organisms were eaten by mute swans, but represent small percentages of food. Corn (Zea mays) fed to the swans by Bay residents in late winter probably supplements their limited vegetative food resources at that time of year.

The MARINA Risk Assessment Strategy: A Flexible Strategy for Efficient Information Collection and Risk Assessment of Nanomaterials

PubMed Central

Bos, Peter M. J.; Gottardo, Stefania; Scott-Fordsmand, Janeck J.; van Tongeren, Martie; Semenzin, Elena; Fernandes, Teresa F.; Hristozov, Danail; Hund-Rinke, Kerstin; Hunt, Neil; Irfan, Muhammad-Adeel; Landsiedel, Robert; Peijnenburg, Willie J. G. M.; Sánchez Jiménez, Araceli; van Kesteren, Petra C. E.; Oomen, Agnes G.

2015-01-01

An engineered nanomaterial (ENM) may actually consist of a population of primary particles, aggregates and agglomerates of various sizes. Furthermore, their physico-chemical characteristics may change during the various life-cycle stages. It will probably not be feasible to test all varieties of all ENMs for possible health and environmental risks. There is therefore a need to further develop the approaches for risk assessment of ENMs. Within the EU FP7 project Managing Risks of Nanoparticles (MARINA) a two-phase risk assessment strategy has been developed. In Phase 1 (Problem framing) a base set of information is considered, relevant exposure scenarios (RESs) are identified and the scope for Phase 2 (Risk assessment) is established. The relevance of an RES is indicated by information on exposure, fate/kinetics and/or hazard; these three domains are included as separate pillars that contain specific tools. Phase 2 consists of an iterative process of risk characterization, identification of data needs and integrated collection and evaluation of data on the three domains, until sufficient information is obtained to conclude on possible risks in a RES. Only data are generated that are considered to be needed for the purpose of risk assessment. A fourth pillar, risk characterization, is defined and it contains risk assessment tools. This strategy describes a flexible and efficient approach for data collection and risk assessment which is essential to ensure safety of ENMs. Further developments are needed to provide guidance and make the MARINA Risk Assessment Strategy operational. Case studies will be needed to refine the strategy. PMID:26633430

The MARINA Risk Assessment Strategy: A Flexible Strategy for Efficient Information Collection and Risk Assessment of Nanomaterials.

PubMed

Bos, Peter M J; Gottardo, Stefania; Scott-Fordsmand, Janeck J; van Tongeren, Martie; Semenzin, Elena; Fernandes, Teresa F; Hristozov, Danail; Hund-Rinke, Kerstin; Hunt, Neil; Irfan, Muhammad-Adeel; Landsiedel, Robert; Peijnenburg, Willie J G M; Sánchez Jiménez, Araceli; van Kesteren, Petra C E; Oomen, Agnes G

2015-11-27

An engineered nanomaterial (ENM) may actually consist of a population of primary particles, aggregates and agglomerates of various sizes. Furthermore, their physico-chemical characteristics may change during the various life-cycle stages. It will probably not be feasible to test all varieties of all ENMs for possible health and environmental risks. There is therefore a need to further develop the approaches for risk assessment of ENMs. Within the EU FP7 project Managing Risks of Nanoparticles (MARINA) a two-phase risk assessment strategy has been developed. In Phase 1 (Problem framing) a base set of information is considered, relevant exposure scenarios (RESs) are identified and the scope for Phase 2 (Risk assessment) is established. The relevance of an RES is indicated by information on exposure, fate/kinetics and/or hazard; these three domains are included as separate pillars that contain specific tools. Phase 2 consists of an iterative process of risk characterization, identification of data needs and integrated collection and evaluation of data on the three domains, until sufficient information is obtained to conclude on possible risks in a RES. Only data are generated that are considered to be needed for the purpose of risk assessment. A fourth pillar, risk characterization, is defined and it contains risk assessment tools. This strategy describes a flexible and efficient approach for data collection and risk assessment which is essential to ensure safety of ENMs. Further developments are needed to provide guidance and make the MARINA Risk Assessment Strategy operational. Case studies will be needed to refine the strategy.

Aerobic scope and cardiovascular oxygen transport is not compromised at high temperatures in the toad Rhinella marina.

PubMed

Overgaard, Johannes; Andersen, Jonas L; Findsen, Anders; Pedersen, Pil B M; Hansen, Kasper; Ozolina, Karlina; Wang, Tobias

2012-10-15

Numerous recent studies convincingly correlate the upper thermal tolerance limit of aquatic ectothermic animals to reduced aerobic scope, and ascribe the decline in aerobic scope to failure of the cardiovascular system at high temperatures. In the present study we investigate whether this 'aerobic scope model' applies to an air-breathing and semi-terrestrial vertebrate Rhinella marina (formerly Bufo marinus). To quantify aerobic scope, we measured resting and maximal rate of oxygen consumption at temperatures ranging from 10 to 40°C. To include potential effects of acclimation, three groups of toads were acclimated chronically at 20, 25 and 30°C, respectively. The absolute difference between resting and maximal rate of oxygen consumption increased progressively with temperature and there was no significant decrease in aerobic scope, even at temperature immediately below the lethal limit (41-42°C). Haematological and cardiorespiratory variables were measured at rest and immediately after maximal activity at benign (30°C) and critically high (40°C) temperatures. Within this temperature interval, both resting and active heart rate increased, and there was no indication of respiratory failure, judged from high arterial oxygen saturation, P(O2) and [Hb(O2)]. With the exception of elevated resting metabolic rate for cold-acclimated toads, we found few differences in the thermal responses between acclimation groups with regard to the cardiometabolic parameters. In conclusion, we found no evidence for temperature-induced cardiorespiratory failure in R. marina, indicating that maintenance of aerobic scope and oxygen transport is unrelated to the upper thermal limit of this air-breathing semi-terrestrial vertebrate.

Influence of light, temperature and salinity on dissolved organic carbon exudation rates in Zostera marina L.

EPA Science Inventory

Seagrass carbon budgets provide valuable insight on the minimum requirements needed to maintain this valuable resource. Carbon budgets are a balance between C fixation, storage and loss rates, most of which are well characterized. However, relatively few measurements of dissolv...

Methylarcula marina gen. nov., sp. nov. and Methylarcula terricola sp. nov.: novel aerobic, moderately halophilic, facultatively methylotrophic bacteria from coastal saline environments.

PubMed

Doronina, N V; Trotsenko, Y A; Tourova, T P

2000-09-01

A new genus, Methylarcula, with two new species, Methylarcula marina and Methylarcula terricola, are proposed for strains h1T and h37T of moderately halophilic facultatively methylotrophic bacteria isolated from the coastal saline habitats. These methylobacteria are aerobic, Gram-negative, asporogenous, non-motile, colourless rods that multiply by binary fission. Their cellular fatty acids profiles consist primarily of straight-chain unsaturated (C18:1; 70-80%), saturated (C18:0; 14-16%) and cyclopropane (C19:0; 5-6%) acids. The major ubiquinone is Q-10. The dominant phospholipids are phosphatidylethanolamine and phosphatidylcholine. Both strains could use methylamine, some sugars and organic acids as carbon and energy sources. They grew well under optimal conditions (29-35 degrees C, pH 7.5-8.5, 0.5-1.0 M NaCl) and accumulated intracellularly poly-beta-hydroxybutyrate and the compatible solute ectoine. The ectoine pool was found to increase upon increasing the external NaCl concentration and accounted for 18% of the dry cellular weight. Both strains oxidized methylamine by the N-methylglutamate (N-MG) pathway enzymes (gamma-glutamylmethylamide synthetase/lyase and N-MG synthetase/lyase) to formaldehyde and assimilated it via the icl- serine pathway. The DNA G+C content was 60-4 mol% for Methylarcula marina h1T and 57.1 mol% for Methylarcula terricola h37T. The DNA-DNA hybridization value between strains hl and h37 was 25-30%, although they had a low level of DNA relatedness (5-7%) with the type strains of the serine pathway methylobacteria belonging to the genera Methylobacterium, Aminobacter, Methylorhabdus and Methylopila. A comparative 16S rDNA sequence-based phylogenetic analysis placed the two species of Methylarcula into a separate branch of the alpha-3 subclass of the Proteobacteria. The type strains of the new species are Methylarcula marina h1T (= VKM B-2159T) and Methylarcula terricola h37T (= VKM B-2160T).

Seasonal growth dynamics of the seagrass Zostera caulescens on the eastern coast of Korea

NASA Astrophysics Data System (ADS)

Kim, Jong-Hyeob; Park, Sang Hoon; Kim, Young Kyun; Kim, Seung Hyeon; Park, Jung-Im; Lee, Kun-Seop

2014-12-01

Zostera caulescens is an endemic seagrass species in Northeastern Asia. Estimated distributional area of this species is approximately 1-5 km2 on the coasts of Korea. Because Z. caulescens has a very limited distribution, the growth dynamics of Z. caulescens is little known in the coastal waters of Korea. In the present study, we investigated the growth dynamics of Z. caulescens in relation to coincident measurements of environmental factors, such as underwater irradiance, water temperature, and nutrient availability. The study was conducted on a monotypic meadow of Z. caulescens in Uljin on the eastern coast of Korea from September 2011 to September 2012. Shoot density and biomass of Z. caulescens showed distinct seasonal variations, and exhibited strong correlations with water temperature suggesting that the seasonal growth of this species was regulated by water temperature. Shoot density and biomass rapidly decreased during the high water temperature period in summer, and thus Z. caulescens is considered a cold water adapted species like other temperate seagrass species on coasts of Korea. Biomass of photosynthetic leaf tissues on reproductive shoots was approximately 4 times higher than that on vegetative shoots. The height of reproductive shoots ranged from 1.2 m in February 2012 to 3.2 m in August 2012, whereas the height of vegetative shoots was usually less than 1.0 m. Leaf tissues on reproductive shoots probably received much more light for photosynthesis than those on vegetative shoots. Thus, reproductive shoots may play an important role in total production of Z. caulescens.

Size matters: insights from an allometric approach to evaluate control methods for invasive Australian Rhinella marina.

PubMed

Beaty, Lynne E; Salice, Christopher J

2013-10-01

Invasive species are costly and difficult to control. In order to gain a mechanistic understanding of potential control measures, individual-based models uniquely parameterized to reflect the salient life-history characteristics of invasive species are useful. Using invasive Australian Rhinella marina as a case study, we constructed a cohort- and individual-based population simulation that incorporates growth and body size of terrestrial stages. We used this allometric approach to examine the efficacy of nontraditional control methods (i.e., tadpole alarm chemicals and native meat ants) that may have indirect effects on population dynamics mediated by effects on body size. We compared population estimates resulting from these control methods with traditional hand removal. We also conducted a sensitivity analysis to investigate the effect that model parameters, specifically those associated with growth and body size, had on adult population estimates. Incremental increases in hand removal of adults and juveniles caused nonlinear decreases in adult population estimates, suggesting less return with increased investment in hand-removal efforts. Applying tadpole alarm chemicals or meat ants decreased adult population estimates on the same level as removing 15-25% of adults and juveniles by hand. The combined application of tadpole alarm chemicals and meat ants resulted in approximately 80% decrease in adult abundance, the largest of any applied control method. In further support of the nontraditional control methods, which greatly affected the metamorph stage, our model was most sensitive to changes in metamorph survival, juvenile survival, metamorph growth rate, and adult survival. Our results highlight the use and insights that can be gained from individual-based models that incorporate growth and body size and the potential success that nontraditional control methods could have in controlling established, invasive Rhinella marina populations.

Individual variation and repeatability in urinary corticosterone metabolite responses to capture in the cane toad (Rhinella marina).

PubMed

Narayan, Edward J; Molinia, Frank C; Cockrem, John F; Hero, Jean-Marc

2012-01-15

Urinary corticosterone metabolite enzyme-immunoassay (EIA) can be used for the non-invasive assessment of baseline levels and corticosterone responses in amphibians. In this study, urinary corticosterone responses of wild male cane toads (Rhinella marina) to confinement and repeated handling were measured to quantify individual variation in corticosterone responses for the first time in an amphibian species. Urine samples were collected at 0 h in the wild, hourly from 2 to 8 h after transfer into captivity, and again at 12 and 24 h in captivity. Toads were then held in captivity and subjected to the same sampling protocol on three occasions at 14 days intervals to quantify variation in corticosterone metabolite responses within and between toads. Baseline and individual corticosterone metabolite responses in male cane toads were generally consistent, with high statistical repeatabilities for 0 h (r=0.630), 6 h (r=0.793), 12 h (r=0.652) and 24 h (r=0.721) corticosterone metabolite concentrations, and for the total and corrected integrated corticosterone responses (r=0.567, p=0.033; r=0.728, p=0.014 respectively). Urinary corticosterone responses appear to be a stable, repeatable trait within individuals. Corticosterone responses in amphibians can be more readily measured when urine rather than plasma samples are collected, and the protocol established in the current study can now be applied to the study of variation in corticosterone responses in other amphibians. Copyright © 2011 Elsevier Inc. All rights reserved.

Toxicity effects of an environmental realistic herbicide mixture on the seagrass Zostera noltei.

PubMed

Diepens, Noël J; Buffan-Dubau, Evelyne; Budzinski, Hélène; Kallerhoff, Jean; Merlina, Georges; Silvestre, Jérome; Auby, Isabelle; Nathalie Tapie; Elger, Arnaud

2017-03-01

Worldwide seagrass declines have been observed due to multiple stressors. One of them is the mixture of pesticides used in intensive agriculture and boat antifouling paints in coastal areas. Effects of mixture toxicity are complex and poorly understood. However, consideration of mixture toxicity is more realistic and ecologically relevant for environmental risk assessment (ERA). The first aim of this study was to determine short-term effects of realistic herbicide mixture exposure on physiological endpoints of Zostera noltei. The second aim was to assess the environmental risks of this mixture, by comparing the results to previously published data. Z. noltei was exposed to a mixture of four herbicides: atrazine, diuron, irgarol and S-metolachlor, simulating the composition of typical cocktail of contaminants in the Arcachon bay (Atlantic coast, France). Three stress biomarkers were measured: enzymatic activity of glutathione reductase, effective quantum yield (EQY) and photosynthetic pigment composition after 6, 24 and 96 h. Short term exposure to realistic herbicide mixtures affected EQY, with almost 100% inhibition for the two highest concentrations, and photosynthetic pigments. Effect on pigment composition was detected after 6 h with a no observed effect concentration (NOEC) of 1 μg/L total mixture concentration. The lowest EQY effect concentration at 10% (EC 10 ) (2 μg/L) and pigment composition NOEC with an assessment factor of 10 were above the maximal field concentrations along the French Atlantic coast, suggesting that there are no potential short term adverse effects of this particular mixture on Z. noltei. However, chronic effects on photosynthesis may lead to reduced energy reserves, which could thus lead to effects at whole plant and population level. Understanding the consequences of chemical mixtures could help to improve ERA and enhance management strategies to prevent further declines of seagrass meadows worldwide. Copyright © 2016

Evaluation of Reference Genes for RT-qPCR Studies in the Seagrass Zostera muelleri Exposed to Light Limitation

PubMed Central

Schliep, M.; Pernice, M.; Sinutok, S.; Bryant, C. V.; York, P. H.; Rasheed, M. A.; Ralph, P. J.

2015-01-01

Seagrass meadows are threatened by coastal development and global change. In the face of these pressures, molecular techniques such as reverse transcription quantitative real-time PCR (RT-qPCR) have great potential to improve management of these ecosystems by allowing early detection of chronic stress. In RT-qPCR, the expression levels of target genes are estimated on the basis of reference genes, in order to control for RNA variations. Although determination of suitable reference genes is critical for RT-qPCR studies, reports on the evaluation of reference genes are still absent for the major Australian species Zostera muelleri subsp. capricorni (Z. muelleri). Here, we used three different software (geNorm, NormFinder and Bestkeeper) to evaluate ten widely used reference genes according to their expression stability in Z. muelleri exposed to light limitation. We then combined results from different software and used a consensus rank of four best reference genes to validate regulation in Photosystem I reaction center subunit IV B and Heat Stress Transcription factor A- gene expression in Z. muelleri under light limitation. This study provides the first comprehensive list of reference genes in Z. muelleri and demonstrates RT-qPCR as an effective tool to identify early responses to light limitation in seagrass. PMID:26592440

Detrital shadows: estuarine food web connectivity depends on fluvial influence and consumer feeding mode.

PubMed

Howe, Emily; Simenstad, Charles A; Ogston, Andrea

2017-10-01

We measured the influence of landscape setting on estuarine food web connectivity in five macrotidal Pacific Northwest estuaries across a gradient of freshwater influence. We used stable isotopes (δ 13 C, δ 15 N, δ 34 S) in combination with a Bayesian mixing model to trace primary producer contributions to suspension- and deposit-feeding bivalve consumers (Mytilus trossulus and Macoma nasuta) transplanted into three estuarine vegetation zones: emergent marsh, mudflat, and eelgrass. Eelgrass includes both Japanese eelgrass (Zostera japonica) and native eelgrass (Zostera marina). Fluvial discharge and consumer feeding mode strongly influenced the strength and spatial scale of observed food web linkages, while season played a secondary role. Mussels displayed strong cross-ecosystem connectivity in all estuaries, with decreasing marine influence in the more fluvial estuaries. Mussel diets indicated homogenization of detrital sources within the water column of each estuary. In contrast, the diets of benthic deposit-feeding clams indicated stronger compartmentalization in food web connectivity, especially in the largest river delta where clam diets were trophically disconnected from marsh sources of detritus. This suggests detritus deposition is patchy across space, and less homogenous than the suspended detritus pool. In addition to fluvial setting, other estuary-specific environmental drivers, such as marsh area or particle transport speed, influenced the degree of food web linkages across space and time, often accounting for unexpected patterns in food web connectivity. Transformations of the estuarine landscape that alter river hydrology or availability of detritus sources can thus potentially disrupt natural food web connectivity at the landscape scale, especially for sedentary organisms, which cannot track their food sources through space. © 2017 by the Ecological Society of America.

Population ecology and shell chemistry of a phytal ostracode species (Loxoconcha matagordensis) in the Chesapeake Bay watershed

USGS Publications Warehouse

Vann, C.D.; Cronin, T. M.; Dwyer, Gary S.

2004-01-01

Population ecology and shell chemistry were studied in the phytal ostracode Loxoconcha matagordensis (Swain 1955) collected from Zostera marina seagrass beds in the Chesapeake Bay to provide seasonal constraints on shell secretion time for paleothermometry. Population density and age structure were defined by two main breeding cycles that occurred between 01 to 15 June and 02 to 16 August 2001. The time interval between breeding cycles was ???2 months and total juvenile standing crop increased almost three-fold between the first and second breeding cycles. Dark brown over-wintered adults comprised the majority of the population between March and April 2001, while newly secreted translucent adults were predominant between June and September. Seasonal shell Mg/Ca and Sr/Ca ratios were positively correlated with water temperature at both sites, with the strongest correlations occurring between June and September from newly secreted shells at Dameron Marsh. Old, dark brown shells contained 10% to 23% and 1% to 6% less Mg/Ca and Sr/Ca, respectively, than new shells. Because a fossil assemblage of L. matagordensis will contain ???30% old shells (dark-brown), these results suggest that fossil Mg/Ca ratios yield an integrated late spring to summer temperature signal. Shell Mg/Ca and Sr/Ca ratios of specimens of L. matagordensis collected from living Zostera were positively correlated, suggesting that temperature may influence both elemental ratios. Mg/Ca and Sr/Ca ratios of fossil shells of the related species Loxoconcha sp. A obtained from four sediment cores were also studied and exhibited a weaker correlation between the two elemental ratios. ?? 2004 Elsevier B.V. All rights reserved.

Effects of Bioadvection by Arenicola marina on Microphytobenthos in Permeable Sediments.

PubMed

Chennu, Arjun; Volkenborn, Nils; de Beer, Dirk; Wethey, David S; Woodin, Sarah A; Polerecky, Lubos

2015-01-01

We used hyperspectral imaging to study short-term effects of bioturbation by lugworms (Arenicola marina) on the surficial biomass of microphytobenthos (MPB) in permeable marine sediments. Within days to weeks after the addition of a lugworm to a homogenized and recomposed sediment, the average surficial MPB biomass and its spatial heterogeneity were, respectively, 150-250% and 280% higher than in sediments without lugworms. The surficial sediment area impacted by a single medium-sized lugworm (~4 g wet weight) over this time-scale was at least 340 cm2. While sediment reworking was the primary cause of the increased spatial heterogeneity, experiments with lugworm-mimics together with modeling showed that bioadvective porewater transport from depth to the sediment surface, as induced by the lugworm ventilating its burrow, was the main cause of the increased surficial MPB biomass. Although direct measurements of nutrient fluxes are lacking, our present data show that enhanced advective supply of nutrients from deeper sediment layers induced by faunal ventilation is an important mechanism that fuels high primary productivity at the surface of permeable sediments even though these systems are generally characterized by low standing stocks of nutrients and organic material.

Effects of Bioadvection by Arenicola marina on Microphytobenthos in Permeable Sediments

PubMed Central

Chennu, Arjun; Volkenborn, Nils; de Beer, Dirk; Wethey, David S.; Woodin, Sarah A.; Polerecky, Lubos

2015-01-01

We used hyperspectral imaging to study short-term effects of bioturbation by lugworms (Arenicola marina) on the surficial biomass of microphytobenthos (MPB) in permeable marine sediments. Within days to weeks after the addition of a lugworm to a homogenized and recomposed sediment, the average surficial MPB biomass and its spatial heterogeneity were, respectively, 150-250% and 280% higher than in sediments without lugworms. The surficial sediment area impacted by a single medium-sized lugworm (~4 g wet weight) over this time-scale was at least 340 cm2. While sediment reworking was the primary cause of the increased spatial heterogeneity, experiments with lugworm-mimics together with modeling showed that bioadvective porewater transport from depth to the sediment surface, as induced by the lugworm ventilating its burrow, was the main cause of the increased surficial MPB biomass. Although direct measurements of nutrient fluxes are lacking, our present data show that enhanced advective supply of nutrients from deeper sediment layers induced by faunal ventilation is an important mechanism that fuels high primary productivity at the surface of permeable sediments even though these systems are generally characterized by low standing stocks of nutrients and organic material. PMID:26230398

Linking Ecological, Environmental and Biogeochemical Data with Multi'omics Analysis

NASA Astrophysics Data System (ADS)

Hasler-Sheetal, H.; Castorani, M. C.; Fragner, L.; Zeng, Y.; Holmer, M.; Glud, R. N.; Weckwerth, W.; Canfield, D. E.

2016-02-01

The integrated analysis of multi'omics and environmental data provides a holistic understanding of biological processes and has been proven to be challenging. Here we present our research concept for conducting multi-omics experiments and linking them to environmental data. Hypoxia, reduced light availability and species interaction - all amplified by global warming - cause a global decline of seagrasses. Metabolic mechanisms for coping with these global threats are largely unknown and multi'omics approaches can be an important approach for generating this insight. We applied GC, LC-qTOF-MS and bioinformatics to investigate the effects of environmental pressure on metabolites present in seagrasses. In a first experiment we assessed the metabolomics response of the seagrass Zostera marina towards anoxia and showed that photosynthetically derived oxygen could satisfy the oxygen demand in the leaves. But accumulation of fermentation products in the roots showed that the rhizosphere was under anoxic stress. In contrast nocturnal anoxia caused a biphasic shift in the metabolome of roots and leaves. This nocturnal reprogramming of the metabolome under anoxia indicates a mitigation mechanism to avoid the toxic effects. A pathway enrichment analysis proposes the alanine shunt, the GABA shunt and the 2-oxoglutarate shunt as such mitigation mechanisms that alleviate pyruvate levels and lead to carbon and nitrogen storage during anoxia. In a second experiment, varying light exposure and species interaction of Z. marina with the blue mussel Mytilus edulis - a co-occurring species in seagrass systems - resulted in treatment specific metabolic fingerprints in seagrass. Light modified the metabolic fingerprint expressed in Z. marina to the presence of mussels, indicating varying physiological responses to mussels in normal and low light regimes. Multivariate data-analysis indicated light exposure as main driver (45%) and mussel presence as minor driver (13%) for the metabolic

Expressed sequence tags from heat-shocked seagrass Zostera noltii (Hornemann) from its southern distribution range.

PubMed

Massa, Sónia I; Pearson, Gareth A; Aires, Tânia; Kube, Michael; Olsen, Jeanine L; Reinhardt, Richard; Serrão, Ester A; Arnaud-Haond, Sophie

2011-09-01

Predicted global climate change threatens the distributional ranges of species worldwide. We identified genes expressed in the intertidal seagrass Zostera noltii during recovery from a simulated low tide heat-shock exposure. Five Expressed Sequence Tag (EST) libraries were compared, corresponding to four recovery times following sub-lethal temperature stress, and a non-stressed control. We sequenced and analyzed 7009 sequence reads from 30min, 2h, 4h and 24h after the beginning of the heat-shock (AHS), and 1585 from the control library, for a total of 8594 sequence reads. Among 51 Tentative UniGenes (TUGs) exhibiting significantly different expression between libraries, 19 (37.3%) were identified as 'molecular chaperones' and were over-expressed following heat-shock, while 12 (23.5%) were 'photosynthesis TUGs' generally under-expressed in heat-shocked plants. A time course analysis of expression showed a rapid increase in expression of the molecular chaperone class, most of which were heat-shock proteins; which increased from 2 sequence reads in the control library to almost 230 in the 30min AHS library, followed by a slow decrease during further recovery. In contrast, 'photosynthesis TUGs' were under-expressed 30min AHS compared with the control library, and declined progressively with recovery time in the stress libraries, with a total of 29 sequence reads 24h AHS, compared with 125 in the control. A total of 4734 TUGs were screened for EST-Single Sequence Repeats (EST-SSRs) and 86 microsatellites were identified. Copyright © 2011 Elsevier B.V. All rights reserved.

Sinkhole Geohazard In Deformed Sulphates at Marina di Lesina (Gargano Promontory, Italy): a Combination of Anthropogenic, Lithologic, and Structural Causes

NASA Astrophysics Data System (ADS)

Gabbianelli, G.; Antonellini, M.; Mancini, F.; Stecchi, F.; Castellarin, A.

2009-04-01

Sinkhole development and collapse of underground caves within a gypsum substrate is focused in proximity to the beach resort of Marina di Lesina on the Adriatic coast of Southern Italy. This situation constitutes a serious geohazard for the local community and a threat to the development of the tourist activity. Fast sinkhole development has been reported in the last two decades both in terms of newly formed cavities and of widening of already existing ones. Morphologically, the apparent sinkholes are small (from a few meters to a few tens of meters) and restricted to the area of the harbour canal. The substratum of the area consists of evaporite and carbonate platfom sediments of the Apulian margin, Triassic to Cretaceous in age, above which there is a thin layer (2 to 4 m) of Quaternary fine to medium sand deposits. Sheared marls, sub-volcanic igneous rocks, and bituminous limestone connected to a fault scarp, as well as small salt diapirs have been observed in proximity to the city. Below the urban area of Marina di Lesina, the platform sediments consist of fractured, sheared, and karstified sulfates (Burano Formation). Given solubility larger than that of carbonate rock, sulfates is a focus for the dissolution process. From a structural point of view, the Marina di Lesina area is probably in a push-up step between two secondary segments of East-West trending left lateral strike-slip faults with the same trend of the Mattinata fault system. The presence of a push-up structure is confirmed by the existing geological maps, the morphological, and the altimetry data available for the area that point out the presence of arcuate relief structures next to the Pietre Nere (Black Rocks) Head. These high relief areas are probable NW-SE oriented high angle reverse faults in the compressional quadrant of the southernmost strike-slip fault segment. The area within a push-up step is undergoing an intense compressive stress that results in strong pressure solution phenomena

USING STABLE ISOTOPES AND MECHANISTIC MODELS TO EXAMINE CARBON RESOURCE PARTITIONING IN THALASSIA TESTUDINUM AND ZOSTERA MARINA

EPA Science Inventory

Natural and anthropogenic stress negatively impact seagrass production and ecosystem function. Our goal is to better understand seagrass response to reduced light, nutrient and organic loading at a variety of ecological scales (individual to landscape) in order to help develop p...

Reproductive toxicity of the water accommodated fraction (WAF) of crude oil in the polychaetes Arenicola marina (L.) and Nereis virens (Sars).

PubMed

Lewis, Ceri; Pook, Chris; Galloway, Tamara

2008-10-20

Accidental pollution incidents are common in the marine environment and are often caused by oil-related activities. Here the potential of such an incident to disrupt reproduction in two polychaete species is investigated, using an environmentally relevant preparation of weathered Forties crude oil, i.e. the water accommodated fraction (WAF). Oocytes were collected and exposed to three concentrations of WAF for 1h prior to the addition of sperm, so that fertilization took place under exposure conditions. Fertilization success was significantly reduced in both species by an exposure to WAF concentrations equivalent to 0.38 mgL(-1) PAHs, to just 26.8% in Arenicola marina compared to 76% in Nereis virens. The effects of WAF exposure on fertilization were greatly enhanced at lower sperm concentrations in N. virens, with a complete lack of fertilization reactions observed at sperm concentrations of 10(3)sperm per mL. We therefore suggest a mechanism of toxicity related to sperm swimming behaviour, resulting in reduced sperm:egg collision rates. WAF was found to reduce post-fertilization development rates and have teratogenic effects on early embryonic stages in both species, which exhibited abnormal cleavage patterns and high levels of fluctuating asymmetry. These results illustrate how the presence of crude oil in its soluble form in seawater at the time of a spawning event for either A. marina or N. virens could impact on fertilization success with implications for the fertilization ecology of these free spawning marine invertebrates.

Genetic diversity enhances the resistance of a seagrass ecosystem to disturbance.

PubMed

Hughes, A Randall; Stachowicz, John J

2004-06-15

Motivated by recent global reductions in biodiversity, empirical and theoretical research suggests that more species-rich systems exhibit enhanced productivity, nutrient cycling, or resistance to disturbance or invasion relative to systems with fewer species. In contrast, few data are available to assess the potential ecosystem-level importance of genetic diversity within species known to play a major functional role. Using a manipulative field experiment, we show that increasing genotypic diversity in a habitat-forming species (the seagrass Zostera marina) enhances community resistance to disturbance by grazing geese. The time required for recovery to near predisturbance densities also decreases with increasing eelgrass genotypic diversity. However, there is no effect of diversity on resilience, measured as the rate of shoot recovery after the disturbance, suggesting that more rapid recovery in diverse plots is due solely to differences in disturbance resistance. Genotypic diversity did not affect ecosystem processes in the absence of disturbance. Thus, our results suggest that genetic diversity, like species diversity, may be most important for enhancing the consistency and reliability of ecosystems by providing biological insurance against environmental change.

Loss of eelgrass in Casco Bay, Maine, linked to Green Crab disturbance

USGS Publications Warehouse

Neckles, Hilary A.

2015-01-01

Over half of the Zostera marina (Eelgrass) cover disappeared from Casco Bay, ME, largely between 2012 and 2013. Eelgrass decline coincided with a population explosion of the invasive crab Carcinus maenas (European Green Crab). Green Crabs have been found to damage Eelgrass in Atlantic Canada through foraging activity, but destruction of established beds had not been documented in Maine. My objective was to determine whether loss of Eelgrass from Casco Bay was related to Green Crab disturbance. In September 2013, I transplanted Eelgrass shoots inside and outside of replicate Green Crab exclosures in a formerly vegetated area of upper Casco Bay. Following 26 d, mean survival of Eelgrass inside the exclosures was 82% and outside the exclosures was 24%. The mean plastochrone interval (time between formation of 2 successive leaves) of undamaged shoots was the same inside and outside the exclosures, and was comparable to published values from healthy Eelgrass beds in New England. Results implicate Green Crab bioturbation as a leading cause of Eelgrass loss from this system.

Distribution and stability of eelgrass beds at Izembek Lagoon, Alaska

USGS Publications Warehouse

Ward, David H.; Markon, Carl J.; Douglas, David C.

1997-01-01

Spatial change in eelgrass meadows, Zostera marina L., was assessed between 1978 and 1987 and between 1987 and 1995 at Izembek Lagoon, Alaska. Change in total extent was evaluated through a map to map comparison of data interpreted from a 1978 Landsat multi-spectral scanner image and 1987 black and white aerial photographs. A ground survey in 1995 was used to assess spatial change from 1987. Eelgrass beds were the predominant vegetation type in the lagoon, comprising 44-47% (15000-16000 ha) of the total area in 1978 and 1987. Izembek Lagoon contains the largest bed of seagrass along the Pacific Coast of North America and largest known single stand of eelgrass in the world. There was a high degree of overlap in the spatial distribution of eelgrass among years of change detection. The overall net change was a 6% gain between, 1978 and 1987 and a <1% gain between 1987 and 1995. The lack of significant change in eelgrass cover suggests that eelgrass meadows in Izembek Lagoon have been stable during the 17-year period of our study.

Remote sensing of submerged aquatic vegetation in lower Chesapeake Bay - A comparison of Landsat MSS to TM imagery

NASA Technical Reports Server (NTRS)

Ackleson, S. G.; Klemas, V.

1987-01-01

Landsat MSS and TM imagery, obtained simultaneously over Guinea Marsh, VA, as analyzed and compares for its ability to detect submerged aquatic vegetation (SAV). An unsupervised clustering algorithm was applied to each image, where the input classification parameters are defined as functions of apparent sensor noise. Class confidence and accuracy were computed for all water areas by comparing the classified images, pixel-by-pixel, to rasterized SAV distributions derived from color aerial photography. To illustrate the effect of water depth on classification error, areas of depth greater than 1.9 m were masked, and class confidence and accuracy recalculated. A single-scattering radiative-transfer model is used to illustrate how percent canopy cover and water depth affect the volume reflectance from a water column containing SAV. For a submerged canopy that is morphologically and optically similar to Zostera marina inhabiting Lower Chesapeake Bay, dense canopies may be isolated by masking optically deep water. For less dense canopies, the effect of increasing water depth is to increase the apparent percent crown cover, which may result in classification error.

The Complex Transcriptional Response of Acaryochloris marina to Different Oxygen Levels

PubMed Central

Hernández-Prieto, Miguel A.; Lin, Yuankui; Chen, Min

2016-01-01

Ancient oxygenic photosynthetic prokaryotes produced oxygen as a waste product, but existed for a long time under an oxygen-free (anoxic) atmosphere, before an oxic atmosphere emerged. The change in oxygen levels in the atmosphere influenced the chemistry and structure of many enzymes that contained prosthetic groups that were inactivated by oxygen. In the genome of Acaryochloris marina, multiple gene copies exist for proteins that are normally encoded by a single gene copy in other cyanobacteria. Using high throughput RNA sequencing to profile transcriptome responses from cells grown under microoxic and hyperoxic conditions, we detected 8446 transcripts out of the 8462 annotated genes in the Cyanobase database. Two-thirds of the 50 most abundant transcripts are key proteins in photosynthesis. Microoxic conditions negatively affected the levels of expression of genes encoding photosynthetic complexes, with the exception of some subunits. In addition to the known regulation of the multiple copies of psbA, we detected a similar transcriptional pattern for psbJ and psbU, which might play a key role in the altered components of photosystem II. Furthermore, regulation of genes encoding proteins important for reactive oxygen species-scavenging is discussed at genome level, including, for the first time, specific small RNAs having possible regulatory roles under varying oxygen levels. PMID:27974439

Effects of Detrital Subsidies on Soft-Sediment Ecosystem Function Are Transient and Source-Dependent.

PubMed

Gladstone-Gallagher, Rebecca V; Lohrer, Andrew M; Lundquist, Carolyn J; Pilditch, Conrad A

2016-01-01

Detrital subsidies from marine macrophytes are prevalent in temperate estuaries, and their role in structuring benthic macrofaunal communities is well documented, but the resulting impact on ecosystem function is not understood. We conducted a field experiment to test the effects of detrital decay on soft-sediment primary production, community metabolism and nutrient regeneration (measures of ecosystem function). Twenty four (2 m2) plots were established on an intertidal sandflat, to which we added 0 or 220 g DW m-2 of detritus from either mangroves (Avicennia marina), seagrass (Zostera muelleri), or kelp (Ecklonia radiata) (n = 6 plots per treatment). Then, after 4, 17 and 46 d we measured ecosystem function, macrofaunal community structure and sediment properties. We hypothesized that (1) detrital decay would stimulate benthic primary production either by supplying nutrients to the benthic macrophytes, or by altering the macrofaunal community; and (2) ecosystem responses would depend on the stage and rate of macrophyte decay (a function of source). Avicennia detritus decayed the slowest with a half-life (t50) of 46 d, while Zostera and Ecklonia had t50 values of 28 and 2.6 d, respectively. However, ecosystem responses were not related to these differences. Instead, we found transient effects (up to 17 d) of Avicennia and Ecklonia detritus on benthic primary production, where initially (4 d) these detrital sources suppressed primary production, but after 17 d, primary production was stimulated in Avicennia plots relative to controls. Other ecosystem function response variables and the macrofaunal community composition were not altered by the addition of detritus, but did vary with time. By sampling ecosystem function temporally, we were able to capture the in situ transient effects of detrital subsidies on important benthic ecosystem functions.

Ecology of the Ostracode Loxoconcha in Chesapeake Bay: Application to Shell Chemistry Calibration

NASA Astrophysics Data System (ADS)

Vann, C. D.; Cronin, T. M.; Dwyer, G. S.

2001-12-01

The successful application of magnesium/calcium ratios (Mg/Ca) of ostracode shells to paleothermometry depends on understanding both the factors controlling the uptake of Mg into the ostracode calcitic shell and the species' seasonal ecology, which determines the time of year when adult molting occurs. Loxoconcha, a cosmopolitan shallow-water ostracode genus that evolved in the Paleogene, includes more than 500 extant species, many inhabiting temperate regions, making it a potentially valuable tool in Cenozoic paleothermometry. We studied the population ecology of Loxoconcha matagordensis, an epiphytal species common in bays and estuaries along the Atlantic and Gulf Coasts of North America, for application to Holocene paleoclimatology in temperate coastal regions. L. matagordensis populations collected from Zostera marina beds in Chesapeake Bay (N 37° 47'4.3", W 76° 17'44.4"; N 37° 47'4.5", W 76° 17'31.0") show that its population dynamics and Zostera height appear to be regulated primarily by seasonal oscillations in water temperature. As water temperature increased from 14.8° to 24.6° C between April and July 2001, a spring breeding season occurred shifting the age structure of the Loxoconcha population from an entirely adult population (individuals that wintered over) to a predominately juvenile population comprised of all eight growth (molt) stages. Most new adults secreted their shells during May and June, although in some years, a second breeding season may occur in late August/September. Other temperate species of this genus also appear to have spring/early summer adult shell growth. Our results suggest that the Mg/Ca ratios from Holocene adult shells of Loxoconcha obtained from sediment cores provide a record of late spring/early summer water temperature variability linked to decadal and centennial climate processes.

Wave Velocity Attenuation and Sediment Retention among Different Vegetation Types in a Pacific Northwest Estuary

NASA Astrophysics Data System (ADS)

Lemein, T.; Cox, D. T.; Albert, D.; Blackmar, P.

2012-12-01

Feedbacks between vegetation, wave climate, and sedimentation create stable ecosystem states within estuaries that provide ecosystem services such as wildlife habitat, erosion control, and pollution filtration. Flume and field studies conducted with cordgrass (Spartina spp.) and sea grasses (Zostera spp., Halodule spp.) have demonstrated that the presence of vegetation reduces wave energy and increases sediment retention. Since the spatial distribution of plant species and the presence of unique plant species differ between estuaries, there is a need to understand how individual plant species, or groups of species with similar morphology, influence wave characteristics and sedimentation. Within Tillamook Bay, Oregon, three species of emergent vascular vegetation species (Carex lyngbyei, Eleocharis sp., Schoenoplectus pungens) and one species of submergent vascular vegetation species (Zostera marina) are present in the high wave energy portion of the estuary at the border of open water and the start of vegetation. These species represent three distinct growth forms (emergent reeds, emergent grasses, submergent grasses) and occur at varying densities relative to each other, as well as within the estuary. Using paired acoustic Doppler velocimeters (ADVs), we quantify the relative attenuation of wave velocity between vegetation types and densities within the estuary and compare these results with published attenuation rates from flume and field studies in different environments. The effect of decreased wave velocity on sediment retention is measured using permanent sediment markers within and outside of vegetation stands and paired with ADV data. Sediment retention is predicted to vary seasonally with seasonal vegetation composition changes and remain constant in unvegetated areas. From this experiment we expect to identify like groups of plant species whose attenuation characteristics are the same, allowing for models of wave-vegetation-sediment interaction to be

Francisella marina sp. nov., etiologic agent of systemic disease in cultured spotted rose snapper (Lutjanus guttatus) in Central America.

PubMed

Soto, Esteban; Griffin, Matt J; Morales, Juan Alberto; Barquero Calvo, Elías; de Alexandre Sebastião, Fernanda; Lopez Porras, Adrián; Víquez-Rodríguez, Xindy; Reichley, Stephen R; Rosser, Thomas G; Ware, Cynthia; Byrne, Barbara A; García, Julio C; LaFrentz, Benjamin R; Camus, Alvin C

2018-06-18

Historically, piscine francisellosis in various warm, temperate and coldwater fish hosts has been attributed to Francisella noatunensis From 2015-2016, an undescribed Francisella sp. was recovered during mortality events in cultured spotted rose snapper ( Lutjanus guttatus ) off the Pacific coast of Central America. Despite high mortality and emaciation, limited gross findings were observed in affected fish. Histological examination revealed multifocal granulomatous lesions, with the presence of numerous small, pleomorphic coccobacilli, predominantly in the peritoneum, spleen, kidneys, liver, pancreas, heart, and intestine. Sequencing of an ∼1400 bp fragment of the 16S rRNA gene demonstrated these isolates to be most similar (99.9% identity) to Francisella sp. isolate TX077308 cultured from sea water in the Gulf of Mexico, while sharing <99% similarity to other Fransicella spp. Biochemical analysis, multi-locus sequence comparisons of select housekeeping-genes, repetitive extragenic palindromic PCR fingerprinting, matrix-assisted laser-desorption ionization-time of flight mass spectrometry, and fatty acid methyl esters analysis revealed marked differences between these isolates and other described members of the genus. Koch's postulates were fulfilled by experimental intracoelomic injection and immersion trials using Nile ( Oreochromis niloticus ) and blue tilapia ( O. aureus ). Based on observed phenotypic and genotypic differences from recognized Francisella spp., the name Francisella marina sp. nov. (NRRL # B-65518) is proposed to accommodate these novel strains. Importance Finfish aquaculture is the fastest growing global food production sector. Infectious disease, particularly emergent pathogens, pose a significant threat to established and nascent aquaculture industries worldwide. Herein, we characterize a novel pathogen isolated from mortality events in cultured spotted rose snapper in Central America. The bacteria recovered from these outbreaks were

Sulphate reduction and nitrogen fixation rates associated with roots, rhizomes and sediments from Zostera noltii and Spartina maritima meadows.

PubMed

Nielsen, L B; Finster, K; Welsh, D T; Donelly, A; Herbert, R A; de Wit, R; Lomstein, B A

2001-01-01

Sulphate reduction rates (SRR) and nitrogen fixation rates (NFR) associated with isolated roots, rhizomes and sediment from the rhizosphere of the marine macrophytes Zostera noltii and Spartina maritima, and the presence and distribution of Bacteria on the roots and rhizomes, were investigated. Between 1% and 3% of the surface area of the roots and rhizomes of both macrophytes were colonized by Bacteria. Bacteria on the surfaces of S. maritima roots and rhizomes were evenly distributed, while the distribution of Bacteria on Z. noltii roots and rhizomes was patchy. Root- and rhizome-associated SRR and NFR were always higher than rates in the bulk sediment. In particular, nitrogen fixation associated with the roots and rhizomes was 41-650-fold higher than in the bulk sediment. Despite the fact that sulphate reduction was elevated on roots and rhizomes compared with bulk sediment, the contribution of plant-associated sulphate reduction to overall sulphate reduction was small (< or =11%). In contrast, nitrogen fixation associated with the roots and rhizomes accounted for 31% and 91% of the nitrogen fixed in the rhizosphere of Z. noltii and S. maritima respectively. In addition, plant-associated nitrogen fixation could supply 37-1,613% of the nitrogen needed by the sulphate-reducing community. Sucrose stimulated nitrogen fixation and sulphate reduction significantly in the root and rhizome compartments of both macrophytes, but not in the bulk sediment.

Urinary corticosterone responses to capture and toe-clipping in the cane toad (Rhinella marina) indicate that toe-clipping is a stressor for amphibians.

PubMed

Narayan, Edward J; Molinia, Frank C; Kindermann, Christina; Cockrem, John F; Hero, Jean-Marc

2011-11-01

Toe-clipping, the removal of one or more toes, is a common method used to individually mark free-living animals. Whilst this method is widely used in studies of amphibians, the appropriateness of the method, and its potential detrimental effects have been the subject of debate. Here, we provide for the first time, evidence that toe-clipping is a stressor in a wild amphibian. We measured urinary corticosterone responses of male cane toads (Rhinella marina) to capture and handling only, and to toe-clipping under field conditions. Urinary testosterone concentrations and white blood cell proportions were also measured. Urinary corticosterone metabolite concentrations increased 6h after capture and handling only and remained high for 24h; corticosterone returned to baseline levels after 48 h and remained low at 72 h post capture and handling. Corticosterone concentrations in toads subjected to toe-clipping increased at 6h to significantly higher concentrations than after capture and handling only, then decreased more slowly than after capture and handling, and were still elevated (approximately double basal level) 72 h after toe-clipping. Testosterone did not change significantly after capture and handling only, whereas after toe-clipping testosterone decreased at 6h and remained low at 72 h. There were weak short-term effects of toe-clipping compared with capture and handling only on white blood cell proportions. We have clearly shown that toe-clipping is a distinctly stronger stressor than capture and handling alone. This indicates that there is an ethical cost of toe-clipping, and this should be considered when planning studies of amphibians. Copyright © 2011 Elsevier Inc. All rights reserved.

The Complex Transcriptional Response of Acaryochloris marina to Different Oxygen Levels.

PubMed

Hernández-Prieto, Miguel A; Lin, Yuankui; Chen, Min

2017-02-09

Ancient oxygenic photosynthetic prokaryotes produced oxygen as a waste product, but existed for a long time under an oxygen-free (anoxic) atmosphere, before an oxic atmosphere emerged. The change in oxygen levels in the atmosphere influenced the chemistry and structure of many enzymes that contained prosthetic groups that were inactivated by oxygen. In the genome of Acaryochloris marina , multiple gene copies exist for proteins that are normally encoded by a single gene copy in other cyanobacteria. Using high throughput RNA sequencing to profile transcriptome responses from cells grown under microoxic and hyperoxic conditions, we detected 8446 transcripts out of the 8462 annotated genes in the Cyanobase database. Two-thirds of the 50 most abundant transcripts are key proteins in photosynthesis. Microoxic conditions negatively affected the levels of expression of genes encoding photosynthetic complexes, with the exception of some subunits. In addition to the known regulation of the multiple copies of psbA , we detected a similar transcriptional pattern for psbJ and psbU , which might play a key role in the altered components of photosystem II. Furthermore, regulation of genes encoding proteins important for reactive oxygen species-scavenging is discussed at genome level, including, for the first time, specific small RNAs having possible regulatory roles under varying oxygen levels. Copyright © 2017 Hernandez-Prieto et al.

The crystal structure of the C45S mutant of annelid Arenicola marina peroxiredoxin 6 supports its assignment to the mechanistically typical 2-Cys subfamily without any formation of toroid-shaped decamers

PubMed Central

Smeets, Aude; Loumaye, Eléonore; Clippe, André; Rees, Jean-François; Knoops, Bernard; Declercq, Jean-Paul

2008-01-01

The peroxiredoxins (PRDXs) define a superfamily of thiol-dependent peroxidases able to reduce hydrogen peroxide, alkyl hydroperoxides, and peroxynitrite. Besides their cytoprotective antioxidant function, PRDXs have been implicated in redox signaling and chaperone activity, the latter depending on the formation of decameric high-molecular-weight structures. PRDXs have been mechanistically divided into three major subfamilies, namely typical 2-Cys, atypical 2-Cys, and 1-Cys PRDXs, based on the number and position of cysteines involved in the catalysis. We report the structure of the C45S mutant of annelid worm Arenicola marina PRDX6 in three different crystal forms determined at 1.6, 2.0, and 2.4 Å resolution. Although A. marina PRDX6 was cloned during the search of annelid homologs of mammalian 1-Cys PRDX6s, the crystal structures support its assignment to the mechanistically typical 2-Cys PRDX subfamily. The protein is composed of two distinct domains: a C-terminal domain and an N-terminal domain exhibiting a thioredoxin fold. The subunits are associated in dimers compatible with the formation of intersubunit disulfide bonds between the peroxidatic and the resolving cysteine residues in the wild-type enzyme. The packing of two crystal forms is very similar, with pairs of dimers associated as tetramers. The toroid-shaped decamers formed by dimer association and observed in most typical 2-Cys PRDXs is not present. Thus, A. marina PRDX6 presents structural features of typical 2-Cys PRDXs without any formation of toroid-shaped decamers, suggesting that it should function more like a cytoprotective antioxidant enzyme or a modulator of peroxide-dependent cell signaling rather than a molecular chaperone. PMID:18359859

Kocuria marina BS-15 a biosurfactant producing halophilic bacteria isolated from solar salt works in India

PubMed Central

Sarafin, Yesurethinam; Donio, Mariathasan Birdilla Selva; Velmurugan, Subramanian; Michaelbabu, Mariavincent; Citarasu, Thavasimuthu

2014-01-01

Biosurfactant screening was made among the eight halophilic bacterial genera isolated from Kovalam solar salt works in Kanyakumari of India. After initial screening, Kocuria sp. (Km), Kurthia sp. (Ku) and Halococcus sp. (Hc) were found to have positive biosurfactant activity. Biosurfactant derived from Kocuria sp. emulsified more than 50% of the crude oil, coconut oil, sunflower oil, olive oil and kerosene when compared to the other strains. Further, Kocuria marina BS-15 derived biosurfactant was purified and characterized by TLC, FTIR and GC–MS analysis. The TLC analysis revealed that, the purified biosurfactants belong to the lipopeptide group. The IR spectrum results revealed that functional groups are R2C 000000000000 000000000000 000000000000 111111111111 000000000000 111111111111 000000000000 000000000000 000000000000 NN, alkenes and N–H. The GC–MS analysis confirmed the compound as Nonanoic acid and Cyclopropane with the retention time of 12.78 and 24.65, respectively. PMID:25473358

Minimum light duration needed to maintain winter and summer adapted eelgrass (Zostera marina) as determined by mesocosm experiments

EPA Science Inventory

The intensity and duration of photosynthetically active radiation (PAR) is one of the primary factors determining seagrass survival. A commonly used metric to evaluate if there is sufficient PAR is Hsat, which is the number of hours per day in which photosynthetic pigments are s...

Characterization of the Skin Microbiota of the Cane Toad Rhinella cf. marina in Puerto Rico and Costa Rica

PubMed Central

Abarca, Juan G.; Zuniga, Ibrahim; Ortiz-Morales, Gilmary; Lugo, Armando; Viquez-Cervilla, Mariel; Rodriguez-Hernandez, Natalia; Vázquez-Sánchez, Frances; Murillo-Cruz, Catalina; Torres-Rivera, Ernesto A.; Pinto-Tomás, Adrián A.; Godoy-Vitorino, Filipa

2018-01-01

Rhinella marina is a toad native to South America that has been introduced in the Antilles, likely carrying high loads of microorganisms, potentially impacting local community diversity. The amphibian skin is involved in pathogen defense and its microbiota has been relatively well studied, however, research focusing on the cane toad microbiota is lacking. We hypothesize that the skin microbial communities will differ between toads inhabiting different geographical regions in Central America and the Caribbean. To test our hypothesis, we compared the microbiota of three populations of R. cf. marina toads, two from Costa Rican (native) and one Puerto Rican (exotic) locations. In Costa Rica, we collected 11 toads, 7 in Sarapiquí and 4 from Turrialba while in Puerto Rico, 10 animals were collected in Santa Ana. Separate swab samples were collected from the dorsal and ventral sites resulting in 42 samples. We found significant differences in the structure of the microbial communities between Puerto Rico and Costa Rica. We detected as much as 35 different phyla; however, communities were dominated by Proteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria. Alpha diversity and richness were significantly higher in toads from Puerto Rico and betadiversity revealed significant differences between the microbiota samples from the two countries. At the genus level, we found in Santa Ana, Puerto Rico, a high dominance of Kokuria, Niabella, and Rhodobacteraceae, while in Costa Rica we found Halomonas and Pseudomonas in Sarapiquí, and Acinetobacter and Citrobacter in Turrialba. This is the first report of Niabella associated with the amphibian skin. The core microbiome represented 128 Operational Taxonomic Units (OTUs) mainly from five genera shared among all samples, which may represent the symbiotic Rhinella’s skin. These results provide insights into the habitat-induced microbial changes facing this amphibian species. The differences in the microbial diversity in

Characterization of the Skin Microbiota of the Cane Toad Rhinella cf. marina in Puerto Rico and Costa Rica.

PubMed

Abarca, Juan G; Zuniga, Ibrahim; Ortiz-Morales, Gilmary; Lugo, Armando; Viquez-Cervilla, Mariel; Rodriguez-Hernandez, Natalia; Vázquez-Sánchez, Frances; Murillo-Cruz, Catalina; Torres-Rivera, Ernesto A; Pinto-Tomás, Adrián A; Godoy-Vitorino, Filipa

2017-01-01

Rhinella marina is a toad native to South America that has been introduced in the Antilles, likely carrying high loads of microorganisms, potentially impacting local community diversity. The amphibian skin is involved in pathogen defense and its microbiota has been relatively well studied, however, research focusing on the cane toad microbiota is lacking. We hypothesize that the skin microbial communities will differ between toads inhabiting different geographical regions in Central America and the Caribbean. To test our hypothesis, we compared the microbiota of three populations of R. cf. marina toads, two from Costa Rican (native) and one Puerto Rican (exotic) locations. In Costa Rica, we collected 11 toads, 7 in Sarapiquí and 4 from Turrialba while in Puerto Rico, 10 animals were collected in Santa Ana. Separate swab samples were collected from the dorsal and ventral sites resulting in 42 samples. We found significant differences in the structure of the microbial communities between Puerto Rico and Costa Rica. We detected as much as 35 different phyla; however, communities were dominated by Proteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria. Alpha diversity and richness were significantly higher in toads from Puerto Rico and betadiversity revealed significant differences between the microbiota samples from the two countries. At the genus level, we found in Santa Ana, Puerto Rico, a high dominance of Kokuria , Niabella , and Rhodobacteraceae, while in Costa Rica we found Halomonas and Pseudomonas in Sarapiquí, and Acinetobacter and Citrobacter in Turrialba. This is the first report of Niabella associated with the amphibian skin. The core microbiome represented 128 Operational Taxonomic Units (OTUs) mainly from five genera shared among all samples, which may represent the symbiotic Rhinella 's skin. These results provide insights into the habitat-induced microbial changes facing this amphibian species. The differences in the microbial diversity in

Benthic assemblages, biodiversity and invasiveness in marinas and commercial harbours: an investigation using a bioindicator group.

PubMed

Megina, Cesar; González-Duarte, Manuel M; López-González, Pablo J

2016-01-01

Fouling communities on artificial marine structures are generally different from benthic communities in natural rocky habitats. However, they may also differ among different types of artificial structures. Two artificial structures in direct contact with arriving vessels were compared: floating pontoons within recreational marinas, and sea-walls within commercial harbours. Natural rocky habitats were used as a reference, and the genus Eudendrium (Cnidaria, Hydrozoa) was chosen as a bioindicator. The assemblages were different among the three types of habitat studied, with different species characterising each habitat. The probability of finding an invasive Eudendrium species was significantly higher on pontoons. Diversity was the lowest on pontoons, but it was not significantly different between sea-walls and natural rocks. In general, a barrier to the spread of exotic species exists between harbours and natural rocky habitats. Floating pontoons seem to be a less suitable habitat for native fauna and a key element in marine biological invasions.

Reproductive strategy of the intertidal seagrass Zostera japonica under different levels of disturbance and tidal inundation

NASA Astrophysics Data System (ADS)

Suonan, Zhaxi; Kim, Seung Hyeon; Qin, Le-Zheng; Lee, Kun-Seop

2017-10-01

Zostera japonica populations along the coastline of the northwestern Pacific Ocean are declining, mainly due to anthropogenic and natural disturbances. Although reproductive strategy is an important factor in achieving population persistence, changes in the reproductive strategy of Z. japonica under anthropogenic disturbances and tidal stresses are largely unknown. Thus, the duration and frequency of flowering, reproductive effort, potential seed production, and seed density in sediments were measured at three study stations (undisturbed upper, undisturbed lower, and disturbed stations), which were classified based on the levels of inundation stress and clamming activity, in monospecific meadows of Z. japonica on the southern coast of Korea. The flowering duration was approximately six months in the disturbed station, with disturbance due to clam harvesting, whereas the duration was about five months in the undisturbed lower station, and only three months in the undisturbed upper station. The maximum flowering frequency was 25.5% in the disturbed station, which was approximately 4- and 2-fold higher than in the undisturbed upper (6.1%) and lower (12.3%) stations, respectively. A similar trend in reproductive effort was also found among the three study stations. Potential seed production was 7850, 6220, and 1560 seeds m-2 in the disturbed, undisturbed lower, and undisturbed upper stations, respectively. The annual maximum seed density in sediments was also higher in the disturbed and undisturbed lower stations than in the undisturbed upper station, but the densities were relatively low (ranging from 71 to 254 seeds m-2) at all three study stations. It was found that the allocation to sexual reproduction was highest in the disturbed station, followed by the undisturbed lower station, and lowest in the undisturbed upper station, suggesting that sexual reproduction in Z. japonica tends to be enhanced under disturbed and inundated environmental conditions for population

Carbon isotope fractionation in the mangrove Avicennia marina has implications for food web and blue carbon research

NASA Astrophysics Data System (ADS)

Kelleway, Jeffrey J.; Mazumder, Debashish; Baldock, Jeffrey A.; Saintilan, Neil

2018-05-01

The ratio of stable isotopes of carbon (δ13C) is commonly used to track the flow of energy among individuals and ecosystems, including in mangrove forests. Effective use of this technique requires understanding of the spatial variability in δ13C among primary producer(s) as well as quantification of the isotopic fractionations that occur as C moves within and among ecosystem components. In this experiment, we assessed δ13C variation in the cosmopolitan mangrove Avicennia marina across four sites of varying physico-chemical conditions across two estuaries. We also compared the isotopic values of five distinct tissue types (leaves, woody stems, cable roots, pneumatophores and fine roots) in individual plants. We found a significant site effect (F3, 36 = 15.78; P < 0.001) with mean leaf δ13C values 2.0‰ more depleted at the lowest salinity site compared to the other locations. There was a larger within-plant fractionation effect, however, with leaf samples (mean ± SE = -29.1 ± 0.2) more depleted in 13C than stem samples (-27.1 ± 0.1), while cable root (-25. 8 ± 0.1), pneumatophores (-25.7 ± 0.1) and fine roots (-26.0 ± 0.2) were more enriched in 13C relative to both aboveground tissue types (F4, 36 = 223.45; P < 0.001). The within-plant δ13C fractionation we report for A. marina is greater than that reported in most other ecosystems. This has implications for studies of estuarine carbon cycling. The consistent and large size of the fractionation from leaf to woody stem (∼2.0‰) and mostly consistent fractionation from leaf to root tissues (>3.0‰) means that it may now be possible to partition the individual contributions of various mangrove tissues to estuarine food webs. Similarly, the contributions of mangrove leaves, woody debris and belowground sources to blue carbon stocks might also be quantified. Above all, however, our results emphasize the importance of considering appropriate mangrove tissue types when using δ13C to trace carbon cycling in

Carbon and nitrogen dynamics of the intertidal seagrass, Zostera japonica, on the southern coast of the Korean peninsula

NASA Astrophysics Data System (ADS)

Kim, Jong-Hyeob; Kim, Seung Hyeon; Kim, Young Kyun; Lee, Kun-Seop

2016-12-01

Seagrasses require a large amount of nutrient assimilation to support high levels of production, and thus nutrient limitation for growth often occurs in seagrass habitats. Seagrasses can take up nutrients from both the water column and sediments. However, since seagrasses inhabiting in the intertidal zones are exposed to the air during low tide, the intertidal species may exhibit significantly different carbon (C) and nitrogen (N) dynamics compared to the subtidal species. To examine C and N dynamics of the intertidal seagrass, Zostera japonica, C and N content and stable isotope ratios of above- and below-ground tissues were measured monthly at the three intertidal zones in Koje Bay on the southern coast of Korea. The C and N content and stable isotope (δ13C and δ15N) ratios of seagrass tissues exhibited significant seasonal variations. Both leaf and rhizome C content were not significantly correlated with productivity. Leaf δ13C values usually exhibited negative correlations with leaf productivity. These results of tissue C content and δ13C values suggest that photosynthesis of Z. japonica in the study site was not limited by inorganic C supply, and sufficient inorganic C was provided from the atmosphere. The tissue N content usually exhibited negative correlations with leaf productivity except at the upper intertidal zone, suggesting that Z. japonica growth was probably limited by N availability during high growing season. In the upper intertidal zone, no correlations between leaf productivity and tissue elemental content and stable isotope ratios were observed due to the severely suppressed growth caused by strong desiccation stress.

A comparative analysis of benthic nematode assemblages from Zostera noltii beds before and after a major vegetation collapse

NASA Astrophysics Data System (ADS)

Materatski, Patrick; Vafeiadou, Anna-Maria; Ribeiro, Rui; Moens, Tom; Adão, Helena

2015-12-01

Benthic nematodes are widely regarded as very suitable organisms to monitor potential ecological effects of natural and anthropogenic disturbances in aquatic ecosystems. During 2008, the seagrass beds of Zostera noltii located in the Mira estuary (SW Portugal) disappeared completely. However, during 2009, slight symptoms of natural recovery were observed, a process which has since evolved intermittently. This study aims to investigate changes in patterns of nematode density, diversity, and trophic composition between two distinct habitat conditions: "before" the collapse of seagrass beds, and during the early recovery "after" the seagrass habitat loss, through the analysis of: i) temporal and spatial distribution patterns of nematode communities, and ii) the most important environmental variables influencing the nematode assemblages. The following hypotheses were tested: i) there would be differences in nematode assemblage density, biodiversity and trophic composition during both ecological conditions, "before" and "after"; and ii) there would be differences in nematode assemblage density, biodiversity and trophic composition at different sampling occasions during both ecological conditions. Nematode density and diversity were significantly different between the two ecological situations. A higher density was recorded before, but a higher diversity was evident after the collapse of Z. noltii. In spite of the disturbance caused by the seagrass habitat loss in the Mira estuary, the nematode trophic composition did not significantly differ between the before and after seagrass collapse situations. Despite the significant differences found among sampling occasions, a consistent temporal pattern was not evident. The response of nematode communities following this extreme event exhibited considerable resistance and resilience to the new environmental conditions.

A new species of nematode (Molineidae) from Rhinella marina (Amphibia: Bufonidae) in Guerrero, México.

PubMed

Ruiz-Torres, Nallely; García-Prieto, Luis; Osorio-Sarabia, David; Violante-González, Juan

2013-06-01

Oswaldocruzia lamotheargumedoi n. sp., inhabiting the intestine of the cane toad, Rhinella marina (L.), in Laguna de Coyuca, Guerrero, México, is described here. The new species differs from 10 congeners infecting bufonid hosts because it has a type I bursa. In contrast, 7 of these species have type II bursa and 3 more a type III bursa. The species most similar to the species described herein is Oswaldocruzia pipiens Walton, 1929 . These 2 species share traits such as body size, bursa type, presence of cervical alae, and dorsal ray morphology. Nevertheless, both species can be distinguished based on the number of synlophe ridges at mid-body (54-56 for O. lamotheargumedoi vs. 45-48 for O. pipiens) and by the presence of a chitinous support in the long, and well developed, cervical alae of O. pipiens. In the new species, these structures are short, poorly developed, and lack chitinous support. Previous records of species of Oswaldocruzia in México include Oswaldocruzia subauricularis (Rudolphi, 1819) Travassos, 1917 in the Neotropical Realm and O. pipiens in the Nearctic.

Substrate Variations and its Relationship and Impact on the Distribution of Eelgrass Beds in Griffin Bay, Washington

NASA Astrophysics Data System (ADS)

Sopha, A.; Greene, H.; Wyllie-Echeverria, S.; Harmsen, F. J.

2010-12-01

Eelgrass is considered an important indicator species for the health of the oceans; it provides nearshore habitat to many marine organisms and also acts as a source of protection for migrating populations of juvenile salmon and other fish species including forage fish. Since the late 1980s, there has been a drastic decline in eelgrass beds within the surrounding marine areas of Washington State; specifically in the species Zostera marina. Previous studies have focused on potential impacts such as bacterial infections and loss of sunlight from docks, shoreline tree canopy overgrowth and permanently anchored boats. In specific locations, sawmill waste has prevented the regeneration of eelgrass. In this study, sediment samples, along with video transects, were collected from Griffin Bay, Washington, located within the San Juan Archipelago to determine if substrate conditions have any impact on the distribution, appearance, disappearance, and health of the eelgrass beds. Initial findings indicate that in fact, eelgrass is increasing with growth beyond the area in which their distribution was previously documented. This is in contrast to other areas where eelgrass is in decline. Final results have yet to be analyzed.

Tissue-specific expression of the gene for a putative plasma membrane H(+)-ATPase in a seagrass.

PubMed Central

Fukuhara, T; Pak, J Y; Ohwaki, Y; Tsujimura, H; Nitta, T

1996-01-01

A cDNA clone corresponding to the gene (ZHA1) for a putative plasma membrane H(+)-ATPase of a seagrass (Zostera marina L.) was isolated and sequenced. Comparison of the amino acid predicted sequence from the nucleotide sequence of ZHA1 with those encoded by known genes for plasma membrane H(+)-ATPases from other plants indicated that ZHA1 is most similar to the gene (PMA4) for a plasma membrane H(+)-ATPase in a tobacco (84.4%). Northern hybridization indicated that ZHA1 was strongly expressed in mature leaves, which are exposed to seawater and have the ability of tolerate salinity; ZHA1 was weakly expressed in immature leaves, which are protected from seawater by tightly enveloping sheaths and are sensitive to salinity. In mature leaves, in situ hybridization revealed that ZHA1 was expressed specifically in epidermal cells, the plasma membranes of which were highly invaginated and morphologically similar to those of typical transfer cells. Therefore, the differentiation of the transfer cell-like structures, accompanied by the high-level expression of ZHA1, in the epidermal cells of mature leaves in particular may be important for the excretion of salt by these cells. PMID:8587992

Distribution of macroalgae and seaweed in the Azov Sea, Kerch Strait, and Taman Bay

NASA Astrophysics Data System (ADS)

Stepanian, O. V.

2009-06-01

The analysis of the macroalgae distribution along the salinity gradient in the Azov Sea, the Kerch strait, and Taman Bay during the summer allowed finding two macroalgae complexes. The first complex (brackish) is formed by algae belonging to the Enteromorpha, Cladophora, Rhizoclonium, and Chaetomorpha genera in the Taganrog Gulf. The second complex (marine) with dominating algae belonging to the Enteromorpha, Chaetomorpha, Ceramium, and Polysiphonia inhabits the littoral part of the Azov Sea itself, the Kerch Strait, and Taman Bay. The saprobe analysis of the flora showed that the majority of macroalgae species inhabiting the Azov Sea are represented by meso- and polysaprobes and a small number of oligosaprobe species inhabit the Kerch Strait. The biggest species diversity of macroalgae was noted in the southwestern part of the sea; the value of Shannon’s index was 0.65 in the Taganrog Gulf, 1.04 in the Azov Sea, 1.38 in Taman Bay. The leading role in the littoral communities of Taganrog Gulf belongs to aquatic flowering plants with Potamogeton perfoliatus being dominant; as the salinity increases, the share of such species as P. pectinatus, Zostera marina, Z. noltii, Ruppia maritime, and Zannichellia major starts to increase.

Analytical determination of the reducing and stabilization agents present in different Zostera noltii extracts used for the biosynthesis of gold nanoparticles.

PubMed

Zarzuela, Rafael; Luna, Manuel Jesús; Gil, María Luisa Almoraima; Ortega, María Jesús; Palacios-Santander, José María; Naranjo-Rodríguez, Ignacio; Delgado, Juan José; Cubillana-Aguilera, Laura María

2018-02-01

The objective of this work was to ascertain the nature of the components responsible for the reducing and stabilizing properties of Zostera noltii extracts that lead to gold nanoparticle formation using chemical techniques of analysis. In order to achieve this aim, we try the synthesis of AuNPs with three different extracts from plants collected in the Bay of Cádiz (Spain). The n-butanol extract produced the best results. Taking this into account, four fractions were isolated by Sephadex LH-20 column chromatography from this extract and we studied their activity. The chemical study of these fractions led to the isolation of several flavone sulfates and these were identified as the species' responsible for the formation and stabilization of the AuNPs. Flavone sulfates were purified by high performance liquid chromatography and the structures were established by means of spectroscopic methods nuclear magnetic resonance and mass spectroscopy. AuNPs have an average lifetime of about 16weeks. Additionally, the morphology and crystalline phase of the gold nanoparticles were characterized by transmission electron microscopy. The composition of the nanoparticles was evaluated by electron diffraction and energy dispersive X-ray spectroscopy. An 88% of the gold nanoparticles has a diameter in the range 20-35nm, with an average size of 26±2nm. Copyright © 2017 Elsevier B.V. All rights reserved.

Limited toxicity of NH(x) pulses on an early and late successional tropical seagrass species: interactions with pH and light level.

PubMed

Christianen, M J A; van der Heide, T; Bouma, T J; Roelofs, J G M; van Katwijk, M M; Lamers, L P M

2011-07-01

Seagrasses have declined at a global scale due to light reduction and toxicity events, caused by eutrophication and increased sediment loading. Although several studies have tested effects of light reduction and toxicants on seagrasses, there is at present no information available on their interacting effects. In a full-factorial 5-day laboratory experiment, we studied short-term interactive effects of light conditions, pH and reduced nitrogen (NH(x)) in the water layer, mimicking pulses of river discharge, on the tropical early successional species Halodule uninervis and the late successional species Thalassia hemprichii. In contrast to recent results reported for the temperate species Zostera marina, increased NH(x) supply did not affect leaf mortality or photochemical efficiency in H. uninervis and in 7 out of 8 treatments for T. hemprichii. However, both tropical species demonstrated striking differences in nitrogen accumulation, free amino acid composition and free NH₃ accumulation. The increase in tissue nitrogen content was two times higher for H. uninervis than for T. hemprichii. Nitrogen stored as free amino acids (especially asparagine) only increased in H. uninervis. High pH only affected T. hemprichii, but only when not shaded, by doubling its free NH₃ concentrations, concomitantly decreasing its photosynthetic efficiency. Our results indicate that the early successional H. uninervis has higher tolerance to high NH(x) loads as compared to the late successional T. hemprichii. H. uninervis was better able to avoid toxic internal NH(x) levels by further assimilating glutamine into asparagine in contrast to T. hemprichii. Moreover, both tropical species seem to cope much better with high NH(x) than the temperate Z. marina. The implications for the distribution and succession of seagrass species under high nutrient loads are discussed. Copyright © 2011 Elsevier B.V. All rights reserved.

Evaluation of Methods to Increase Light Under Ferry Terminals

DOE Office of Scientific and Technical Information (OSTI.GOV)

Blanton, Susan L.; Thom, Ronald M.; Borde, Amy B.

2002-01-02

To address concerns of resource agencies about the potential impacts of ferry terminal expansion on valuable habitat functions and resource use of nearshore areas, the Pacific Northwest National Laboratory (PNNL), in partnership with the Washington State Department of Transportation (WSDOT), conducted field trials with off-the-shelf products that promote light passage through dock structures. These products included a SunTunnel, deck prisms, and a metal halide greenhouse light. Light measurements (photosynthetically active radiation, PAR) were also recorded beneath glass blocks and a metal grating installed at Clinton Ferry Terminal on Whidbey Island, WA. A review of other studies measuring the effects ofmore » dock shading and alternate dock materials was conducted. PAR measurements from this study were related to minimum requirements for eelgrass Zostera marina photosynthesis and to the known maximum photosynthetic ?saturation? rate for Z. marina. We also related PAR measurements to what we know about light effects on juvenile salmonid feeding and passage under overwater structures. Of the light technologies tested, the metal halide light, SunTunnel, glass blocks, and grating potentially provide enough light for eelgrass growth underneath a ferry terminal with similar construction to the Clinton Ferry Terminal. All of these technologies would potentially provide adequate light under conditions where eelgrass is located at its upper depth limit and a dock is close to the water surface. Light levels needed to allow fish to feed and to form schools are low (~ 1-2 mmol/m2/s), and much less than those required for photosynthesis. Our research indicates that installing any of the tested light products would likely maintain light levels under the dock above those required for active feeding by juvenile salmonids.« less

Omega-3 fatty acids are oxygenated at the n-7 carbon by the lipoxygenase domain of a fusion protein in the cyanobacterium Acaryochloris marina

PubMed Central

Gao, Benlian; Boeglin, William E.; Brash, Alan R.

2009-01-01

Lipoxygenases (LOX) are found in most organisms that contain polyunsaturated fatty acids, usually existing as individual genes although occasionally encoded as a fusion protein with a catalase-related hemoprotein. Such a fusion protein occurs in the cyanobacterium Acaryochloris marina and herein we report the novel catalytic activity of its LOX domain. The full-length protein and the C-terminal LOX domain were expressed in Escherichia coli, and the catalytic activities characterized by UV, HPLC, GC-MS, and CD. All omega-3 polyunsaturates were oxygenated by the LOX domain at the n-7 position and with R stereospecificity: α-linolenic and the most abundant fatty acid in A. marina, stearidonic acid (C18.4ω3), are converted to the corresponding 12R-hydroperoxides, eicosapentaenoic acid to its 14R-hydroperoxide, and docosahexaenoic acid to its 16R-hydroperoxide. Omega-6 polyunsaturates were oxygenated at the n-10 position, forming 9R-hydroperoxy-octadecadienoic acid from linoleic acid and 11R-hydroperoxy-eicosatetraenoic acid from arachidonic acid. The metabolic transformation of stearidonic acid by the full-length fusion protein entails its 12R oxygenation with subsequent conversion by the catalase-related domain to a novel allene epoxide, a likely precursor of cyclopentenone fatty acids or other signaling molecules (Gao et al, J. Biol. Chem. 284:22087-98, 2009). Although omega-3 fatty acids and lipoxygenases are of widespread occurrence, this appears to be the first description of a LOX-catalyzed oxygenation that specifically utilizes the terminal pentadiene of omega-3 fatty acids. PMID:19786119

Offshore Energy Mapping for Northeast Atlantic and Mediterranean: MARINA PLATFORM project

NASA Astrophysics Data System (ADS)

Kallos, G.; Galanis, G.; Spyrou, C.; Kalogeri, C.; Adam, A.; Athanasiadis, P.

2012-04-01

Deep offshore ocean energy mapping requires detailed modeling of the wind, wave, tidal and ocean circulation estimations. It requires also detailed mapping of the associated extremes. An important issue in such work is the co-generation of energy (generation of wind, wave, tides, currents) in order to design platforms on an efficient way. For example wind and wave fields exhibit significant phase differences and therefore the produced energy from both sources together requires special analysis. The other two sources namely tides and currents have different temporal scales from the previous two. Another important issue is related to the estimation of the environmental frequencies in order to avoid structural problems. These are issues studied at the framework of the FP7 project MARINA PLATFORM. The main objective of the project is to develop deep water structures that can exploit the energy from wind, wave, tidal and ocean current energy sources. In particular, a primary goal will be the establishment of a set of equitable and transparent criteria for the evaluation of multi-purpose platforms for marine renewable energy. Using these criteria, a novel system set of design and optimisation tools will be produced addressing new platform design, component engineering, risk assessment, spatial planning, platform-related grid connection concepts, all focussed on system integration and reducing costs. The University of Athens group is in charge for estimation and mapping of wind, wave, tidal and ocean current resources, estimate available energy potential, map extreme event characteristics and provide any additional environmental parameter required.

A Method for Calculating the Area of Zostera marina Leaves from Digital Images with Noise Induced by Humidity Content

PubMed Central

Leal-Ramirez, Cecilia

2014-01-01

Despite the ecological importance of eelgrass, nowadays anthropogenic influences have produced deleterious effects in many meadows worldwide. Transplantation plots are commonly used as a feasible remediation scheme. The characterization of eelgrass biomass and its dynamics is an important input for the assessment of the overall status of both natural and transplanted populations. Particularly, in restoration plots it is desirable to obtain nondestructive assessments of these variables. Allometric models allow the expression of above ground biomass and productivity of eelgrass in terms of leaf area, which provides cost effective and nondestructive assessments. Leaf area in eelgrass can be conveniently obtained by the product of associated length and width. Although these variables can be directly measured on most sampled leaves, digital image methods could be adapted in order to simplify measurements. Nonetheless, since width to length ratios in eelgrass leaves could be even negligible, noise induced by leaf humidity content could produce misidentification of pixels along the peripheral contour of leaves images. In this paper, we present a procedure aimed to produce consistent estimations of eelgrass leaf area in the presence of the aforementioned noise effects. Our results show that digital image procedures can provide reliable, nondestructive estimations of eelgrass leaf area. PMID:24892089

EFFECT OF AMBIENT LIGHT, AERIAL EXPOSURE, AND SEASON ON EELGRASS (ZOSTERA MARINA) METRICS IN A NORTHEAST PACIFIC (USA) ESTUARY

EPA Science Inventory

Although light is the principal factor controlling the lower depth limit of seagrasses, little attention has been given to how reduced winter lighting may affect intertidal plants. In the present study intertidal light intensity, temperature, and aerial exposure were measured ove...

Effect of multiple stressors on eelgrass Zostera marina L. from the Pacific Northwest, USA: Manipulation of temperature and nutrients

EPA Science Inventory

Estuarine eelgrass beds in the Pacific Northwest (PNW) are being exposed to a range of natural and anthropogenic stressors and climate change. These stresses include increased temperatures, sea level rise, and high nutrient inputs, all of which may directly affect the productivi...

First report of exotic ticks (Amblyomma rotundatum) parasitizing invasive cane toads (Rhinella marina) on the Island of Hawai'i.

PubMed

Kelehear, Crystal; Hudson, Cameron M; Mertins, James W; Shine, Richard

2017-02-01

Our surveys of 1401 invasive cane toads (Rhinella marina) from the Hawaiian islands of Hawai'i, O'ahu, and Maui revealed the presence of an exotic tick, Amblyomma rotundatum. Immature and adult female ticks infested three wild adult toads at a single site in the vicinity of a zoo south of Hilo, Island of Hawai'i, Hawai'i, USA. We found no tick-infested toads on O'ahu or Maui. This tick infests cane toads in their native Neotropical range, but it was excluded from Hawai'i when the original founder toads were introduced over 80 years ago. The circumstances of our discovery suggest that A. rotundatum was independently and belatedly introduced to Hawai'i with imported zoo animals, and Hawai'i now joins Florida as the second U.S. state where this tick is established. Published by Elsevier GmbH.

The effect of wind induced bottom shear stress and salinity on Zostera noltii replanting in a Mediterranean coastal lagoon

NASA Astrophysics Data System (ADS)

Alekseenko, E.; Roux, B.; Fougere, D.; Chen, P. G.

2017-03-01

The paper concerns the wind influence on bottom shear stress and salinity levels in a Mediterranean semi-enclosed coastal lagoon (Etang de Berre), with respect to a replanting program of Zostera noltii. The MARS3D numerical model is used to analyze the 3D current, salinity and temperature distribution induced by three meteorological, oceanic and anthropogenic forcings in this lagoon. The numerical model has been carefully validated by comparison with daily observations of the vertical salinity and temperature profiles at three mooring stations, for one year. Then, two modelling scenarios are considered. The first scenario (scen.#1), starting with a homogeneous salinity of S = 20 PSU and without wind forcing, studies a stratification process under the influence of a periodic seawater inflow and a strong freshwater inflow from a hydropower plant (250 m3/s). Then, in the second scenario (scen.#2), we study how a strong wind of 80 km/h can mix the haline stratification obtained at the end of scen.#1. The most interesting results concern four nearshore replanting areas; two are situated on the eastern side of EB and two on the western side. The results of scen.#2 show that all these areas are subject to a downwind coastal jet. Concerning bottom salinity, the destratification process is very beneficial; it always remains greater than 12 PSU for a N-NW wind of 80 km/h and an hydropower runoff of 250 m3/s. Special attention is devoted to the bottom shear stress (BSS) for different values of the bottom roughness parameter (for gravels, sands and silts), and to the bottom salinity. Concerning BSS, it presents a maximum near the shoreline and decreases along transects perpendicular to the shoreline. There exists a zone, parallel to the shoreline, where BSS presents a minimum (close to zero). When comparing the BSS value at the four replanting areas with the critical value, BSScr, at which the sediment mobility would occur, we see that for the smaller roughness values (ranging

Phenolic chemistry of the seagrass Zostera noltei Hornem. Part 1: First evidence of three infraspecific flavonoid chemotypes in three distinctive geographical regions.

PubMed

Grignon-Dubois, Micheline; Rezzonico, Bernadette

2018-02-01

The flavonoid content of Zostera noltei leaves was investigated over a broad spatial scale using chromatographic and spectroscopic techniques (HPLC-DAD, LC/MS and NMR). Samples were collected at fifteen localities covering Mediterranean Sea and NE Atlantic coast, and representative of three types of coastal ecosystems: mesotidal bays, coastal lagoons, and open-sea. Three geographically distinct flavonoid chemotypes were identified on the basis of their respective major compound. One is characterized by apigenin 7-sulfate (Eastern part of Gulf of Cadiz), one by diosmetin 7-sulfate (French Atlantic coast and Mediterranean Sea), and the third contained similar quantities of the above two compounds (Mauritania and South Portugal). Our results show that metabolomic profiling using a combination of analytical techniques is a tool of choice to characterize chemical phenotype accurately. This work emphasizes for the first time the spatial variability in the flavonoid chemistry of Z. noltei throughout Atlantic and Mediterranean range, and constitutes the first report of chemical races in the Zosteraceae family. This infraspecific chemical differentiation should be considered when dealing with the role of Z. noltei in coastal ecosystems or in the selection of the best population donor for Z. noltei beds restoration. Combined with molecular identification, phenolic fingerprinting might be helpful to elucidate the evolutionary history of Z. noltei. Copyright © 2017 Elsevier Ltd. All rights reserved.

Blood lead levels, δ-ALAD inhibition, and hemoglobin content in blood of giant toad (Rhinella marina) to assess lead exposure in three areas surrounding an industrial complex in Coatzacoalcos, Veracruz, Mexico.

PubMed

Ilizaliturri-Hernández, César Arturo; González-Mille, Donaji Josefina; Mejía-Saavedra, Jesús; Espinosa-Reyes, Guillermo; Torres-Dosal, Arturo; Pérez-Maldonado, Iván

2013-02-01

The Coatzacoalcos Region in Veracruz, Mexico houses one of the most important industrial complexes in Mexico and Latin America. Lead is an ubiquitous environmental pollutant which represents a great risk to human health and ecosystems. Amphibian populations have been recognized as biomonitors of changes in environmental conditions. The purpose of this research is to measure exposure to lead and evaluate hematological and biochemical effects in specimens of giant toads (Rhinella marina) taken from three areas surrounding an industrial complex in the Coatzacoalcos River downstream. Lead levels in toads' blood are between 10.8 and 70.6 μg/dL and are significantly higher in industrial sites. We have found a significant decrease in the delta-aminolevulinic acid dehydratase (δ-ALAD) activity in blood from 35.3 to 78 % for the urban-industrial and industrial sites, respectively. In addition, we have identified a strong inverse relationship between the δ-ALAD activity and the blood lead levels (r = -0.84, p < 0.001). Hemoglobin and mean corpuscular hemoglobin levels, as well as the condition factor, are found to be lower at industrial sites compared with the reference sites. Our results suggest that the R. marina can be considered a good biomonitor of the δ-ALAD activity inhibition and hematological alterations at low lead concentrations.

Proteome Analysis Reveals Extensive Light Stress-Response Reprogramming in the Seagrass Zostera muelleri (Alismatales, Zosteraceae) Metabolism

PubMed Central

Kumar, Manoj; Padula, Matthew P.; Davey, Peter; Pernice, Mathieu; Jiang, Zhijian; Sablok, Gaurav; Contreras-Porcia, Loretto; Ralph, Peter J.

2017-01-01

Seagrasses are marine ecosystem engineers that are currently declining in abundance at an alarming rate due to both natural and anthropogenic disturbances in ecological niches. Despite reports on the morphological and physiological adaptations of seagrasses to extreme environments, little is known of the molecular mechanisms underlying photo-acclimation, and/or tolerance in these marine plants. This study applies the two-dimensional isoelectric focusing (2D-IEF) proteomics approach to identify photo-acclimation/tolerance proteins in the marine seagrass Zostera muelleri. For this, Z. muelleri was exposed for 10 days in laboratory mesocosms to saturating (control, 200 μmol photons m−2 s−1), super-saturating (SSL, 600 μmol photons m−2 s−1), and limited light (LL, 20 μmol photons m−2 s−1) irradiance conditions. Using LC-MS/MS analysis, 93 and 40 protein spots were differentially regulated under SSL and LL conditions, respectively, when compared to the control. In contrast to the LL condition, Z. muelleri robustly tolerated super-saturation light than control conditions, evidenced by their higher relative maximum electron transport rate and minimum saturating irradiance values. Proteomic analyses revealed up-regulation and/or appearances of proteins belonging to the Calvin-Benson and Krebs cycle, glycolysis, the glycine cleavage system of photorespiration, and the antioxidant system. These proteins, together with those from the inter-connected glutamate-proline-GABA pathway, shaped Z. muelleri photosynthesis and growth under SSL conditions. In contrast, the LL condition negatively impacted the metabolic activities of Z. muelleri by down-regulating key metabolic enzymes for photosynthesis and the metabolism of carbohydrates and amino acids, which is consistent with the observation with lower photosynthetic performance under LL condition. This study provides novel insights into the underlying molecular photo-acclimation mechanisms in Z. muelleri, in

Effects of CO(2) enrichment on photosynthesis, growth, and nitrogen metabolism of the seagrass Zostera noltii.

PubMed

Alexandre, Ana; Silva, João; Buapet, Pimchanok; Björk, Mats; Santos, Rui

2012-10-01

Seagrass ecosystems are expected to benefit from the global increase in CO(2) in the ocean because the photosynthetic rate of these plants may be C(i)-limited at the current CO(2) level. As well, it is expected that lower external pH will facilitate the nitrate uptake of seagrasses if nitrate is cotransported with H(+) across the membrane as in terrestrial plants. Here, we investigate the effects of CO(2) enrichment on both carbon and nitrogen metabolism of the seagrass Zostera noltii in a mesocosm experiment where plants were exposed for 5 months to two experimental CO(2) concentrations (360 and 700 ppm). Both the maximum photosynthetic rate (P(m)) and photosynthetic efficiency (α) were higher (1.3- and 4.1-fold, respectively) in plants exposed to CO(2)-enriched conditions. On the other hand, no significant effects of CO(2) enrichment on leaf growth rates were observed, probably due to nitrogen limitation as revealed by the low nitrogen content of leaves. The leaf ammonium uptake rate and glutamine synthetase activity were not significantly affected by increased CO(2) concentrations. On the other hand, the leaf nitrate uptake rate of plants exposed to CO(2)-enriched conditions was fourfold lower than the uptake of plants exposed to current CO(2) level, suggesting that in the seagrass Z. noltii nitrate is not cotransported with H(+) as in terrestrial plants. In contrast, the activity of nitrate reductase was threefold higher in plant leaves grown at high-CO(2) concentrations. Our results suggest that the global effects of CO(2) on seagrass production may be spatially heterogeneous and depend on the specific nitrogen availability of each system. Under a CO(2) increase scenario, the natural levels of nutrients will probably become limiting for Z. noltii. This potential limitation becomes more relevant because the expected positive effect of CO(2) increase on nitrate uptake rate was not confirmed.

Proteome Analysis Reveals Extensive Light Stress-Response Reprogramming in the Seagrass Zostera muelleri (Alismatales, Zosteraceae) Metabolism.

PubMed

Kumar, Manoj; Padula, Matthew P; Davey, Peter; Pernice, Mathieu; Jiang, Zhijian; Sablok, Gaurav; Contreras-Porcia, Loretto; Ralph, Peter J

2016-01-01

Seagrasses are marine ecosystem engineers that are currently declining in abundance at an alarming rate due to both natural and anthropogenic disturbances in ecological niches. Despite reports on the morphological and physiological adaptations of seagrasses to extreme environments, little is known of the molecular mechanisms underlying photo-acclimation, and/or tolerance in these marine plants. This study applies the two-dimensional isoelectric focusing (2D-IEF) proteomics approach to identify photo-acclimation/tolerance proteins in the marine seagrass Zostera muelleri . For this, Z. muelleri was exposed for 10 days in laboratory mesocosms to saturating (control, 200 μmol photons m -2 s -1 ), super-saturating (SSL, 600 μmol photons m -2 s -1 ), and limited light (LL, 20 μmol photons m -2 s -1 ) irradiance conditions. Using LC-MS/MS analysis, 93 and 40 protein spots were differentially regulated under SSL and LL conditions, respectively, when compared to the control. In contrast to the LL condition, Z. muelleri robustly tolerated super-saturation light than control conditions, evidenced by their higher relative maximum electron transport rate and minimum saturating irradiance values. Proteomic analyses revealed up-regulation and/or appearances of proteins belonging to the Calvin-Benson and Krebs cycle, glycolysis, the glycine cleavage system of photorespiration, and the antioxidant system. These proteins, together with those from the inter-connected glutamate-proline-GABA pathway, shaped Z. muelleri photosynthesis and growth under SSL conditions. In contrast, the LL condition negatively impacted the metabolic activities of Z. muelleri by down-regulating key metabolic enzymes for photosynthesis and the metabolism of carbohydrates and amino acids, which is consistent with the observation with lower photosynthetic performance under LL condition. This study provides novel insights into the underlying molecular photo-acclimation mechanisms in Z. muelleri , in addition

Effects of CO2 enrichment on photosynthesis, growth, and nitrogen metabolism of the seagrass Zostera noltii

PubMed Central

Alexandre, Ana; Silva, João; Buapet, Pimchanok; Björk, Mats; Santos, Rui

2012-01-01

Seagrass ecosystems are expected to benefit from the global increase in CO2 in the ocean because the photosynthetic rate of these plants may be Ci-limited at the current CO2 level. As well, it is expected that lower external pH will facilitate the nitrate uptake of seagrasses if nitrate is cotransported with H+ across the membrane as in terrestrial plants. Here, we investigate the effects of CO2 enrichment on both carbon and nitrogen metabolism of the seagrass Zostera noltii in a mesocosm experiment where plants were exposed for 5 months to two experimental CO2 concentrations (360 and 700 ppm). Both the maximum photosynthetic rate (Pm) and photosynthetic efficiency (α) were higher (1.3- and 4.1-fold, respectively) in plants exposed to CO2-enriched conditions. On the other hand, no significant effects of CO2 enrichment on leaf growth rates were observed, probably due to nitrogen limitation as revealed by the low nitrogen content of leaves. The leaf ammonium uptake rate and glutamine synthetase activity were not significantly affected by increased CO2 concentrations. On the other hand, the leaf nitrate uptake rate of plants exposed to CO2-enriched conditions was fourfold lower than the uptake of plants exposed to current CO2 level, suggesting that in the seagrass Z. noltii nitrate is not cotransported with H+ as in terrestrial plants. In contrast, the activity of nitrate reductase was threefold higher in plant leaves grown at high-CO2 concentrations. Our results suggest that the global effects of CO2 on seagrass production may be spatially heterogeneous and depend on the specific nitrogen availability of each system. Under a CO2 increase scenario, the natural levels of nutrients will probably become limiting for Z. noltii. This potential limitation becomes more relevant because the expected positive effect of CO2 increase on nitrate uptake rate was not confirmed. PMID:23145346

CO2 and nutrient-driven changes across multiple levels of organization in Zostera noltii ecosystems

NASA Astrophysics Data System (ADS)

Martínez-Crego, B.; Olivé, I.; Santos, R.

2014-12-01

Increasing evidence emphasizes that the effects of human impacts on ecosystems must be investigated using designs that incorporate the responses across levels of biological organization as well as the effects of multiple stressors. Here we implemented a mesocosm experiment to investigate how the individual and interactive effects of CO2 enrichment and eutrophication scale-up from changes in primary producers at the individual (biochemistry) or population level (production, reproduction, and/or abundance) to higher levels of community (macroalgae abundance, herbivory, and global metabolism), and ecosystem organization (detritus release and carbon sink capacity). The responses of Zostera noltii seagrass meadows growing in low- and high-nutrient field conditions were compared. In both meadows, the expected CO2 benefits on Z. noltii leaf production were suppressed by epiphyte overgrowth, with no direct CO2 effect on plant biochemistry or population-level traits. Multi-level meadow response to nutrients was faster and stronger than to CO2. Nutrient enrichment promoted the nutritional quality of Z. noltii (high N, low C : N and phenolics), the growth of epiphytic pennate diatoms and purple bacteria, and shoot mortality. In the low-nutrient meadow, individual effects of CO2 and nutrients separately resulted in reduced carbon storage in the sediment, probably due to enhanced microbial degradation of more labile organic matter. These changes, however, had no effect on herbivory or on community metabolism. Interestingly, individual effects of CO2 or nutrient addition on epiphytes, shoot mortality, and carbon storage were attenuated when nutrients and CO2 acted simultaneously. This suggests CO2-induced benefits on eutrophic meadows. In the high-nutrient meadow, a striking shoot decline caused by amphipod overgrazing masked the response to CO2 and nutrient additions. Our results reveal that under future scenarios of CO2, the responses of seagrass ecosystems will be complex and

H.R. 1002: A Bill to amend the Oil Pollution Act of 1990 to exempt marinas from the financial responsibility requirements applicable to off shore facilities under the Act. Introduced in the House of Representatives, One Hundred Fourth Congress, First session

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1995-12-31

This document contains H.R. 1002, A Bill to Amend the Oil Pollution Act of 1990 to exempt marinas from the financial responsibility requirements applicable to offshore facilities under that Act. This Bill was introduced in the House of Representatives, 104th Congress, First Session, February 21, 1995.

Impacts of Groundwater Discharge at Myora Springs (North Stradbroke Island, Australia) on the Phenolic Metabolism of Eelgrass, Zostera muelleri, and Grazing by the Juvenile Rabbitfish, Siganus fuscescens

PubMed Central

Arnold, Thomas; Freundlich, Grace; Weilnau, Taylor; Verdi, Arielle; Tibbetts, Ian R.

2014-01-01

Myora Springs is one of many groundwater discharge sites on North Stradbroke Island (Queensland, Australia). Here spring waters emerge from wetland forests to join Moreton Bay, mixing with seawater over seagrass meadows dominated by eelgrass, Zostera muelleri. We sought to determine how low pH / high CO2 conditions near the spring affect these plants and their interactions with the black rabbitfish (Siganus fuscescens), a co-occurring grazer. In paired-choice feeding trials S. fuscescens preferentially consumed Z. muelleri shoots collected nearest to Myora Springs. Proximity to the spring did not significantly alter the carbon and nitrogen contents of seagrass tissues but did result in the extraordinary loss of soluble phenolics, including Folin-reactive phenolics, condensed tannins, and phenolic acids by ≥87%. Conversely, seagrass lignin contents were, in this and related experiments, unaffected or increased, suggesting a shift in secondary metabolism away from the production of soluble, but not insoluble, (poly)phenolics. We suggest that groundwater discharge sites such as Myora Springs, and other sites characterized by low pH, are likely to be popular feeding grounds for seagrass grazers seeking to reduce their exposure to soluble phenolics. PMID:25127379

Sinkhole hazard assessment in Lesina Marina area (Apulia, Italy)

NASA Astrophysics Data System (ADS)

Canora, F.; Caporale, F.; D'Angella, A.; Fidelibus, D.; Gutierrez, F.; Pellicani, R.; Spilotro, G.

2012-04-01

In "Lesina Marina" area, located in the north-western part of the Apulia region (Italy), near the Adriatic coast, sinkhole phenomena are particularly widespread and constitute a risk for the built-up area. These phenomena are due to the structure of the evaporitic rocks located in the study area and to the groundwater regime, influenced by the presence of a channel that connects the sea to the lagoon. The complex sea-channel-lagoon system produces an inland flow towards the channel modulated by the tide with a variable width according to the rules of the coastal aquifers. Further studies have been carried out in order to clarify the context and the causes of this instability phenomenon. A procedure for the sinkhole susceptibility and hazard assessment has been performed, in order to evaluate the spatial distribution of the most unstable areas and the potential spatio-temporal evolution of the phenomenon. The sinkhole susceptibility model has been created in GIS by assessing the spatial relationship between the sinkhole inventory map and a series of thematic maps relative to instability factors. The thematic layers selected for the study are nine and cover geometrical features of the surface, of the gypsum rockhead and of the incoherent soil cover, groundwater and daily and seasonal groundwater level variations. Daily groundwater variation in a semiconfined coastal aquifer can be related to the permeability and to the void structures of the evaporitic mass. In the years subsequent to 1980, when the first reports of the presence of sinkholes are dated, the evolution of these instabilities in terms of their number and of their increase of extension has been monitored with repeated surveys. These data were used for susceptibility model validation and to define the hazard model. The selected layers revealed to be very useful in describing and mapping the hazard coming from suffusion sinkholes in the study area. The sinkhole hazard assessment is carried out, according to

Nickel, vanadium, and lead as indicators of sediment contamination of marina, refinery, and shipyard areas.

PubMed

Pereira, Thayane Lúcia; Wallner-Kersanach, Mônica; Costa, Luiza Dy Fonseca; Costa, Daniel Pereira; Baisch, Paulo Roberto Martins

2018-01-01

Metallic elements found in the aquatic environment may originate in areas where petroleum is refined and vessels are maintained and repaired. This study aims to assess contamination caused by nickel (Ni), lead (Pb), and vanadium (V) in sediment of the Lagoa dos Patos estuary (RS, Brazil) and to evaluate them as indicators of areas under the influence of petroleum products and antifouling paints. Surface sediments were collected in summer and in winter in areas of marinas, shipyards, refinery, and a control station. High Pb and V concentrations in shipyards and at the Yacht Club showed that some organisms may be affected by toxicity. High Pb results of the index of geoaccumulation (Igeo) were found at the Yacht Club and shipyards. Al, Ni, and V had similar distribution in the sediment in both seasons. Ni and V had high relation in winter at the Yacht Club and at the Santos Shipyard, thus suggesting that these elements come mainly from petroleum products. The same happened to the relations between Pb and V, as well as Pb and Ni at the Santos Shipyard. These elements are employed as useful tools as indicators to identify places with moderate to high localized anthropogenic inputs of petroleum derivatives and antifouling paints.

CARBON, NITROGEN, PHOSPHORUS AND HEAVY METAL BUDGETS: HOW LARGE IS THE EELGRASS (ZOSTERA MARINA L.) SINK IN A TEMPERATE ESTUARY?

EPA Science Inventory

Seagrasses are often heralded as sentinel or indicator species because they are long-lived and integrate biological, physical and chemical parameters (Schlacher-Hoenlinger and Schlacher, 1998; Hoven et al., 1999; Pergent-Martini and Pergent, 2000). Several studies have shown ...

Use of digital multispectral videography to assess seagrass distribution in San Quintin Bay, Baja California, Mexico

USGS Publications Warehouse

Ward, D.H.; Tibbitts, T.L.; Morton, Alexandra; Carrera-Gonzalez, Eduardo; Kempka, R.

2004-01-01

Apparent threats to the spatial distribution of seagrass in San Quintín Bay prompted us to make a detailed assessment of habitats in the bay. Six coastal habitats and three seagrass subclasses were delineated using airborne digital multispectral videography (DMSV). Eelgrass, Zostera marina, was the predominant seagrass and covered 40% (1949 ha) of the areal extent of the bay in 1999. Eelgrass grew over a wide range of tidal depths from about –3.0 m mean lower low water (MLLW) to about 1.0 m MLLW, but greatest spatial extent occurred in intertidal areas –0.6 m to 1.0 m MLLW. Exposed-continuous (i.e., high density) eelgrass was the most abundant habitat in the bay. Widgeongrass, Ruppia maritima, was the only other seagrass present and covered 3% (136 ha) of the areal extent of the entire bay. Widgeongrass grew in single species stands in the upper intertidal (≥ 0.4 MLLW) and intermixed with eelgrass at lower tidal depths. Overall accuracy of the six habitat classes and three subclasses in the DMSV map was relatively high at 84%. Our detailed map of San Quintín Bay can be used in future change detection analyses to monitor the health of seagrasses in the bay.

Evaluation of eelgrass beds mapping using a high-resolution airborne multispectral scanner

USGS Publications Warehouse

Su, H.; Karna, D.; Fraim, E.; Fitzgerald, M.; Dominguez, R.; Myers, J.S.; Coffland, B.; Handley, L.R.; Mace, T.

2006-01-01

Eelgrass (Zostera marina) can provide vital ecological functions in stabilizing sediments, influencing current dynamics, and contributing significant amounts of biomass to numerous food webs in coastal ecosystems. Mapping eelgrass beds is important for coastal water and nearshore estuarine monitoring, management, and planning. This study demonstrated the possible use of high spatial (approximately 5 m) and temporal (maximum low tide) resolution airborne multispectral scanner on mapping eelgrass beds in Northern Puget Sound, Washington. A combination of supervised and unsupervised classification approaches were performed on the multispectral scanner imagery. A normalized difference vegetation index (NDVI) derived from the red and near-infrared bands and ancillary spatial information, were used to extract and mask eelgrass beds and other submerged aquatic vegetation (SAV) in the study area. We evaluated the resulting thematic map (geocoded, classified image) against a conventional aerial photograph interpretation using 260 point locations randomly stratified over five defined classes from the thematic map. We achieved an overall accuracy of 92 percent with 0.92 Kappa Coefficient in the study area. This study demonstrates that the airborne multispectral scanner can be useful for mapping eelgrass beds in a local or regional scale, especially in regions for which optical remote sensing from space is constrained by climatic and tidal conditions. ?? 2006 American Society for Photogrammetry and Remote Sensing.

Seagrass vegetation and meiofauna enhance the bacterial abundance in the Baltic Sea sediments (Puck Bay).

PubMed

Jankowska, Emilia; Jankowska, Katarzyna; Włodarska-Kowalczuk, Maria

2015-09-01

This study presents the first report on bacterial communities in the sediments of eelgrass (Zostera marina) meadows in the shallow southern Baltic Sea (Puck Bay). Total bacterial cell numbers (TBNs) and bacteria biomass (BBM) assessed with the use of epifluorescence microscope and Norland's formula were compared between bare and vegetated sediments at two localities and in two sampling summer months. Significantly higher TBNs and BBM (PERMANOVA tests, P < 0.05) were recorded at bottom covered by the seagrass meadows in both localities and in both sampling months. The relationships between bacteria characteristics and environmental factors (grain size, organic matter, photopigments in sediments), meiofauna and macrofauna densities, as well as macrophyte vegetation characteristics (shoot density, phytobenthos biomass) were tested using PERMANOVA distance-based linear model (DISTLM) procedures and showed that the main factors explaining bacteria characteristics are bottom type (vegetated vs. unvegetated) and meiofauna density. These two factors explained together 48.3% of variability in TBN and 40.5% in BBM, and their impacts did not overlap (as indicated by DISTLM sequential tests) demonstrating the different natures of these relationships. The effects of seagrass were most probably related to the increase of organic matter and providing habitat while higher numbers of meiofauna organisms may have stimulated the bacterial growth by increased grazing.

Latitude, temperature, and habitat complexity predict predation pressure in eelgrass beds across the Northern Hemisphere.

PubMed

Reynolds, Pamela L; Stachowicz, John J; Hovel, Kevin; Boström, Christoffer; Boyer, Katharyn; Cusson, Mathieu; Eklöf, Johan S; Engel, Friederike G; Engelen, Aschwin H; Eriksson, Britas Klemens; Fodrie, F Joel; Griffin, John N; Hereu, Clara M; Hori, Masakazu; Hanley, Torrance C; Ivanov, Mikhail; Jorgensen, Pablo; Kruschel, Claudia; Lee, Kun-Seop; McGlathery, Karen; Moksnes, Per-Olav; Nakaoka, Masahiro; O'Connor, Mary I; O'Connor, Nessa E; Orth, Robert J; Rossi, Francesca; Ruesink, Jennifer; Sotka, Erik E; Thormar, Jonas; Tomas, Fiona; Unsworth, Richard K F; Whalen, Matthew A; Duffy, J Emmett

2018-01-01

Latitudinal gradients in species interactions are widely cited as potential causes or consequences of global patterns of biodiversity. However, mechanistic studies documenting changes in interactions across broad geographic ranges are limited. We surveyed predation intensity on common prey (live amphipods and gastropods) in communities of eelgrass (Zostera marina) at 48 sites across its Northern Hemisphere range, encompassing over 37° of latitude and four continental coastlines. Predation on amphipods declined with latitude on all coasts but declined more strongly along western ocean margins where temperature gradients are steeper. Whereas in situ water temperature at the time of the experiments was uncorrelated with predation, mean annual temperature strongly positively predicted predation, suggesting a more complex mechanism than simply increased metabolic activity at the time of predation. This large-scale biogeographic pattern was modified by local habitat characteristics; predation declined with higher shoot density both among and within sites. Predation rates on gastropods, by contrast, were uniformly low and varied little among sites. The high replication and geographic extent of our study not only provides additional evidence to support biogeographic variation in predation intensity, but also insight into the mechanisms that relate temperature and biogeographic gradients in species interactions. © 2017 by the Ecological Society of America.

Application of Focused Ultrasound-Assisted Extraction for the Quantification of Persistent Organic Pollutions in Liver Tissue of Giant Toad (Rhinella marina).

PubMed

Flores-Ramírez, R; Espinosa-Reyes, G; Cilia-López, V G; González-Mille, D J; Rodríguez-Aguilar, M; Díaz de León-Martínez, L; Díaz-Barriga, F

2017-02-01

A simple and rapid focused ultrasound extraction method was developed for the determination of Persistent Organic Pollutants (POPs) in liver tissue obtained of giant toad (Rhinella marina) using a gas chromatography coupled to a mass detector with electron impact ionization. The performed method for POPs, was validated in fortified matrix, showing linearity from the LOQ up to 100 ng/mL; LODs and LOQs for each compound were between 1.7 and 4.8 and 3.5-7.5 ng/mL, respectively. Recovery rates were among 79%-116% for POPs determined. Finally, the method was applied in liver samples of giant toads found in a malarial area in Mexico. The sensitivity of the proposed method was good enough to ensure reliable determination of target analytes at concentration levels commonly found in this kind of samples.

Ecology of an Eel Grass Community

ERIC Educational Resources Information Center

Etri, Lawrence

1978-01-01

Analyzing a square meter of a Zostera community on Long Island's South Shore, this article illustrates the relationship between primary energy producer and primary and secondary energy consumer populations within the Zostera community. Specific plant-animal relationships based upon knowledge of estuarine environments are discussed. (JC)

Impacts on the seagrass, Zostera nigricaulis, from the herbicide Fusilade Forte® used in the management of Spartina anglica infestations.

PubMed

Carve, Megan; Coggan, Timothy L; Myers, Jackie H; Clarke, Bradley; Nugegoda, Dayanthi; Shimeta, Jeff

2018-02-01

The herbicide Fusilade Forte ® (FF) is widely applied in agricultural weed management and in the management of the invasive saltmarsh grass, Spartina anglica (ricegrass or cordgrass). FF (active ingredient fluazifop-P acid, FPA) is selective for poaceous grasses. Its primary mode of action is inhibition of the acetyl coenzyme-A carboxylase (ACCase) specific to this taxonomic group, and its secondary mode is by promotion of oxidative stress. FF is applied to S. anglica infestations in the intertidal zone, in proximity to seagrass meadows. Despite the potential for vital seagrass ecosystems to be exposed to FF, there is limited knowledge of any potential impacts. We investigated impacts of FPA on the endemic Australian seagrass, Zostera nigricaulis, measuring ACCase activity and parameters that reflect oxidative stress: photosynthetic performance, lipid peroxidation and photosynthetic pigment content. Seagrass was exposed to FF (0.01-10mgL -1 FPA and a control) for 7d, followed by a 7-d recovery in uncontaminated seawater. An enzyme assay demonstrated that FPA ≤10mgL -1 did not inhibit the activity of ACCase isolated from Z. nigricaulis, demonstrating that this seagrass is resistant to FF's primary mode of action. However, physiological impacts occurred following 7 days exposure to ≥0.1mgL -1 FPA, including up to a 72% reduction in photosynthetic pigment concentration. After 7-d recovery, photosynthetic pigment content improved in treatment plants; however, treated plants exhibited higher levels of lipid peroxidation. This study demonstrates that while Z. nigricaulis is resistant to FF's primary mode of action, significant physiological impacts occur following 7 days exposure to ≥0.1mgL -1 FPA. This study provides valuable information on the effects of FF on a non-target species that can better inform approaches to Spartina management in coastal seagrass ecosystems. Copyright © 2017 Elsevier B.V. All rights reserved.

Temporal pattern in biometrics and nutrient stoichiometry of the intertidal seagrass Zostera japonica and its adaptation to air exposure in a temperate marine lagoon (China): Implications for restoration and management.

PubMed

Zhang, Xiaomei; Zhou, Yi; Liu, Peng; Wang, Feng; Liu, Bingjian; Liu, Xujia; Yang, Hongsheng

2015-05-15

In coastal areas of China, the seagrass Zostera japonica has drastically decreased in the past decades. Swan Lake is an exception, where we found extensive areas of Z. japonica beds. The growth of Z. japonica in the lagoon exhibited strong seasonal variation. The maximum shoot density of 9880±2786 shoots m(-2) occurred in August. The maximum specific growth rate (SGR) of 4.99±1.99%⋅d(-1) was recorded in June 2012. SGR might be a good parameter for assessing the growth status of Z. japonica population. N and P contents in the rhizome were significantly lower than those in the leaf and leaf sheath. Lower C/P ratios suggested P enrichment of the seagrass. The occurrence of Z. japonica in Swan Lake was featured by adapting to the intertidal harsh environments. The transplantation method using sectioned rhizomes would be a potential way for restoration of degraded Z. japonica beds. The establishment of the Rongcheng Swan National Nature Reserve in China has contributed to the survival and expansion of Z. japonica in Swan Lake. Copyright © 2015 Elsevier Ltd. All rights reserved.

Assessment of heavy metal and petroleum hydrocarbon contamination in the Sultanate of Oman with emphasis on harbours, marinas, terminals and ports.

PubMed

Jupp, Barry P; Fowler, Scott W; Dobretsov, Sergey; van der Wiele, Henk; Al-Ghafri, Ahmed

2017-08-15

The assessment here includes data on levels of contaminants (petroleum hydrocarbons and heavy metals) in sediments and biomonitor organisms, including the eulittoral rock oyster Saccostrea cucullata and subtidal biomonitors, the barnacle Balanus trigonus and the antipatharian coral Antipathes sp., at harbours, marinas, terminals and large ports along the coastline of Oman. TBT levels in harbour and port sediments up to a maximum of 100ppb TBT dry weight are highlighted. Oysters contained concentrations up to 367ppm mg TPH/kg dry weight. The maximum levels of Cd, Cu, Pb and Zn were found in the subtidal sediments and barnacles at the oil tanker loading Single Buoy Mooring stations in Mina Al Fahal. In general, the levels of most of the contaminants analysed are at low to moderate concentrations compared to those in highly contaminated sites such as shipyards and dry docks, but continued monitoring is recommended especially during any dredging campaigns. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effects of rearing environment and population origin on responses to repeated behavioural trials in cane toads (Rhinella marina).

PubMed

Gruber, Jodie; Whiting, Martin J; Brown, Gregory; Shine, Richard

2018-05-02

Behavioural response to repeated trials in captivity can be driven by many factors including rearing environment, population of origin, habituation to captivity/trial conditions and an individual's behavioural type (e.g., bold versus shy). We tested the effect of rearing environment (captive raised common-garden versus wild-caught) and population origin (range-edge versus range-front) on the responses of invasive cane toads (Rhinella marina) to repeated exploration and risk-taking assays in captivity. We found that behavioural responses to identical assays performed on two occasions were complex and showed few consistent patterns based on rearing environment or population of origin. However, behavioural traits were repeatable across Trial Blocks when all sample populations were grouped together, indicating general consistency in individual toad behaviour across repeated behavioural assays. Our findings exemplify the complexity and unpredictability of behavioural responses and their effects on the repeatability and interpretation of behavioural traits across repeated behavioural assays in captivity. To meaningfully interpret the results from repeated behavioural assays, we need to consider how multiple factors may affect behavioural responses to these tests and importantly, how these responses may affect the repeatability of behavioural traits across time. Copyright © 2018. Published by Elsevier B.V.

Toads on Lava: Spatial Ecology and Habitat Use of Invasive Cane Toads (Rhinella marina) in Hawai'i.

PubMed

Ward-Fear, Georgia; Greenlees, Matthew J; Shine, Richard

2016-01-01

Most ecological research on cane toads (Rhinella marina) has focused on invasive populations in Australia, ignoring other areas where toads have been introduced. We radio-tracked and spool-tracked 40 toads, from four populations on the island of Hawai'i. Toads moved extensively at night (mean 116 m, from spool-tracking) but returned to the same or a nearby retreat-site each day (from radio-tracking, mean distance between successive retreat sites 11 m; 0 m for 70% of records). Males followed straighter paths during nocturnal movements than did females. Because moist sites are scarce on the highly porous lava substrate, Hawai'ian toads depend on anthropogenic disturbance for shelter (e.g. beneath buildings), foraging (e.g. suburban lawns, golf courses) and breeding (artificial ponds). Foraging sites are further concentrated by a scarcity of flying insects (negating artificial lights as prey-attractors). Habitat use of toads shifted with time (at night, toads selected areas with less bare ground, canopy, understory and leaf-litter), and differed between sexes (females foraged in areas of bare ground with dense understory vegetation). Cane toads in Hawai'i thrive in scattered moist patches within a severely arid matrix, despite a scarcity of flying insects, testifying to the species' ability to exploit anthropogenic disturbance.

Toads on Lava: Spatial Ecology and Habitat Use of Invasive Cane Toads (Rhinella marina) in Hawai’i

PubMed Central

Ward-Fear, Georgia; Greenlees, Matthew J.; Shine, Richard

2016-01-01

Most ecological research on cane toads (Rhinella marina) has focused on invasive populations in Australia, ignoring other areas where toads have been introduced. We radio-tracked and spool-tracked 40 toads, from four populations on the island of Hawai’i. Toads moved extensively at night (mean 116 m, from spool-tracking) but returned to the same or a nearby retreat-site each day (from radio-tracking, mean distance between successive retreat sites 11 m; 0 m for 70% of records). Males followed straighter paths during nocturnal movements than did females. Because moist sites are scarce on the highly porous lava substrate, Hawai’ian toads depend on anthropogenic disturbance for shelter (e.g. beneath buildings), foraging (e.g. suburban lawns, golf courses) and breeding (artificial ponds). Foraging sites are further concentrated by a scarcity of flying insects (negating artificial lights as prey-attractors). Habitat use of toads shifted with time (at night, toads selected areas with less bare ground, canopy, understory and leaf-litter), and differed between sexes (females foraged in areas of bare ground with dense understory vegetation). Cane toads in Hawai’i thrive in scattered moist patches within a severely arid matrix, despite a scarcity of flying insects, testifying to the species’ ability to exploit anthropogenic disturbance. PMID:27027738

Meta-Analysis of Reciprocal Linkages between Temperate Seagrasses and Waterfowl with Implications for Conservation.

PubMed

Kollars, Nicole M; Henry, Amy K; Whalen, Matthew A; Boyer, Katharyn E; Cusson, Mathieu; Eklöf, Johan S; Hereu, Clara M; Jorgensen, Pablo; Kiriakopolos, Stephanie L; Reynolds, Pamela L; Tomas, Fiona; Turner, Mo S; Ruesink, Jennifer L

2017-01-01

Multi-trophic conservation and management strategies may be necessary if reciprocal linkages between primary producers and their consumers are strong. While herbivory on aquatic plants is well-studied, direct top-down control of seagrass populations has received comparatively little attention, particularly in temperate regions. Herein, we used qualitative and meta-analytic approaches to assess the scope and consequences of avian (primarily waterfowl) herbivory on temperate seagrasses of the genus Zostera . Meta-analyses revealed widespread evidence of spatio-temporal correlations between Zostera and waterfowl abundances as well as strong top-down effects of grazing on Zostera . We also documented the identity and diversity of avian species reported to consume Zostera and qualitatively assessed their potential to exert top-down control. Our results demonstrate that Zostera and their avian herbivores are ecologically linked and we suggest that bird herbivory may influence the spatial structure, composition, and functioning of the seagrass ecosystem. Therefore, the consequences of avian herbivory should be considered in the management of seagrass populations. Of particular concern are instances of seagrass overgrazing by waterfowl which result in long-term reductions in seagrass biomass or coverage, with subsequent impacts on local populations of waterfowl and other seagrass-affiliated species. While our results showed that bird density and type may affect the magnitude of the top-down effects of avian herbivory, empirical research on the strength, context-dependency, and indirect effects of waterfowl- Zostera interactions remains limited. For example, increased efforts that explicitly measure the effects of different functional groups of birds on seagrass abundance and/or document how climate change-driven shifts in waterfowl migratory patterns impact seagrass phenology and population structure will advance research programs for both ecologists and managers concerned

77 FR 31032 - National Institute on Aging; Notice of Closed Meetings

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-24

... applications. Place: Marina del Rey Hotel, 13534 Bali Way, Marina del Rey, CA 90292. Contact Person: Bita... applications. Place: Marina del Rey Hotel, 13534 Bali Way, Marina del Rey, CA 90292. Contact Person: Ramesh... and evaluate grant applications. Place: Marina del Rey Hotel, 13534 Bali Way, Marina del Rey, CA 90292...

Structure and vulnerability of Pacific Northwest tidal wetlands – A summary of wetland climate change research by the Western Ecology Division, U.S. EPA

USGS Publications Warehouse

Folger, Christina L; Lee, Henry; Janousek, Christopher N.; Reusser, Deborah A.

2014-01-01

Climate change poses a serious threat to the tidal wetlands of the Pacific Northwest (PNW) region of the U.S. In response to this threat, scientists at the Western Ecology Division of the U.S. EPA at and the Western Fisheries Research Center of the U.S. Geological Survey, along with other partners, initiated a series of studies on the structure and vulnerability of tidal wetlands to climate change. One research thrust was to evaluate community structure of PNW marshes, experimentally assess the vulnerability of marsh plants to inundation and salinity stress (as would happen with sea level rise), and evaluate the utility of the National Wetland Inventory (NWI) classification system. Another research thrust was to develop tools that provide insights into possible impacts of climate change. This effort included enhancing the Sea Level Affecting Marshes Model (SLAMM) to predict the effects of sea level rise on submerged aquatic vegetation (Zostera marina) distributions, evaluating changes in river flow into coastal estuaries in response to precipitation changes, and synthesizing Pacific Coast estuary, watershed, and climate data in a downloadable tool. Because the research resulting from these efforts was published in multiple venues, we summarized them in this document. We anticipate that future research efforts by the U.S. EPA will continue with a focus on climate change impacts on a regional scale.

Temporal dynamics of gastropod fauna on subtidal sandy sediments of the Ensenada de Baiona (NW Iberian Peninsula)

NASA Astrophysics Data System (ADS)

Moreira, J.; Aldea, C.; Troncoso, J. S.

2010-12-01

The temporal variation of the gastropod fauna inhabiting sandy sediments of the Ensenada de Baiona (Galicia, Spain) was studied at three subtidal sites from February 1996 to February 1997 by means of quantitative sampling. A total of 5,463 individuals representing 51 gastropod species and 22 families were found. The family Pyramidellidae was the most diverse in number of species (11 species), followed by Rissoidae and Trochidae (4 species each). The dogwhelk, Nassarius reticulatus, and the rissoid snail, Rissoa parva, were the numerically dominant species at the three studied sites; those and other abundant species showed their greatest densities by the end of summer and the beginning of autumn. In general, univariate measures of the assemblage (number of species, abundance, diversity and evenness) showed variations through time; greater values were recorded between summer and autumn depending on the site. Multivariate analyses done on abundance data showed certain seasonality in the evolution of the assemblage as expected for shallow subtidal sandy sediments at temperate latitudes; those seasonal changes were mostly related to variations in abundance of numerically dominant species. Although the measured sedimentary variables did not show significant correlations with faunal univariate parameters, sediment heterogeneity due to the presence of mats of Zostera marina L. and shells of dead bivalves might explain the differences in composition of the gastropod assemblage among sampling sites.

Comparative analysis of different survey methods for monitoring fish assemblages in coastal habitats.

PubMed

Baker, Duncan G L; Eddy, Tyler D; McIver, Reba; Schmidt, Allison L; Thériault, Marie-Hélène; Boudreau, Monica; Courtenay, Simon C; Lotze, Heike K

2016-01-01

Coastal ecosystems are among the most productive yet increasingly threatened marine ecosystems worldwide. Particularly vegetated habitats, such as eelgrass (Zostera marina) beds, play important roles in providing key spawning, nursery and foraging habitats for a wide range of fauna. To properly assess changes in coastal ecosystems and manage these critical habitats, it is essential to develop sound monitoring programs for foundation species and associated assemblages. Several survey methods exist, thus understanding how different methods perform is important for survey selection. We compared two common methods for surveying macrofaunal assemblages: beach seine netting and underwater visual census (UVC). We also tested whether assemblages in shallow nearshore habitats commonly sampled by beach seines are similar to those of nearby eelgrass beds often sampled by UVC. Among five estuaries along the Southern Gulf of St. Lawrence, Canada, our results suggest that the two survey methods yield comparable results for species richness, diversity and evenness, yet beach seines yield significantly higher abundance and different species composition. However, sampling nearshore assemblages does not represent those in eelgrass beds despite considerable overlap and close proximity. These results have important implications for how and where macrofaunal assemblages are monitored in coastal ecosystems. Ideally, multiple survey methods and locations should be combined to complement each other in assessing the entire assemblage and full range of changes in coastal ecosystems, thereby better informing coastal zone management.

Effects of Wood Pollution on Pore-Water Sulfide Levels and Eelgrass Germination

NASA Astrophysics Data System (ADS)

Ekelem, C.

2016-02-01

Historically, sawmills released wood waste onto coastal shorelines throughout the Pacific Northwest of the USA, enriching marine sediments with organic material. The increase in organic carbon boosts the bacterial reduction of sulfate and results in the production of a toxic metabolite, hydrogen sulfide. Hydrogen sulfide is a phytotoxin and can decrease the growth and survival of eelgrass. This is a critical issue since eelgrass, Zostera marina, forms habitat for many species, stabilizes sediment, and plays a role in nutrient cycling and sediment chemistry. The objective of our study was to determine the effects of wood debris on sediment pore-water hydrogen sulfide concentrations and eelgrass germination. To test the impact of wood inputs on sulfide production and seed germination, we conducted a laboratory mesocosm experiment, adding sawdust to marine sediments and measuring the sulfide levels weekly. We subsequently planted seeds in the mesocosms and measured germination rates. Higher concentrations of sawdust led to higher levels of pore-water hydrogen sulfide and drastically slower eelgrass germination rates. Treatments with greater than 10% wood enrichment developed free sulfide concentrations of 0.815 (± 0.427) mM after 118 days, suggesting sediments with greater than 10% wood pollution may have threateningly high pore-water hydrogen sulfide levels. These results can be used to set thresholds for remediation efforts and guide seed distribution in wood polluted areas.

Variable primary producer responses to nutrient and ...

EPA Pesticide Factsheets

Mesocosm experiments have been used to evaluate the impacts of nutrient loading on estuarine plant communities in order to develop nutrient response relationships. Mesocosm eutrophication studies tend to focus on long residence time systems. In the Pacific Northwest, many estuaries have high nutrient loads, short water residence times, seasonal macroalgal blooms, while intertidal seagrass meadows persist under what appear to be largely naturally-derived eutrophic conditions. Using experimental mesocosms, we examined how primary producer communities in rapidly flushed systems respond to a range of temperature (10 and 20 °C) and nutrient loads (ambient, 1.5, 3 and 6 x ambient). Thermal and nutrient loading regimes were maintained for three sets of 3 week-duration experiments during the summer of 2013. Statistical analysis was performed using an information criterion approach to evaluate the best fit model. Green macroalgal (GMA) growth and tissue N increased in response to nutrient loading. Irrespective of nutrient load, GMA at 10 °C remained intercalated among seagrass shoots, but at 20 °C formed floating mats that overtopped seagrass. Outgassing of O2 in combination with photosynthetic O2 production likely induced floating mat formation. No phytoplankton blooms were observed. Zostera japonica leaf biomass and C:N responded to temperature while other metrics exhibited no statistically significant difference. Z. marina growth, wasting disease, and morphological

Impacts of CO2 Enrichment on Productivity and Light Requirements of Eelgrass.

PubMed

Zimmerman, R. C.; Kohrs, D. G.; Steller, D. L.; Alberte, R. S.

1997-10-01

Seagrasses, although well adapted for submerged existence, are CO2-limited and photosynthetically inefficient in seawater. This leads to high light requirements for growth and survival and makes seagrasses vulnerable to light limitation. We explored the long-term impact of increased CO2 availability on light requirements, productivity, and C allocation in eelgrass (Zostera marina L.). Enrichment of seawater CO2 increased photosynthesis 3-fold, but had no long-term impact on respiration. By tripling the rate of light-saturated photosynthesis, CO2 enrichment reduced the daily period of irradiance-saturated photosynthesis (Hsat) that is required for the maintenance of positive whole-plant C balance from 7 to 2.7 h, allowing plants maintained under 4 h of Hsat to perform like plants growing in unenriched seawater with 12 h of Hsat. Eelgrass grown under 4 h of Hsat without added CO2 consumed internal C reserves as photosynthesis rates and chlorophyll levels dropped. Growth ceased after 30 d. Leaf photosynthesis, respiration, chlorophyll, and sucrose-phosphate synthase activity of CO2-enriched plants showed no acclimation to prolonged enrichment. Thus, the CO2-stimulated improvement in photosynthesis reduced light requirements in the long term, suggesting that globally increasing CO2 may enhance seagrass survival in eutrophic coastal waters, where populations have been devastated by algal proliferation and reduced water-column light transparency.

Long-term change in eelgrass distribution at Bahía San Quintín, Baja California, Mexico, using satellite imagery

USGS Publications Warehouse

Ward, David H.; Morton, Alexandra; Tibbitts, T. Lee; Douglas, David C.; Carrera-Gonzalez, Eduardo

2003-01-01

Seagrasses are critically important components of many marine coastal and estuarine ecosystems, but are declining worldwide. Spatial change in distribution of eelgrass, Zostera marina L., was assessed at Bahía San Quintín, Baja California, Mexico, using a map to map comparison of data interpreted from a 1987 Satellite Pour l'Observation de la Terre multispectral satellite image and a 2000 Landsat Enhanced Thematic Mapping image. Eelgrass comprised 49% and 43% of the areal extent of the bay in 1987 and 2000, respectively. Spatial extent of eelgrass was 13% less (-321 ha) in 2000 than in 1987 with most losses occurring in subtidal areas. Over the 13-yr study period, there was a 34% loss of submerged eelgrass (-457 ha) and a 13% (+136 ha) gain of intertidal eelgrass. Within the two types of intertidal eelgrass, the patchy cover class (<85% cover) expanded (+250 ha) and continuous cover class (≥85% cover) declined (-114 ha). Most eelgrass losses were likely the result of sediment loading and turbidity caused by a single flooding event in winter of 1992-1993. Recent large-scale agricultural development of adjacent uplands may have exacerbated the effects of the flood. Oyster farming was not associated with any detectable losses in eelgrass spatial extent, despite the increase in number of oyster racks from 57 to 484 over the study period.

Evaluation of four seagrass species as early warning indicators for nitrogen overloading: Implications for eutrophic evaluation and ecosystem management.

PubMed

Yang, Xiaolong; Zhang, Peidong; Li, Wentao; Hu, Chengye; Zhang, Xiumei; He, Pingguo

2018-04-23

Seagrasses are major coastal primary producers and are widely distributed on coasts worldwide. Seagrasses show sensitivity to environmental stress due to their high phenotypic plasticity, and therefore, we evaluated the use of constituent elements in four dominant seagrass species as early warning indicators for nitrogen eutrophication of coastal regions. A meta-analysis was conducted with published data to develop a global benchmark for the selected indicator, which was used to evaluate nitrogen loading at a global scale. A case study at three bays was subsequently conducted to test for local-scale differences in leaf C/N ratios in four seagrasses. Additionally, morphological and physiological metrics of seagrasses were measured from the three locations under varied nitrogen levels to develop further assessment indexes. The benchmark and local study showed that leaf C/N ratios of Zostera marina were sensitive to nitrogen discharge, which could be a highly valuable early warning indicator on a global scale. Moreover, the threshold value of seagrass leaf C/N was determined according to the benchmark to differentiate eutrophic and low nitrogen levels at a local scale. Of the eight phenotypic metrics measured, leaf width, total chlorophyll (a + b), chlorophyll ratio (a/b), and starch in the rhizome were the most effective at discriminating between the three locations and could also be promising indicators for monitoring eutrophication. Copyright © 2018. Published by Elsevier B.V.

Diurnal shifts in co-distributions of sulfide and iron(II) and profiles of phosphate and ammonium in the rhizosphere of Zostera capricorni

NASA Astrophysics Data System (ADS)

Pagès, Anaïs; Welsh, David T.; Robertson, David; Panther, Jared G.; Schäfer, Jörg; Tomlinson, Rodger B.; Teasdale, Peter R.

2012-12-01

High resolution, two dimensional distributions of porewater iron(II) and sulfide were measured, using colourimetric DET (diffusive equilibration in a thin film) and DGT (diffusive gradients in a thin film) techniques, respectively, in Zostera capricorni colonised sediments under both light and dark conditions. Low resolution depth profiles of ammonium and phosphate were measured using conventional DET and DGT methods, respectively. Porewater iron(II) and sulfide distributions showed a high degree of spatial heterogeneity under both light and dark conditions, and distributions were characterised by a complex mosaic of sediment zones dominated by either iron(II) or sulfide. However, there was a clear shift in overall redox conditions between light and dark conditions. During light deployments, iron(II) and sulfide concentrations were generally low throughout the rhizosphere, apart from a few distinct "hotspots" of high concentration. Whereas during dark deployments, high concentrations of iron(II) were sometimes measured in the near surface sediments and sulfide depth distributions migrated towards the sediment surface. Profiles of porewater ammonium and phosphate demonstrated an increase in ammonium concentrations under dark compared to light conditions. Surprisingly, despite the large changes in iron(II) distributions between light and dark conditions, phosphate profiles remained similar, indicating that adsorption/release of phosphate by iron(III) hydr(oxide) mineral formation and reduction was not a major factor regulating porewater phosphate concentrations in these sediments or that phosphate uptake by the seagrass roots persisted during the dark period. Overall, the results demonstrate that the photosynthetic activity of the seagrass played a significant role in regulating sulfide, iron(II) and ammonium concentrations in the rhizosphere, due to rates of radial oxygen loss and ammonium uptake by the roots and rhizomes being lower under dark compared to light

Urinary corticosterone metabolite responses to capture and captivity in the cane toad (Rhinella marina).

PubMed

Narayan, Edward J; Cockrem, John F; Hero, Jean-Marc

2011-09-01

Urinary corticosterone metabolite responses to capture have recently been shown for the first time in amphibians, and in the present study urinary corticosterone metabolite responses to capture and to confinement in captivity were measured in adult cane toads (Rhinella marina) in Queensland, Australia. An adrenocorticotropic hormone (ACTH) challenge was used to provide a biological validation for urinary corticosterone metabolite concentrations measured by radioimmunoassay (RIA). Urinary corticosterone metabolite increased 1-2 days after ACTH but not saline injection and then returned to initial values, indicating that the RIA could detect changes in corticosterone secretion in toads. Urinary corticosterone metabolite responses to short-term capture and restraint in plastic bags were first apparent 2h after capture of wild toads. Toads held communally in captivity for 5 days had elevated urinary corticosterone metabolite concentrations. Mean corticosterone concentrations declined significantly after a further 7 days in individual housing chambers. There was no sex difference in urinary corticosterone metabolite responses of toads to ACTH challenge, short-term capture or captivity. The relative amount of variation in the mean corticosterone responses was quantified by calculating coefficients of variation (CV) for each mean corticosterone response. Mean corticosterone at 0 min was more variable for captive toads than wild toads. Furthermore, initial corticosterone concentrations (0 min) were more variable than concentrations during the ACTH challenge, short-term capture and captivity. There was little change in the amount of variation of mean corticosterone levels between male and female toads with increasing time in captivity (12-29 days). This study has shown individual corticosterone responses of amphibians for the first-time, and has provided a novel method for quantifying the relative amount of variation in amphibian corticosterone responses. Copyright © 2011

Lanfrediella amphicirrus gen. nov. sp. nov. Nematotaeniidae (Cestoda: Cyclophyllidea), a tapeworm parasite of Rhinella marina (Linnaeus, 1758) (Amphibia: Bufonidae).

PubMed

Melo, Francisco Tiago de Vasconcelos; Giese, Elane Guerreiro; Furtado, Adriano Penha; Soares, Maurílio José; Gonçalves, Evonnildo Costa; Vallinoto, Antonio Carlos Rosário; Santos, Jeannie Nascimento dos

2011-09-01

The family Nematotaeniidae, tapeworms commonly found in the small intestines of amphibians and reptiles, includes 27 recognised species distributed among four genera: Bitegmen Jones, Cylindrotaenia Jewell, Distoichometra Dickey and Nematotaenia Lühe. The taxonomy of these cestodes is poorly defined, due in part to the difficulties of observing many anatomical traits. This study presents and describes a new genus and species of nematotaeniid parasite found in cane toads (Rhinella marina) from eastern Brazilian Amazonia. The cestodes were collected during the necropsy of 20 hosts captured in the urban area of Belém, Pará. The specimens were fixed and processed for light microscopy, scanning electron microscopy (SEM) and three-dimensional (3D) reconstruction. Samples were also collected for molecular analyses. The specimens presented a cylindrical body, two testes and paruterine organs. However, they could not be allocated to any of the four existing nematotaeniid genera due to the presence of two each of dorsal compact medullary testes, cirri, cirrus pouches, genital pores, ovaries and vitelline glands per mature segment. Lanfrediella amphicirrus gen. nov. sp. nov. is the first nematotaeniid studied using Historesin analysis, SEM and 3D reconstruction, and it is the second taxon for which molecular data have been deposited in GenBank.

Physiological and Morphological Responses of the Temperate Seagrass Zostera muelleri to Multiple Stressors: Investigating the Interactive Effects of Light and Temperature

PubMed Central

York, Paul H.; Gruber, Renee K.; Hill, Ross; Ralph, Peter J.; Booth, David J.; Macreadie, Peter I.

2013-01-01

Understanding how multiple environmental stressors interact to affect seagrass health (measured as morphological and physiological responses) is important for responding to global declines in seagrass populations. We investigated the interactive effects of temperature stress (24, 27, 30 and 32°C) and shading stress (75, 50, 25 and 0% shade treatments) on the seagrass Zostera muelleri over a 3-month period in laboratory mesocosms. Z. muelleri is widely distributed throughout the temperate and tropical waters of south and east coasts of Australia, and is regarded as a regionally significant species. Optimal growth was observed at 27°C, whereas rapid loss of living shoots and leaf mass occurred at 32°C. We found no difference in the concentration of photosynthetic pigments among temperature treatments by the end of the experiment; however, up-regulation of photoprotective pigments was observed at 30°C. Greater levels of shade resulting in high photochemical efficiencies, while elevated irradiance suppressed effective quantum yield (ΔF/FM’). Chlorophyll fluorescence fast induction curves (FIC) revealed that the J step amplitude was significantly higher in the 0% shade treatment after 8 weeks, indicating a closure of PSII reaction centres, which likely contributed to the decline in ΔF/FM’ and photoinhibition under higher irradiance. Effective quantum yield of PSII (ΔF/FM’) declined steadily in 32°C treatments, indicating thermal damage. Higher temperatures (30°C) resulted in reduced above-ground biomass ratio and smaller leaves, while reduced light led to a reduction in leaf and shoot density, above-ground biomass ratio, shoot biomass and an increase in leaf senescence. Surprisingly, light and temperature had few interactive effects on seagrass health, even though these two stressors had strong effects on seagrass health when tested in isolation. In summary, these results demonstrate that populations of Z. muelleri in south-eastern Australia are sensitive

Physiological and morphological responses of the temperate seagrass Zostera muelleri to multiple stressors: investigating the interactive effects of light and temperature.

PubMed

York, Paul H; Gruber, Renee K; Hill, Ross; Ralph, Peter J; Booth, David J; Macreadie, Peter I

2013-01-01

Understanding how multiple environmental stressors interact to affect seagrass health (measured as morphological and physiological responses) is important for responding to global declines in seagrass populations. We investigated the interactive effects of temperature stress (24, 27, 30 and 32°C) and shading stress (75, 50, 25 and 0% shade treatments) on the seagrass Zostera muelleri over a 3-month period in laboratory mesocosms. Z. muelleri is widely distributed throughout the temperate and tropical waters of south and east coasts of Australia, and is regarded as a regionally significant species. Optimal growth was observed at 27°C, whereas rapid loss of living shoots and leaf mass occurred at 32°C. We found no difference in the concentration of photosynthetic pigments among temperature treatments by the end of the experiment; however, up-regulation of photoprotective pigments was observed at 30°C. Greater levels of shade resulting in high photochemical efficiencies, while elevated irradiance suppressed effective quantum yield (ΔF/FM'). Chlorophyll fluorescence fast induction curves (FIC) revealed that the J step amplitude was significantly higher in the 0% shade treatment after 8 weeks, indicating a closure of PSII reaction centres, which likely contributed to the decline in ΔF/FM' and photoinhibition under higher irradiance. Effective quantum yield of PSII (ΔF/FM') declined steadily in 32°C treatments, indicating thermal damage. Higher temperatures (30°C) resulted in reduced above-ground biomass ratio and smaller leaves, while reduced light led to a reduction in leaf and shoot density, above-ground biomass ratio, shoot biomass and an increase in leaf senescence. Surprisingly, light and temperature had few interactive effects on seagrass health, even though these two stressors had strong effects on seagrass health when tested in isolation. In summary, these results demonstrate that populations of Z. muelleri in south-eastern Australia are sensitive to

Rhizosphere of Avicennia marina (Forsk.) Vierh. as a landmark for polythene degrading bacteria.

PubMed

Shahnawaz, Mohd; Sangale, Manisha K; Ade, Avinash B

2016-07-01

Due to high durability, cheap cost, and ease of manufacture, 311 million tons of plastic-based products are manufactured around the globe per annum. The slow/least rate of plastic degradation leads to generation of million tons of plastic waste per annum, which is of great environmental concern. Of the total plastic waste generated, polythene shared about 64 %. Various methods are available in the literature to tackle with the plastic waste, and biodegradation is considered as the most accepted, eco-friendly, and cost-effective method of polythene waste disposal. In the present study, an attempt has been made to isolate, screen, and characterize the most efficient polythene degrading bacteria by using rhizosphere soil of Avicennia marina as a landmark. From 12 localities along the west coast of India, a total of 123 bacterial isolates were recorded. Maximum percent weight loss (% WL; 21.87 ± 6.37 %) was recorded with VASB14 at pH 3.5 after 2 months of shaking at room temperature. Maximum percent weight gain (13.87 ± 3.6 %) was reported with MANGB5 at pH 7. Maximum percent loss in tensile strength (% loss in TS; 87.50 ± 4.8 %) was documented with VASB1 at pH 9.5. The results based on the % loss in TS were only reproducible. Further, the level of degradation was confirmed by scanning electron microscopic (SEM) and Fourier transform infrared spectroscopy (FTIR) analysis. In SEM analysis, scions/crakes were found on the surface of the degraded polythene, and mass of bacterial cell was also recorded on the weight-gained polythene strips. Maximum reduction in carbonyl index (4.14 %) was recorded in untreated polythene strip with Lysinibacillus fusiformis strain VASB14/WL. Based on 16S ribosomal RNA (rRNA) gene sequence homology, the most efficient polythene degrading bacteria were identified as L. fusiformis strainVASB14/WL and Bacillus cereus strain VASB1/TS.

Riverine Carbon and the Sedimentary Record on the Continental Shelves

DTIC Science & Technology

2003-09-30

Geologia Marina (formerly Istituto di Geologia Marina) Consiglio Nazionale delle Ricerche Via Gobetti, 101 40129 Bologna, Italy phone: +39 (051...ORGANIZATION NAME(S) AND ADDRESS(ES) Istituto Scienze Marine, Sezione Geologia Marina,(formerly Istituto di Geologia Marina),Consiglio Nazionale delle

Atlantic brant--human commensalism on eelgrass beds in New Jersey

USGS Publications Warehouse

Kirby, R.E.; Obrecht, H.H.

1980-01-01

Atlantic Brant Branta bernicla hrota in Barnegat Bay, New Jersey, have established a commensal feeding relationship with man. Small flocks feed 3-5 m from clam fishermen on Zostera torn from the sea bottom by the fishing activities. Background material on the availability and digestibility of different brant foods is presented. This commensalism gives the Brant an efficient food gathering opportunity and permits them to exploit Zostera which might otherwise be unavailable to them.

The Effect of Microplastic on the Uptake of Chemicals by the Lugworm Arenicola marina (L.) under Environmentally Relevant Exposure Conditions

PubMed Central

2017-01-01

It has been hypothesized that ingestion of microplastic increases exposure of aquatic organisms to hydrophobic contaminants. To date, most laboratory studies investigated chemical transfer from ingested microplastic without taking other exposure pathways into account. Therefore, we studied the effect of polyethylene (PE) microplastic in sediment on PCB uptake by Arenicola marina as a model species, quantifying uptake fluxes from all natural exposure pathways. PCB concentrations in sediment, biota lipids (Clip) and porewater measured with passive samplers were used to derive lipid-normalized bioaccumulation metrics Clip, Biota sediment accumulation factor (BSAF), Bioaccumulation factor (BAF) and the Biota plastic accumulation factor (BPAF). Small effects of PE addition were detected suggesting slightly increased or decreased bioaccumulation. However, the differences decreased in magnitude dependent on the metric used to assess bioaccumulation, in the order: Clip > BSAF > BPAF > BAF, and were nonsignificant for BAF. The fact that BAF, that is, normalization of Clip on porewater concentration, largely removed all effects of PE, shows that PE did not act as a measurable vector of PCBs. Biodynamic model analysis confirmed that PE ingestion contributed marginally to bioaccumulation. This work confirmed model-based predictions on the limited relevance of microplastic for bioaccumulation under environmentally realistic conditions, and illustrated the importance of assessing exposure through all media in microplastic bioaccumulation studies. PMID:28682597

Volcanic ash deposition, eelgrass beds, and inshore habitat loss from the 1920s to the 1990s at Chignik, Alaska

NASA Astrophysics Data System (ADS)

Zimmermann, Mark; Ruggerone, Gregory T.; Freymueller, Jeffrey T.; Kinsman, Nicole; Ward, David H.; Hogrefe, Kyle R.

2018-03-01

We quantified the shallowing of the seafloor in five of six bays examined in the Chignik region of the Alaska Peninsula, confirming National Ocean Service observations that 1990s hydrographic surveys were shallower than previous surveys from the 1920s. Castle Bay, Chignik Lagoon, Hook Bay, Kujulik Bay and Mud Bay lost volume as calculated from Mean Lower Low Water (Chart Datum) to the deepest depths and four of these sites lost volume from Mean High Water to the deepest depths. Calculations relative to each datum were made because tidal datum records exhibited an increase in tidal range in this region from the 1920s to the 1990s. Our analysis showed that Mud Bay is quickly disappearing while Chignik Lagoon is being reduced to narrow channels. Anchorage Bay was the only site that increased in depth over time, perhaps due to erosion. Volcanoes dominate the landscape of the Chignik area. They have blanketed the region in deep ash deposits before the time frame of this study, and some have had smaller ash-producing eruptions during the time frame of this study. Remobilization of land-deposited ash and redeposition in marine areas - in some locations facilitated by extensive eelgrass (Zostera marina) beds (covering 54% of Chignik Lagoon and 68% of Mud Bay in 2010) - is the most likely cause of shallowing in the marine environment. Loss of shallow water marine habitat may alter future abundance and distribution of several fish, invertebrate and avian species.

Mapping of Submerged Aquatic Vegetation Using Autonomous Underwater Vehicles in Nearshore Regions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jones, Mark E.; Miller, Lee M.; Woodruff, Dana L.

2007-10-02

The use of an autonomous underwater vehicle (AUV) equipped with sidescan sonar was investigated for determining the boundaries of nearshore submerged aquatic vegetation beds, specifically eelgrass (Zostera marina). Shifts in eelgrass bed morphology, size, and distribution are used as indicators in monitoring programs to measure the impacts of coastal development and environmental stressors on eelgrass and to establish the efficacy of restoration programs. However, many monitoring programs necessarily extend over multiple-year time periods. Therefore, techniques that are easily reproducible, accurate, and cost-effective can demonstrate distinct advantages over some of the more traditional and labor-intensive methods, such as diver assessments andmore » transects of shoot counts. Remote monitoring of eelgrass beds using satellite and aerial imagery has been demonstrated with moderate success, but requires groundtruthing, which can be costly and which frequently cannot delineate the deeper boundaries of eelgrass beds. One possible means for low-cost mapping is the use of AUVs equipped with acoustic imaging hardware. AUVs provide an ideal platform, because they can be deployed by small teams (two people), they are highly maneuverable, they can cover large areas over a relatively short time period (3knot operational speed), and they are equipped with multiple oceanographic instruments for correlated data collection. This paper describes the use of sidescan-equipped AUV technology deployed over multiple time periods at the same location where imagery of eelgrass beds was obtained and analyzed for comparative purposes.« less

Relative abundance, age, growth, and fecundity of grubby Myoxocephalus aenaeus in Niantic River and Niantic Bay, Long Island Sound

USGS Publications Warehouse

Roseman, E.F.; Tomichek, C.A.; Maynard, T.; Burton, J.A.

2005-01-01

Grubby (Myoxocephalus aenaeus, Cottidae) is a common benthic fish of inshore waters and estuaries of eastern Long Island Sound; however, little information exists on their life history or population demographics. This study utilised a long-term data series (1976-2002) to assess grubby life history and population demographics and explores trends in the Niantic River and Niantic Bay populations. In addition, we examined the age, size, and fecundity of adult grubby in 2001-02 to determine the population characteristics in the region. Mean grubby catch per unit effort (CPUE) in Niantic Bay ranged from 0.4 per trawl in 1976 to 2.9 per trawl in 1984 while river CPUE ranged from 0.4 per trawl in 1977 to 7.6 per trawl in 1989. Catch of grubby in bottom trawls varied seasonally with highest CPUE occurring in winter. Highest entrainment of grubby larvae occurred in 2001 while the lowest entrainment observed was in 1991. Four age classes, 0+ through III+, were derived from otolith analysis (N = 51) although length frequency analysis suggested the possibility of older fish in the population. The total number of eggs in ovaries ranged from 286 to 16 451 for grubby (N = 64) between 52 mm and 155 mm TL. Results of this study indicated a decline in abundance of adult grubby over the 26-year period, possibly related to concurrent declines in eelgrass (Zostera marina) abundance and/or increased water temperature. ?? 2005 Elsevier B.V. All rights reserved.

Relative abundance, age, growth, and fecundity of grubby Myoxocephalus aenaeus in Niantic River and Niantic Bay, Long Island Sound

NASA Astrophysics Data System (ADS)

Roseman, Edward F.; Tomichek, Christine A.; Maynard, Tracy; Burton, Jennifer A.

2005-04-01

Grubby ( Myoxocephalus aenaeus, Cottidae) is a common benthic fish of inshore waters and estuaries of eastern Long Island Sound; however, little information exists on their life history or population demographics. This study utilised a long-term data series (1976-2002) to assess grubby life history and population demographics and explores trends in the Niantic River and Niantic Bay populations. In addition, we examined the age, size, and fecundity of adult grubby in 2001-02 to determine the population characteristics in the region. Mean grubby catch per unit effort (CPUE) in Niantic Bay ranged from 0.4 per trawl in 1976 to 2.9 per trawl in 1984 while river CPUE ranged from 0.4 per trawl in 1977 to 7.6 per trawl in 1989. Catch of grubby in bottom trawls varied seasonally with highest CPUE occurring in winter. Highest entrainment of grubby larvae occurred in 2001 while the lowest entrainment observed was in 1991. Four age classes, 0+ through III+, were derived from otolith analysis (N = 51) although length frequency analysis suggested the possibility of older fish in the population. The total number of eggs in ovaries ranged from 286 to 16 451 for grubby (N = 64) between 52 mm and 155 mm TL. Results of this study indicated a decline in abundance of adult grubby over the 26-year period, possibly related to concurrent declines in eelgrass ( Zostera marina) abundance and/or increased water temperature.

Contribution of different functional groups to the diet of major predatory fishes at a seagrass meadow in northeastern Japan

NASA Astrophysics Data System (ADS)

Yamada, Katsumasa; Hori, Masakazu; Tanaka, Yoshiyuki; Hasegawa, Natsuki; Nakaoka, Masahiro

2010-01-01

We examined the variation in habitat use and diet of three dominant fish species ( Myoxocephalus brandti, Pholidapus dybowskii, and Pholis crassispina) in a seagrass meadow in the Akkeshi-ko estuary in northeastern Japan, where broad and dense Zostera marina beds exist, using a semi-quantitative census of the fishes and analyses of their stomach contents. Differences among the three fish species in the temporal variation in abundance of each age class (mainly 1- and 2-year age classes) indicated that the temporal pattern of utilization of the seagrass meadow were different among them. In the semi-quantitative dietary analysis, two prey categories, i.e., taxonomic group (order and suborder) and functional group, were used to explain the variation in prey composition with size-dependent changes. The six prey functional groups were classified based on the ecological traits of the prey, i.e., trophic level, size, and life type (habitat and behavior). Ontogenetic shifts in prey of the three fish species could be fully explained by a combination of the two prey categories, and not by the use of only one category (taxonomic or functional group). The pattern of ontogenetic shifts in prey differed among the fish species and size (age) classes. These results indicate that segregation of habitat (seagrass meadow) and prey group (taxonomic and functional group) is performed among the three species, which may contribute to their coexistence in this estuary.

Apiose and mono-O-methyl sugars as minor constituents of the leaves of deciduous trees and various other species.

PubMed

Bacon, J S; Cheshire, M V

1971-09-01

1. Leaves of a number of species were hydrolysed with aqueous sulphuric acid and the resulting mixtures of sugars were fractionated by chromatography on activated charcoal. Paper chromatography of the fractions showed the presence in all the hydrolysates of minor constituents with R(F) values similar to or greater than those of the common hexoses and pentoses. 2. Two of these were identified as 2-O-methylxylose and 2-O-methylfucose. Estimates of the amounts present in whole leaves, and in fractions prepared from them, showed that they were associated with the hemicelluloses. 3. A third constituent was identified, by the formation of its di-isopropylidene derivative, as apiose. It also was associated chiefly with the hemicellulose fraction; none could be found in aqueous extracts from leaves of Tilia vulgaris, nor in aqueous extracts of Zostera marina, in which apiose is a major constituent of the water-insoluble polysaccharide. 4. A further constituent, after further purification by preparative paper chromatography, was tentatively identified, by gas-liquid chromatography of derivatives, as 3-O-methylgalactose, and was probably accompanied by small amounts of 4-O-methylgalactose. 5. These observations confirm the widespread occurrence of 2-O-methylxylose, 2-O-methylfucose and apiose, but 3-O-methylgalactose was hitherto known only in slippery-elm mucilage, and 4-O-methylgalactose in soil polysaccharides. Some experiments on the digestion of leaf hemicellulose fractions by snail crop-juice suggested that the mono-O-methyl sugars might confer resistance to enzymic degradation.

Apiose and mono-O-methyl sugars as minor constituents of the leaves of deciduous trees and various other species

PubMed Central

Bacon, J. S. D.; Cheshire, M. V.

1971-01-01

1. Leaves of a number of species were hydrolysed with aqueous sulphuric acid and the resulting mixtures of sugars were fractionated by chromatography on activated charcoal. Paper chromatography of the fractions showed the presence in all the hydrolysates of minor constituents with RF values similar to or greater than those of the common hexoses and pentoses. 2. Two of these were identified as 2-O-methylxylose and 2-O-methylfucose. Estimates of the amounts present in whole leaves, and in fractions prepared from them, showed that they were associated with the hemicelluloses. 3. A third constituent was identified, by the formation of its di-isopropylidene derivative, as apiose. It also was associated chiefly with the hemicellulose fraction; none could be found in aqueous extracts from leaves of Tilia vulgaris, nor in aqueous extracts of Zostera marina, in which apiose is a major constituent of the water-insoluble polysaccharide. 4. A further constituent, after further purification by preparative paper chromatography, was tentatively identified, by gas–liquid chromatography of derivatives, as 3-O-methylgalactose, and was probably accompanied by small amounts of 4-O-methylgalactose. 5. These observations confirm the widespread occurrence of 2-O-methylxylose, 2-O-methylfucose and apiose, but 3-O-methylgalactose was hitherto known only in slippery-elm mucilage, and 4-O-methylgalactose in soil polysaccharides. Some experiments on the digestion of leaf hemicellulose fractions by snail crop-juice suggested that the mono-O-methyl sugars might confer resistance to enzymic degradation. PMID:5135242

Comparing automated classification and digitization approaches to detect change in eelgrass bed extent during restoration of a large river delta

USGS Publications Warehouse

Davenport, Anna Elizabeth; Davis, Jerry D.; Woo, Isa; Grossman, Eric; Barham, Jesse B.; Ellings, Christopher S.; Takekawa, John Y.

2017-01-01

Native eelgrass (Zostera marina) is an important contributor to ecosystem services that supplies cover for juvenile fish, supports a variety of invertebrate prey resources for fish and waterbirds, provides substrate for herring roe consumed by numerous fish and birds, helps stabilize sediment, and sequesters organic carbon. Seagrasses are in decline globally, and monitoring changes in their growth and extent is increasingly valuable to determine impacts from large-scale estuarine restoration and inform blue carbon mapping initiatives. Thus, we examined the efficacy of two remote sensing mapping methods with high-resolution (0.5 m pixel size) color near infrared imagery with ground validation to assess change following major tidal marsh restoration. Automated classification of false color aerial imagery and digitized polygons documented a slight decline in eelgrass area directly after restoration followed by an increase two years later. Classification of sparse and low to medium density eelgrass was confounded in areas with algal cover, however large dense patches of eelgrass were well delineated. Automated classification of aerial imagery from unsupervised and supervised methods provided reasonable accuracies of 73% and hand-digitizing polygons from the same imagery yielded similar results. Visual clues for hand digitizing from the high-resolution imagery provided as reliable a map of dense eelgrass extent as automated image classification. We found that automated classification had no advantages over manual digitization particularly because of the limitations of detecting eelgrass with only three bands of imagery and near infrared.

Macrophyte Community Response to Nitrogen Loading and ...

EPA Pesticide Factsheets

Empirical determination of nutrient loading thresholds that negatively impact seagrass communities have been elusive due to the multitude of factors involved. Using a mesocosm system that simulated Pacific Northwest estuaries, we evaluated macrophyte metrics across gradients of NO3 loading (0, 1.5, 3 and 6x ambient) and temperature (10 and 20 °C). Macroalgal growth, biomass, and C:N responded positively to increased NO3 load and floating algal mats developed at 20 ºC. Zostera japonica metrics, including C:N, responded more to temperature than to NO3 loading. Z. marina biomass exhibited a negative temperature effect and in some cases a negative NO3 effect, while growth rate increased with temperature. Shoot survival decreased at 20 ºC but was not influenced by NO3 loading. Wasting disease index exhibited a significant temperature by NO3 interaction consistent with increased disease susceptibility. Community shifts observed were consistent with the nutrient loading hypothesis at 20 ºC, but there was no evidence of other eutrophication symptoms due to the short residence time. The Nutrient Pollution Index tracked the NO3 gradient at 10 ºC but exhibited no response at 20 ºC. We suggest that systems characterized by cool temperatures, high NO3 loads, and short residence time may be resilient to many symptoms of eutrophication. Estuarine systems characterized by cool temperatures, high nutrient loads and rapid flushing may be resilient to some symptoms

Temporal shifts in top-down vs. bottom-up control of epiphytic algae in a seagrass ecosystem

USGS Publications Warehouse

Whalen, Matthew A.; Duffy, J. Emmett; Grace, James B.

2013-01-01

In coastal marine food webs, small invertebrate herbivores (mesograzers) have long been hypothesized to occupy an important position facilitating dominance of habitat-forming macrophytes by grazing competitively superior epiphytic algae. Because of the difficulty of manipulating mesograzers in the field, however, their impacts on community organization have rarely been rigorously documented. Understanding mesograzer impacts has taken on increased urgency in seagrass systems due to declines in seagrasses globally, caused in part by widespread eutrophication favoring seagrass overgrowth by faster-growing algae. Using cage-free field experiments in two seasons (fall and summer), we present experimental confirmation that mesograzer reduction and nutrients can promote blooms of epiphytic algae growing on eelgrass (Zostera marina). In this study, nutrient additions increased epiphytes only in the fall following natural decline of mesograzers. In the summer, experimental mesograzer reduction stimulated a 447% increase in epiphytes, appearing to exacerbate seasonal dieback of eelgrass. Using structural equation modeling, we illuminate the temporal dynamics of complex interactions between macrophytes, mesograzers, and epiphytes in the summer experiment. An unexpected result emerged from investigating the interaction network: drift macroalgae indirectly reduced epiphytes by providing structure for mesograzers, suggesting that the net effect of macroalgae on seagrass depends on macroalgal density. Our results show that mesograzers can control proliferation of epiphytic algae, that top-down and bottom-up forcing are temporally variable, and that the presence of macroalgae can strengthen top-down control of epiphytic algae, potentially contributing to eelgrass persistence.

Faunal Communities Are Invariant to Fragmentation in Experimental Seagrass Landscapes

PubMed Central

Marion, Scott R.; Lombana, Alfonso V.; Orth, Robert J.

2016-01-01

Human-driven habitat fragmentation is cited as one of the most pressing threats facing many coastal ecosystems today. Many experiments have explored the consequences of fragmentation on fauna in one foundational habitat, seagrass beds, but have either surveyed along a gradient of existing patchiness, used artificial materials to mimic a natural bed, or sampled over short timescales. Here, we describe faunal responses to constructed fragmented landscapes varying from 4–400 m2 in two transplant garden experiments incorporating live eelgrass (Zostera marina L.). In experiments replicated within two subestuaries of the Chesapeake Bay, USA across multiple seasons and non-consecutive years, we comprehensively censused mesopredators and epifaunal communities using complementary quantitative methods. We found that community properties, including abundance, species richness, Simpson and functional diversity, and composition were generally unaffected by the number of patches and the size of the landscape, or the intensity of sampling. Additionally, an index of competition based on species co-occurrences revealed no trends with increasing patch size, contrary to theoretical predictions. We extend conclusions concerning the invariance of animal communities to habitat fragmentation from small-scale observational surveys and artificial experiments to experiments conducted with actual living plants and at more realistic scales. Our findings are likely a consequence of the rapid life histories and high mobility of the organisms common to eelgrass beds, and have implications for both conservation and restoration, suggesting that even small patches can rapidly promote abundant and diverse faunal communities. PMID:27244652

Faunal Communities Are Invariant to Fragmentation in Experimental Seagrass Landscapes.

PubMed

Lefcheck, Jonathan S; Marion, Scott R; Lombana, Alfonso V; Orth, Robert J

2016-01-01

Human-driven habitat fragmentation is cited as one of the most pressing threats facing many coastal ecosystems today. Many experiments have explored the consequences of fragmentation on fauna in one foundational habitat, seagrass beds, but have either surveyed along a gradient of existing patchiness, used artificial materials to mimic a natural bed, or sampled over short timescales. Here, we describe faunal responses to constructed fragmented landscapes varying from 4-400 m2 in two transplant garden experiments incorporating live eelgrass (Zostera marina L.). In experiments replicated within two subestuaries of the Chesapeake Bay, USA across multiple seasons and non-consecutive years, we comprehensively censused mesopredators and epifaunal communities using complementary quantitative methods. We found that community properties, including abundance, species richness, Simpson and functional diversity, and composition were generally unaffected by the number of patches and the size of the landscape, or the intensity of sampling. Additionally, an index of competition based on species co-occurrences revealed no trends with increasing patch size, contrary to theoretical predictions. We extend conclusions concerning the invariance of animal communities to habitat fragmentation from small-scale observational surveys and artificial experiments to experiments conducted with actual living plants and at more realistic scales. Our findings are likely a consequence of the rapid life histories and high mobility of the organisms common to eelgrass beds, and have implications for both conservation and restoration, suggesting that even small patches can rapidly promote abundant and diverse faunal communities.

On the profile evolution of three artificial pebble beaches at Marina di Pisa, Italy

NASA Astrophysics Data System (ADS)

Bertoni, Duccio; Sarti, Giovanni

2011-07-01

In this paper, the profiles of three artificial coarse-grained beaches located at Marina di Pisa (Tuscany, Italy) were monitored from April 2008 to May 2009 in order to define the response of the beaches to major storms that occurred during the study. Two beaches are similar, the third differs in length and in the level of protection, being less than half the length of the others and devoid of an offshore submerged breakwater. The work was achieved by means of accurate topographic surveys intended to reconstruct the beach profile from the backshore up to the foreshore-upper shoreface transition (step). The surveys were performed with an RTK-GPS instrument, which provided extremely precise recording of the beach. The most significant features of the beaches were tracked during each survey; in particular, the landward foot of the storm berm, the crest of the storm berm, the coastline, and the step crest were monitored. Five cross-shore transects were traced on each beach. Along these transects, any meaningful slope change was recorded to obtain accurate sections of the beach. The field datasets were processed with AutoCAD software to compare the beach profile evolution during the year-long research. The results showed a comparable evolution of the twin beaches: the resulting storm berm retreat of about 15 to 19 m is a remarkable feature considering the coarse grain size and the offshore protection. Due to the absence of the breakwater, the third beach was characterized by even higher values of recession (over 20 m), and showed hints of wave reflection-related processes after the huge, steep storm berm had been formed and grown after the high energy events. These processes were not as evident on the twin beaches. These results underline the different response of three similar protection schemes, and the importance that frequent monitoring of the beach morphology holds when it comes to coastal management issues.

Roberts Bank: Ecological crucible of the Fraser River estuary

NASA Astrophysics Data System (ADS)

Sutherland, Terri F.; Elner, Robert W.; O'Neill, Jennifer D.

2013-08-01

Roberts Bank, part of the Fraser River delta system on Canada's Pacific coast, is a dynamic estuarine environment supporting important fisheries as well as internationally significant populations of migratory shorebirds. The 8000 ha bank environment comprises a complex of riparian boundaries, intertidal marshes, mud and sand flats, eelgrass meadows, macroalgae and biofilms. Anthropogenic developments (a ferry causeway in 1961 and a port causeway in 1969) have been responsible for changes in tidal flow patterns, tidal elevation, sediment transport and the net expansion of eelgrass beds. The goals of the present study were to (1) directly compare geotechnical properties spanning each side of the coalport causeway, and (2) enhance our understanding of the intercauseway ecosystem under a high-resolution sampling design. Sediment properties (grain size, porosity, organic content, and chlorophyll) and biological communities (eelgrass, macrofauna (0.5-1.0 mm) and meiofauna (0.063-0.5 mm)) were surveyed in 1997 at three stations outside the intercauseway area and three lateral transects spanning the intercauseway tidal flat at tidal heights representing three different habitats: biofilm, Zostera japonica, and Zostera marina. A fine-silt organic-rich porous deposit was observed on the shoreward north side of the coalport causeway relative to the south counterpart, suggesting that consolidation and erosion processes could likely not keep pace with the deposition of Fraser River silt. High chlorophyll levels were found in the protected shoreward northern border of the ferry causeway where fine sands dominate and higher water transparency exists, owing to the redirection of the silt-laden river plume by the coalport causeway. Principle Components Analysis revealed a positive relationship between these porous, organic-rich sediments and cumacean abundance in all regions where eelgrass was absent, including the north side of the coalport causeway. Further, a positive

Oysters and eelgrass: potential partners in a high pCO2 ocean.

PubMed

Groner, Maya L; Burge, Colleen A; Cox, Ruth; Rivlin, Natalie; Turner, Mo; Van Alstyne, Kathryn L; Wyllie-Echeverria, Sandy; Bucci, John; Staudigel, Philip; Friedman, Carolyn S

2018-05-25

Climate change is affecting the health and physiology of marine organisms and altering species interactions. Ocean acidification (OA) threatens calcifying organisms such as the Pacific oyster, Crassostrea gigas. In contrast, seagrasses, such as the eelgrass Zostera marina, can benefit from the increase in available carbon for photosynthesis found at a lower seawater pH. Seagrasses can remove dissolved inorganic carbon from OA environments, creating local daytime pH refugia. Pacific oysters may improve the health of eelgrass by filtering out pathogens such as Labyrinthula zosterae (LZ), which causes eelgrass wasting disease (EWD). We examined how co-culture of eelgrass ramets and juvenile oysters affected the health and growth of eelgrass and the mass of oysters under different pCO 2 exposures. In Phase I, each species was cultured alone or in co-culture at 12°C across ambient, medium, and high pCO 2 conditions, (656, 1158 and1606 μatm pCO 2 , respectively). Under high pCO 2 , eelgrass grew faster and had less severe EWD (contracted in the field prior to the experiment). Co-culture with oysters also reduced the severity of EWD. While the presence of eelgrass decreased daytime pCO 2 , this reduction was not substantial enough to ameliorate the negative impact of high pCO 2 on oyster mass. In Phase II, eelgrass alone or oysters and eelgrass in co-culture were held at 15°C under ambient and high pCO 2 conditions, (488 and 2013 μatm pCO 2 , respectively). Half of the replicates were challenged with cultured LZ. Concentrations of defensive compounds in eelgrass (total phenolics and tannins), were altered by LZ exposure and pCO 2 treatments. Greater pathogen loads and increased EWD severity were detected in LZ exposed eelgrass ramets; EWD severity was reduced at high relative to low pCO 2 . Oyster presence did not influence pathogen load or EWD severity; high LZ concentrations in experimental treatments may have masked the effect of this treatment. Collectively, these

Riverine Carbon and the Sedimentary Record on the Continental Shelves

DTIC Science & Technology

2004-09-30

Riverine Carbon and the Sedimentary Record on the Continental Shelves Stefano Miserocchi Istituto Scienze Marine, Sezione Geologia Marina...formerly Istituto di Geologia Marina) Consiglio Nazionale delle Ricerche Via Gobetti, 101 40129 Bologna, Italy phone: +39 (051) 6398880 Fax. +39 (051... Geologia Marina,,(formerly Istituto di Geologia Marina),Consiglio Nazionale delle Ricerche,,Via Gobetti, 101,40129 Bologna, Italy, , 8. PERFORMING

The Effect of Microplastic on the Uptake of Chemicals by the Lugworm Arenicola marina (L.) under Environmentally Relevant Exposure Conditions.

PubMed

Besseling, Ellen; Foekema, Edwin M; van den Heuvel-Greve, Martine J; Koelmans, Albert A

2017-08-01

It has been hypothesized that ingestion of microplastic increases exposure of aquatic organisms to hydrophobic contaminants. To date, most laboratory studies investigated chemical transfer from ingested microplastic without taking other exposure pathways into account. Therefore, we studied the effect of polyethylene (PE) microplastic in sediment on PCB uptake by Arenicola marina as a model species, quantifying uptake fluxes from all natural exposure pathways. PCB concentrations in sediment, biota lipids (C lip ) and porewater measured with passive samplers were used to derive lipid-normalized bioaccumulation metrics C lip , Biota sediment accumulation factor (BSAF), Bioaccumulation factor (BAF) and the Biota plastic accumulation factor (BPAF). Small effects of PE addition were detected suggesting slightly increased or decreased bioaccumulation. However, the differences decreased in magnitude dependent on the metric used to assess bioaccumulation, in the order: C lip > BSAF > BPAF > BAF, and were nonsignificant for BAF. The fact that BAF, that is, normalization of C lip on porewater concentration, largely removed all effects of PE, shows that PE did not act as a measurable vector of PCBs. Biodynamic model analysis confirmed that PE ingestion contributed marginally to bioaccumulation. This work confirmed model-based predictions on the limited relevance of microplastic for bioaccumulation under environmentally realistic conditions, and illustrated the importance of assessing exposure through all media in microplastic bioaccumulation studies.

Strategy Handbook for Recreational Small Boat Harbor Financing,

DTIC Science & Technology

1988-01-01

County Planning & North Point Marina Zoning Committee State of Illinois Sonoma County . CA o William A. Jansen, P.E., Proj. Dir. o Joseph D. Rodota...Director North Point Marina Sonoma County Regional Parks Office of Planning & Development o Ernie Carpenter, Chairman Dept. of Conservation Sonoma ...Spud Point Marina, Sonoma County , California; and Miami Beach Marina, Miami Beach, Florida. Findings from these studies were used to identify

Assessment of the labile fractions of copper and zinc in marinas and port areas in Southern Brazil.

PubMed

Costa, Luiza Dy Fonseca; Wallner-Kersanach, Mônica

2013-08-01

The dissolved labile and labile particulate fractions (LPF) of Cu and Zn were analyzed during different seasons and salinity conditions in estuarine waters of marina, port, and shipyard areas in the southern region of the Patos Lagoon (RS, Brazil). The dissolved labile concentration was determined using the diffusive gradients in thin films technique (DGT). DGT devices were deployed in seven locations of the estuary for 72 h and the physicochemical parameters were also measured. The LPF of Cu and Zn was determined by daily filtering of water samples. Seasonal variation of DGT-Cu concentrations was only significant (p < 0.05) at one shipyard area, while DGT-Zn was significant (p < 0.05) in every locations. The LPF of Cu and Zn concentrations demonstrated seasonal and spatial variability in all locations, mainly at shipyard areas during high salinity conditions. In general, except the control location, the sampling locations showed mean variations of 0.11-0.45 μg L(-1) for DGT-Cu, 0.89-9.96 μg L(-1) for DGT-Zn, 0.65-3.69 μg g(-1) for LPF-Cu, and 1.35-10.87 μg g(-1) for LPF-Zn. Shipyard areas demonstrated the most expressive values of labile Cu and Zn in both fractions. Strong relationship between DGT-Zn and LPF-Zn was found suggesting that the DGT-Zn fraction originates from the suspended particulate matter. Water salinity and suspended particulate matter content indicated their importance for the control of the labile concentrations of Cu and Zn in the water column. These parameters must be taken into consideration for comparison among labile metals in estuaries.

Material exchange and food web of seagrass beds in the Sylt-Rømø Bight: how significant are community changes at the ecosystem level?

NASA Astrophysics Data System (ADS)

Asmus, H.; Asmus, R.

2000-07-01

Material exchange, biodiversity and trophic transfer within the food web were investigated in two different types of intertidal seagrass beds: a sheltered, dense Zostera marina bed and a more exposed, sparse Z. noltii bed, in the Northern Wadden Sea. Both types of Zostera beds show a seasonal development of above-ground biomass, and therefore measurements were carried out during the vegetation period in summer. The exchange of particles and nutrients between seagrass beds and the overlying water was measured directly using an in situ flume. Particle sedimentation [carbon (C), nitrogen (N) and phosphorus (P) constituents] from the water column prevailed in dense seagrass beds. In the sheltered, dense seagrass bed, a net particle uptake was found even on windy days (7-8 Beaufort). Dissolved inorganic N and orthophosphate were mainly taken up by the dense seagrass bed. At times of strong winds, nutrients were released from the benthic community to tidal waters. In a budget calculation of total N and total P, the dense seagrass beds were characterised as a material sink. The seagrass beds with sparse Z. noltii were a source of particles even during calm weather. The uptake of dissolved inorganic N in the sparse seagrass bed was low but significant, while the uptake of inorganic phosphate and silicate by seagrasses and their epiphytes was exceeded by release processes from the sediment into the overlying water. Estimates at the ecosystem level showed that material fluxes of seagrass beds in the Sylt-Rømø Bight are dominated by the dense type of Zostera beds. Therefore, seagrass beds act as a sink for particles and for dissolved inorganic nutrients. During storms, seagrass beds are distinct sources for inorganic nutrients. The total intertidal area of the Sylt-Rømø Bight could be described as a sink for particles and a source for dissolved nutrients. This balance of the material budget was estimated by either including or excluding seagrass beds. Including the

Competition and pesticide exposure affect development of invasive (Rhinella marina) and native (Fejervarya vittigera) rice paddy amphibian larvae.

PubMed

Shuman-Goodier, Molly E; Singleton, Grant R; Propper, Catherine R

2017-12-01

Increased pesticide use in rice agricultural ecosystems may alter competitive interactions between invasive and native amphibian species. We conducted an experiment with two rice paddy amphibians found in Luzon, Philippines, the invasive cane toad (Rhinella marina) and the endemic Luzon wart frog (Fejervarya vittigera), to determine whether exposure to a common herbicide, butachlor, drives competitive interactions in favor of the invasive amphibian. Our results revealed that competition had a strong effect on the development of both species, but in opposing directions; Luzon wart frog tadpoles were smaller and developed slower than when raised alone, whereas cane toad tadpoles were larger and developed faster. Contrary to our predictions, development and survival of endemic wart frog tadpoles was not affected by butachlor, whereas invasive cane toad tadpoles were affected across several endpoints including gene expression, body size, and survival. We also observed an interaction between pesticide exposure and competition for the cane toad, where survival declined but body size and expression of thyroid sensitive genes increased. Taken together, our findings indicate that the success of the cane toad larvae in rice fields may be best explained by increased rates of development and larger body sizes of tadpoles in response to competition with native Luzon wart frog tadpoles rather than lower sensitivity to a common pesticide. Our results for the cane toad also provide evidence that butachlor can disrupt thyroid hormone mediated development in amphibians, and further demonstrate that important species interactions such as competition can be affected by pesticide exposure in aquatic ecosystems.

Vitamin A values of wild-caught Cuban tree frogs (Osteopilus septentrionalis) and marine toads (Rhinella marina) in whole body, liver, and serum.

PubMed

Sullivan, Kathleen E; Fleming, Greg; Terrell, Scott; Smith, Dustin; Ridgley, Frank; Valdes, Eduardo V

2014-12-01

Recent issues surrounding captive amphibians are often nutritionally related problems, such as hypovitaminosis A. Although supplementation of frogs with vitamin A is a topic of investigation, the underlying issue is understanding vitamin A metabolism in amphibian species. To develop a range of "normal" vitamin A concentrations for captive amphibians, baseline vitamin A concentrations must be established in wild amphibian species. In this study, two species, Cuban tree frogs (Osteopilus septentrionalis; n = 59) and marine toads (Rhinella marina; n = 20) were collected from the wild as part of an invasive species control program at Zoo Miami, Miami, Florida. Serum, liver, and whole body samples were analyzed for vitamin A content. The Cuban tree frogs showed higher concentrations on average of vitamin A in serum (82.8 ppb), liver (248.3 IU/g), and whole body (5474.7 IU/kg) samples compared with marine toads (60.1 ppb; 105.3 IU/g; 940.7 IU/kg, respectively), but differences were not significant (P = 0.22). What can be considered "normal" values of vitamin A concentrations across different amphibian species requires further investigation. Although all amphibians collected in this study appeared healthy, a larger sample size of animals, with known health histories and diets, may provide stronger evidence of normal expectations.

Soil and Rhizosphere Associated Fungi in Gray Mangroves (Avicennia marina) from the Red Sea--A Metagenomic Approach.

PubMed

Simões, Marta Filipa; Antunes, André; Ottoni, Cristiane A; Amini, Mohammad Shoaib; Alam, Intikhab; Alzubaidy, Hanin; Mokhtar, Noor-Azlin; Archer, John A C; Bajic, Vladimir B

2015-10-01

Covering a quarter of the world's tropical coastlines and being one of the most threatened ecosystems, mangroves are among the major sources of terrestrial organic matter to oceans and harbor a wide microbial diversity. In order to protect, restore, and better understand these ecosystems, researchers have extensively studied their microbiology, yet few surveys have focused on their fungal communities. Our lack of knowledge is even more pronounced for specific fungal populations, such as the ones associated with the rhizosphere. Likewise, the Red Sea gray mangroves (Avicennia marina) remain poorly characterized, and understanding of their fungal communities still relies on cultivation-dependent methods. In this study, we analyzed metagenomic datasets from gray mangrove rhizosphere and bulk soil samples collected in the Red Sea coast, to obtain a snapshot of their fungal communities. Our data indicated that Ascomycota was the dominant phylum (76%-85%), while Basidiomycota was less abundant (14%-24%), yet present in higher numbers than usually reported for such environments. Fungal communities were more stable within the rhizosphere than within the bulk soil, both at class and genus level. This finding is consistent with the intrinsic patchiness in soil sediments and with the selection of specific microbial communities by plant roots. Our study indicates the presence of several species on this mycobiome that were not previously reported as mangrove-associated. In particular, we detected representatives of several commercially-used fungi, e.g., producers of secreted cellulases and anaerobic producers of cellulosomes. These results represent additional insights into the fungal community of the gray mangroves of the Red Sea, and show that they are significantly richer than previously reported. Copyright © 2015 The Authors. Production and hosting by Elsevier Ltd.. All rights reserved.

Multiple dimensions of intraspecific diversity affect biomass of eelgrass and its associated community.

PubMed

Abbott, Jessica M; Grosberg, Richard K; Williams, Susan L; Stachowicz, John J

2017-12-01

Genetic diversity within key species can play an important role in the functioning of entire communities. However, the extent to which different dimensions of diversity (e.g., the number of genotypes vs. the extent of genetic differentiation among those genotypes) best predicts functioning is unknown and may yield clues into the different mechanisms underlying diversity effects. We explicitly test the relative influence of genotypic richness and genetic relatedness on eelgrass productivity, biomass, and the diversity of associated invertebrate grazers in a factorial field experiment using the seagrass species, Zostera marina (eelgrass). Genotypic richness had the strongest effect on eelgrass biomass accumulation, such that plots with more genotypes at the end of the experiment attained a higher biomass. Genotypic diversity (richness + evenness) was a stronger predictor of biomass than richness alone, and both genotype richness and diversity were positively correlated with trait diversity. The relatedness of genotypes in a plot reduced eelgrass biomass independently of richness. Plots containing eelgrass with greater trait diversity also had a higher abundance of invertebrate grazers, while the diversity and relatedness of eelgrass genotypes had little effect on invertebrate abundance or richness. Our work extends previous findings by explicitly relating genotypic diversity to trait diversity, thus mechanistically connecting genotypic diversity to plot-level yields. We also show that other dimensions of diversity, namely relatedness, influence eelgrass performance independent of trait differentiation. Ultimately, richness and relatedness captured fundamentally different components of intraspecific variation and should be treated as complementary rather than competing dimensions of biodiversity affecting ecosystem functioning. © 2017 by the Ecological Society of America.

Disturbance facilitates the coexistence of antagonistic ecosystem engineers in California estuaries.

PubMed

Castorani, Max C N; Hovel, Kevin A; Williams, Susan L; Baskett, Marissa L

2014-08-01

Ecological theory predicts that interactions between antagonistic ecosystem engineers can lead to local competitive exclusion, but disturbance can facilitate broader coexistence. However, few empirical studies have tested the potential for disturbance to mediate competition between engineers. We examined the capacity for disturbance and habitat modification to explain the disjunct distributions of two benthic ecosystem engineers, eelgrass Zostera marina and the burrowing ghost shrimp Neotrypaea californiensis, in two California estuaries. Sediment sampling in eelgrass and ghost shrimp patches revealed that ghost shrimp change benthic biogeochemistry over small scales (centimeters) but not patch scales (meters to tens of meters), suggesting a limited capacity for sediment modification to explain species distributions. To determine the relative competitive abilities of engineers, we conducted reciprocal transplantations of ghost shrimp and eelgrass. Local ghost shrimp densities declined rapidly following the addition of eelgrass, and transplanted eelgrass expanded laterally into the surrounding ghost shrimp-dominated areas. When transplanted into eelgrass patches, ghost shrimp failed to persist. Ghost shrimp were also displaced from plots with structural mimics of eelgrass rhizomes and roots, suggesting that autogenic habitat modification by eelgrass is an important mechanism determining ghost shrimp distributions. However, ghost shrimp were able to rapidly colonize experimental disturbances to eelgrass patch edges, which are common in shallow estuaries. We conclude that coexistence in this system is maintained by spatiotemporally asynchronous disturbances and a competition-colonization trade-off: eelgrass is a competitively superior ecosystem engineer, but benthic disturbances permit the coexistence of ghost shrimp at the landscape scale by modulating the availability of space.

The mute swan, its status, behavior, and history in the U. K

USGS Publications Warehouse

Lohnes, E.J.R.; Perry, Matthew C.

2004-01-01

For many years the mute swan has been considered a royal bird. It is a prominent resident throughout the United Kingdom (U.K.), often found on the inland waterways. Some people consider it to be a nonmigratory native bird because it doesn't tend to move large distances and doesn't often venture far from freshwater. A mute swan may often live out its life cycle in the same river valley in which it hatched. Over the last 30-40 years, a large amount of research has been carried out on their life cycle, behavior, and mortality caused by such factors as lead poisoning from fishing weights. Throughout the U.K., there are a number of areas where mute swans may be found in large numbers, including (1) the River Thames (which passes through London), (2) Slimbridge Wetlands Center, (3) Berwick-upon- Tweed (the second largest mute swan colony in Britain), and (4) Abbotsbury Swannery (the worlds only managed swan colony). This last site is a truly unique area, and each year it often has over 150 nesting pairs producing between 2-12 eggs per nest. The management is minimal, and the site is ideal for their requirements because it is close to a number of freshwater sources, and has good nesting sites and large quantities of eelgrass Zostera marina and widgeon grass Ruppia maritima, their preferred food sources. The Swannery is located on the south coast of England at the western end of the Fleet Lagoon, a micro-tidal estuary, which borders the English Channel.

Wrack patches and their influence on upper-shore macrofaunal abundance in an Atlantic Canada sandy beach system

NASA Astrophysics Data System (ADS)

MacMillan, Mitchell R.; Quijón, Pedro A.

2012-08-01

Patches of stranded macrophytes (wrack) are a distinctive feature of sandy beaches worldwide and a potential food subsidy for their resident communities. Despite their relevance, the spatial variation of wrack and its potential influence on upper shore beach organisms remain poorly understood. Wrack and macrofauna were surveyed on seven sandy beaches associated with dunes, till bluffs and sandstone cliffs along the north shore of Prince Edward Island, Atlantic Canada. Wrack patch density, cover, and water content were measured, and their associated macrofauna was compared to the communities inhabiting nearby bare sediments. The survey found among-site spatial differences in wrack characteristics and identified rockweeds (Fucus serratus) and eelgrass (Zostera marina) as the main macrophyte species in the area. Macrofaunal abundances were higher in wrack than in bare sediments but this varied among locations. A field manipulation was then conducted at two sandy beaches to measure macrofauna colonization on patches of fresh and aged rockweed and eelgrass. Regardless of macrophyte's age, macrofaunal organisms preferentially colonized sediments associated with rockweeds. In addition, calculations across treatments detected positive relationships between macrofaunal abundance and wet mass, dry mass and water content of the wrack patches, regardless of macrophyte species or state. Macrophyte preferences were further explored by comparing the nutritional value of the plant tissues and assessing macrofauna feeding rates under laboratory conditions. Rockweed tissues had consistently higher protein, lipid and carbohydrate contents than eelgrass and were affected by higher invertebrate consumption rates. Overall, these results suggest that spatial variation and wrack features and species composition play key roles on the structure of the supralittoral macrofauna.

Trace element exposure of whooper swans (Cygnus cygnus) wintering in a marine lagoon (Swan Lake), northern China.

PubMed

Wang, Feng; Xu, Shaochun; Zhou, Yi; Wang, Pengmei; Zhang, Xiaomei

2017-06-30

Trace element poisoning remains a great threat to various waterfowl and waterbirds throughout the world. In this study, we determined the trace element exposure of herbivorous whooper swans (Cygnus cygnus) wintering in Swan Lake (Rongcheng), an important swan protection area in northern China. A total of 70 samples including abiotic factors (seawater, sediments), food sources (seagrass, macroalgae), feathers and feces of whooper swans were collected from the marine lagoon during the winters of 2014/2015 and 2015/2016. Concentrations of Cu, Zn, Pb, Cr, Cd, Hg and As were determined to investigate the trace element exposure of whooper swans wintering in the area. Results showed that there was an increasing trend in sediment trace element concentrations, compared with historical data. The trace element concentrations in swan feces most closely resembled those of Zostera marina leaves, especially for Cd and Cr. The Zn and Hg concentrations in the swan feces (49.57 and 0.01mg/kg, respectively) were lower than the minimum values reported in the literature for other waterfowls, waterbirds and terrestrial birds. However, the concentrations of the other five trace elements fell within the lower and mediate range of values reported for birds across the world. These results suggest that the whooper swans wintering in Swan Lake, Rongcheng are not suffering severe trace element exposure; however, with the increasing input of trace elements to the lagoon, severe adverse impacts may occur in the future, and we therefore suggest that the input of trace elements to this area should be curbed. Copyright © 2017 Elsevier Ltd. All rights reserved.

Increasing Naval Security Cooperation between the U.S., Chile and Peru

DTIC Science & Technology

2009-03-01

del Mar: La Marina de Guerra en la historia del Perú (Lima: Marina de Guerra del Perú, 1994), 184. 108 Ibid., 188. 109 Ibid., 191-193. 42 “the...La Marina de Guerra en la historia del Perú, 205. 111 Ibid. 112 Ibid., 210. 113 Ibid., 229. 114 Ibid., 230. 115 Ibid., 246. 43 contributed to...la Puente Brunke, Los Hombres del Mar: La Marina de Guerra en la historia del Perú, 252. 117 Ibid., 264. 118 Ibid., 302. 119 Ibid., 342. 44

Long-term effects of mechanical harvesting of lugworms Arenicola marina on the zoobenthic community of a tidal flat in the Wadden Sea

NASA Astrophysics Data System (ADS)

Beukema, J. J.

More than half of the annual catch of about 30 million lugworms Arenicola marina from the Dutch Wadden Sea originates from digging machines which make 40-cm deep guilles in a few restricted tidal-flat areas (Texel, Balgzand) in the westernmost part of the Wadden Sea. Four successive years (1978-1982) of frequent disturbance by a lugworm dredge of one of the 15 sampling stations involved in a long-term study of the dynamics of the macrozoobenthos on Balgzand allowed a study of long-term effects of mechanical lugworm digging. Within an area of about 1 km 2, a near-doubling of the annual lugworm mortality rate resulted in a gradual and substantial decline of the local lugworm stock from more than twice the overall Balgzand mean at the start of the 4-year digging period to a value close to this mean at the end of the period (when the dredge moved to a richer area). Simultaneously, total zoobenthic biomass declined even more by the almost complete extinction of the population of larger gaper clams Mya arenaria that initially comprised half of the total biomass. Of the other, mostly short-lived, species only Heteromastus filiformis showed a clear reduction during the dredging period. Recovery of the biomass of the benthos took several years, particularly by the slow re-establishment of a Mya population with a normal size and age structure.

Differences in benthic fauna and sediment among mangrove ( Avicennia marina var. australasica) stands of different ages in New Zealand

NASA Astrophysics Data System (ADS)

Morrisey, D. J.; Skilleter, G. A.; Ellis, J. I.; Burns, B. R.; Kemp, C. E.; Burt, K.

2003-03-01

Management of coastal environments requires understanding of ecological relationships among different habitats and their biotas. Changes in abundance and distribution of mangroves, like those of other coastal habitats, have generally been interpreted in terms of changes in biodiversity or fisheries resources within individual stands. In several parts of their range, anthropogenically increased inputs of sediment to estuaries have led to the spread of mangroves. There is, however, little information on the relative ecological properties, or conservational values, of stands of different ages. The faunal, floral and sedimentological properties of mangrove ( Avicennia marina var. australasica) stands of two different ages in New Zealand has been compared. Older (>60 years) and younger (3-12 years) stands showed clear separation on the basis of environmental characteristics and benthic macrofauna. Numbers of faunal taxa were generally larger at younger sites, and numbers of individuals of several taxa were also larger at these sites. The total number of individuals was not different between the two age-classes, largely due to the presence of large numbers of the surface-living gastropod Potamopyrgus antipodarum at the older sites. It is hypothesized that as mangrove stands mature, the focus of faunal diversity may shift from the benthos to animals living on the mangrove plants themselves, such as insects and spiders, though these were not included in the present study. Differences in the faunas were coincident with differences in the nature of the sediment. Sediments in older stands were more compacted and contained more organic matter and leaf litter. Measurement of leaf chemistry suggested that mangrove plants in the younger stands were able to take up more N and P than those in the older stands.

A Patchy Growth via Successive and Simultaneous Cambia: Key to Success of the Most Widespread Mangrove Species Avicennia marina?

PubMed Central

Schmitz, Nele; Robert, Elisabeth M. R.; Verheyden, Anouk; Kairo, James Gitundu; Beeckman, Hans; Koedam, Nico

2008-01-01

Background and Aims Secondary growth via successive cambia has been intriguing researchers for decades. Insight into the mechanism of growth layer formation is, however, limited to the cellular level. The present study aims to clarify secondary growth via successive cambia in the mangrove species Avicennia marina on a macroscopic level, addressing the formation of the growth layer network as a whole. In addition, previously suggested effects of salinity on growth layer formation were reconsidered. Methods A 1-year cambial marking experiment was performed on 80 trees from eight sites in two mangrove forests in Kenya. Environmental (soil water salinity and nutrients, soil texture, inundation frequency) and tree characteristics (diameter, height, leaf area index) were recorded for each site. Both groups of variables were analysed in relation to annual number of growth layers, annual radial increment and average growth layer width of stem discs. Key Results Between trees of the same site, the number of growth layers formed during the 1-year study period varied from only part of a growth layer up to four growth layers, and was highly correlated to the corresponding radial increment (0–5 mm year–1), even along the different sides of asymmetric stem discs. The radial increment was unrelated to salinity, but the growth layer width decreased with increasing salinity and decreasing tree height. Conclusions A patchy growth mechanism was proposed, with an optimal growth at distinct moments in time at different positions around the stem circumference. This strategy creates the opportunity to form several growth layers simultaneously, as observed in 14 % of the studied trees, which may optimize tree growth under favourable conditions. Strong evidence was provided for a mainly endogenous trigger controlling cambium differentiation, with an additional influence of current environmental conditions in a trade-off between hydraulic efficiency and mechanical stability. PMID

Effects of El Niño on distribution and reproductive performance of Black Brant

USGS Publications Warehouse

Sedinger, James S.; Ward, David H.; Schamber, Jason L.; Butler, William I.; Eldridge, William D.; Conant, Bruce; Voelzer, James F.; Chelgren, Nathan; Herzog, Mark P.

2006-01-01

Climate in low-latitude wintering areas may influence temperate and high-latitude breeding populations of birds, but demonstrations of such relationships have been rare because of difficulties in linking wintering with breeding populations. We used long-term aerial surveys in Mexican wintering areas and breeding areas in Alaska, USA, to assess numbers of Black Brant (Branta bernicla nigricans; hereafter brant) on their principal wintering and breeding area in El Niño and non-El Niño years. We used Pollock's robust design to directly estimate probability of breeding and apparent annual survival of individually marked brant at the Tutakoke River (TR) colony, Alaska, in each year between 1988 and 2001. Fewer brant wintered in Mexico during every El Niño event since 1965. Fewer brant were observed on the principal breeding area following each El Niño since surveys began in 1985. Probability of breeding was negatively related to January sea surface temperature along the subtropical coast of North America during the preceding winter. Between 23% (five-year-olds or older) and 30% (three-year-olds) fewer brant nested in 1998 following the strong El Niño event in the winter of 1997–1998 than in non-El Niño years. This finding is consistent with life history theory, which predicts that longer-lived species preserve adult survival at the expense of reproduction. Oceanographic conditions off Baja California, apparently by their effect on Zostera marina (eelgrass), strongly influence winter distribution of brant geese and their reproduction (but not survival), which in turn affects ecosystem dynamics in Alaska.

Spectral wave dissipation by submerged aquatic vegetation in a back-barrier estuary

USGS Publications Warehouse

Nowacki, Daniel J.; Beudin, Alexis; Ganju, Neil K.

2017-01-01

Submerged aquatic vegetation is generally thought to attenuate waves, but this interaction remains poorly characterized in shallow-water field settings with locally generated wind waves. Better quantification of wave–vegetation interaction can provide insight to morphodynamic changes in a variety of environments and also is relevant to the planning of nature-based coastal protection measures. Toward that end, an instrumented transect was deployed across a Zostera marina (common eelgrass) meadow in Chincoteague Bay, Maryland/Virginia, U.S.A., to characterize wind-wave transformation within the vegetated region. Field observations revealed wave-height reduction, wave-period transformation, and wave-energy dissipation with distance into the meadow, and the data informed and calibrated a spectral wave model of the study area. The field observations and model results agreed well when local wind forcing and vegetation-induced drag were included in the model, either explicitly as rigid vegetation elements or implicitly as large bed-roughness values. Mean modeled parameters were similar for both the explicit and implicit approaches, but the spectral performance of the explicit approach was poor compared to the implicit approach. The explicit approach over-predicted low-frequency energy within the meadow because the vegetation scheme determines dissipation using mean wavenumber and frequency, in contrast to the bed-friction formulations, which dissipate energy in a variable fashion across frequency bands. Regardless of the vegetation scheme used, vegetation was the most important component of wave dissipation within much of the study area. These results help to quantify the influence of submerged aquatic vegetation on wave dynamics in future model parameterizations, field efforts, and coastal-protection measures.

The influence of current speed and vegetation density on flow structure in two macrotidal eelgrass canopies

USGS Publications Warehouse

Lacy, Jessica R.; Wyllie-Echeverria, Sandy

2011-01-01

The influence of eelgrass (Zostera marina) on near-bed currents, turbulence, and drag was investigated at three sites in two eelgrass canopies of differing density and at one unvegetated site in the San Juan archipelago of Puget Sound, Washington, USA. Eelgrass blade length exceeded 1 m. Velocity profiles up to 1.5 m above the sea floor were collected over a spring-neap tidal cycle with a downward-looking pulse-coherent acoustic Doppler profiler above the canopies and two acoustic Doppler velocimeters within the canopies. The eelgrass attenuated currents by a minimum of 40%, and by more than 70% at the most densely vegetated site. Attenuation decreased with increasing current speed. The data were compared to the shear-layer model of vegetated flows and the displaced logarithmic model. Velocity profiles outside the meadows were logarithmic. Within the canopies, most profiles were consistent with the shear-layer model, with a logarithmic layer above the canopy. However, at the less-dense sites, when currents were strong, shear at the sea floor and above the canopy was significant relative to shear at the top of the canopy, and the velocity profiles more closely resembled those in a rough-wall boundary layer. Turbulence was strong at the canopy top and decreased with height. Friction velocity at the canopy top was 1.5–2 times greater than at the unvegetated, sandy site. The coefficient of drag CD on the overlying flow derived from the logarithmic velocity profile above the canopy, was 3–8 times greater than at the unvegetated site (0.01–0.023 vs. 2.9 × 10−3).

Structuring factors and recent changes in subtidal macrozoobenthic communities of a coastal lagoon, Arcachon Bay (France)

NASA Astrophysics Data System (ADS)

Blanchet, Hugues; de Montaudouin, Xavier; Chardy, Pierre; Bachelet, Guy

2005-09-01

Fourteen years after a previous investigation in Arcachon Bay (SW France), the quantitative distribution of subtidal macrozoobenthic communities was assessed in 2002 through a stratified sampling strategy involving a larger number of stations (89 vs. 18) than in 1988. A total of 226 taxa were recorded. Cluster Analysis and Correspondence Analysis identified nine station groups corresponding to benthic faunal assemblages and their characteristic species. Multiple Discriminant Analysis showed that the main environmental factors influencing the distribution of faunal assemblages were sediment parameters and distance from the ocean. Depth was a minor structuring factor. At the scale of the lagoon, biogenic structures such as Zostera marina beds, Crepidula fornicata-dominated bottoms or dead oyster shell bottoms did not display any particular assemblage of infauna. Comparison with previous quantitative data from the 1988 survey provided more precision on the distribution of benthic assemblages and revealed community changes at a 14-year scale. These modifications reflected a general increase of silt and clay content in the sediment in the internal parts of channels, inducing community change. These changes can be correlated to the recent first signs of a moderate eutrophication process which have appeared, since 1988, through the development of green macroalgae in some parts of the lagoon. This trend was enhanced in transverse channels with reduced hydrodynamics and led to muddy areas where green macroalgae tended to accumulate. Locally, the dredging of sandbanks induced stronger currents and allowed the marine influence to occur, and also induced community change. These observations confirm that surveys of macrobenthic communities are useful tools to assess coastal ecosystem change even in moderately disturbed environments.

Distribution of juvenile Pacific herring relative to environmental and geospatial factors in Prince William Sound, Alaska

NASA Astrophysics Data System (ADS)

Lewandoski, Sean; Bishop, Mary Anne

2018-01-01

Documenting distribution patterns of juvenile Pacific herring (Clupea pallasii) can clarify habitat preferences and provide insight into ecological factors influencing early life survival. However, few analyses relating juvenile Pacific herring density to habitat characteristics have been conducted. We sampled age-0 Pacific herring in nine bays and fjords distributed throughout Alaska's Prince William Sound during November over a 3-year period (2013-2015) and investigated associations between catch rate and habitat covariates using generalized linear mixed models. Our results indicated that the night-time distribution of age-0 Pacific herring in the pelagic environment was influenced by proximity to eelgrass (Zostera marina) beds, salinity, and water depth. Age-0 Pacific herring catch rate was negatively associated with tow depth, with herring favoring shallower water across the range of depths sampled (7.2-35.4 m). In addition, Pacific herring distribution was positively associated with fresher water within the sampled salinity gradient (24.1-32.3 psu) and proximity to eelgrass beds. Seasonal changes in juvenile Pacific herring distribution were investigated by sampling one bay over a seven month period (October-April). Age-0 Pacific herring tended to remain in the inner bay region throughout the seven months, while age-1 Pacific herring had shifted from the inner to the outer bay by spring (March-April). Additionally, catch rate of age-0 Pacific herring in areas where ice breakup had just occurred was higher than in open water, suggesting that age-0 herring preferentially select ice-covered habitats when available. Based on our results we recommend that habitat preferences of age-0 Pacific herring should be considered in the development of Pacific herring year-class strength indices from catch data.

A SNARE-Like Superfamily Protein SbSLSP from the Halophyte Salicornia brachiata Confers Salt and Drought Tolerance by Maintaining Membrane Stability, K+/Na+ Ratio, and Antioxidant Machinery

PubMed Central

Singh, Dinkar; Yadav, Narendra Singh; Tiwari, Vivekanand; Agarwal, Pradeep K.; Jha, Bhavanath

2016-01-01

About 1000 salt-responsive ESTs were identified from an extreme halophyte Salicornia brachiata. Among these, a novel salt-inducible gene SbSLSP (Salicornia brachiata SNARE-like superfamily protein), showed up-regulation upon salinity and dehydration stress. The presence of cis-regulatory motifs related to abiotic stress in the putative promoter region supports our finding that SbSLSP gene is inducible by abiotic stress. The SbSLSP protein showed a high sequence identity to hypothetical/uncharacterized proteins from Beta vulgaris, Spinacia oleracea, Eucalyptus grandis, and Prunus persica and with SNARE-like superfamily proteins from Zostera marina and Arabidopsis thaliana. Bioinformatics analysis predicted a clathrin adaptor complex small-chain domain and N-myristoylation site in the SbSLSP protein. Subcellular localization studies indicated that the SbSLSP protein is mainly localized in the plasma membrane. Using transgenic tobacco lines, we establish that overexpression of SbSLSP resulted in elevated tolerance to salt and drought stress. The improved tolerance was confirmed by alterations in a range of physiological parameters, including high germination and survival rate, higher leaf chlorophyll contents, and reduced accumulation of Na+ ion and reactive oxygen species (ROS). Furthermore, overexpressing lines also showed lower water loss, higher cell membrane stability, and increased accumulation of proline and ROS-scavenging enzymes. Overexpression of SbSLSP also enhanced the transcript levels of ROS-scavenging and signaling enzyme genes. This study is the first investigation of the function of the SbSLSP gene as a novel determinant of salinity/drought tolerance. The results suggest that SbSLSP could be a potential candidate to increase salinity and drought tolerance in crop plants for sustainable agriculture in semi-arid saline soil. PMID:27313584

Resource use of an aquacultured shellfish in the reverse estuary Bahía San Quintín, Baja California, México

NASA Astrophysics Data System (ADS)

Wilkinson, G. M.; Emery, K.; Camacho-Ibar, V.; Pace, M.; McGlathery, K.; Sandoval Gil, J.; Hernandez-Lopez, J.

2016-02-01

Shellfish aquaculture is prominent in many coastal and estuarine environments. Filter feeding by cultured shellfish connects the benthic and pelagic environments in coastal ecosystems. Bahía San Quintín is a reverse estuary in Baja California, Mexico, where Pacific oysters (Crassostrea gigas) are cultivated. While oysters likely feed heavily on phytoplankton especially during upwelling periods, we hypothesized that other forms of organic matter available in high quantities such as seagrass (Zostera marina) and macroalgae (Ulva spp.) must also be used by the oysters, especially in the most inshore portions of the bay. We measured the carbon and hydrogen stable isotope composition of oysters and their potential food resources at upper, mid, and lower bay sites during upwelling and non-upwelling seasons and applied a Bayesian mixing model to evaluate resource use. Hydrogen isotopes provided a large separation between potential food resources. Although we did not find any strong seasonal effects due to upwelling, there was a strong spatial gradient in resource use. Phytoplankton were most important at the lower (oceanic) site (median resource use for two sampling times, 68 and 79 %) and decreased up the estuary as macroalgae became more important (43 and 56 % at the upper site). At all sites for both sampling times, seagrass was an unimportant resource for oysters. The contrast between high phytoplankton use at the lower site and increased macroalgal use at the upper site is likely due to available resource biomass. Our results illustrate the adaptability of oysters to varying resource availability and the possibility of a higher system carrying capacity than that based on phytoplankton alone given multiple potential food sources.

Recovery of a top predator mediates negative eutrophic effects on seagrass

USGS Publications Warehouse

Hughes, Brent B.; Eby, Ron; Van Dyke, Eric; Tinker, M. Tim; Marks, Corina I.; Johnson, Kenneth S.; Wasson, Kerstin

2013-01-01

A fundamental goal of the study of ecology is to determine the drivers of habitat-forming vegetation, with much emphasis given to the relative importance to vegetation of “bottom-up” forces such as the role of nutrients and “top-down” forces such as the influence of herbivores and their predators. For coastal vegetation (e.g., kelp, seagrass, marsh, and mangroves) it has been well demonstrated that alterations to bottom-up forcing can cause major disturbances leading to loss of dominant vegetation. One such process is anthropogenic nutrient loading, which can lead to major changes in the abundance and species composition of primary producers, ultimately affecting important ecosystem services. In contrast, much less is known about the relative importance of apex predators on coastal vegetated ecosystems because most top predator populations have been depleted or lost completely. Here we provide evidence that an unusual four-level trophic cascade applies in one such system, whereby a top predator mitigates the bottom-up influences of nutrient loading. In a study of seagrass beds in an estuarine ecosystem exposed to extreme nutrient loading, we use a combination of a 50-y time series analysis, spatial comparisons, and mesocosm and field experiments to demonstrate that sea otters (Enhydra lutris) promote the growth and expansion of eelgrass (Zostera marina) through a trophic cascade, counteracting the negative effects of agriculturally induced nutrient loading. Our results add to a small but growing body of literature illustrating that significant interactions between bottom-up and top-down forces occur, in this case with consequences for the conservation of valued ecosystem services provided by seagrass.

Recovery of a top predator mediates negative eutrophic effects on seagrass

PubMed Central

Hughes, Brent B.; Eby, Ron; Van Dyke, Eric; Tinker, M. Tim; Marks, Corina I.; Johnson, Kenneth S.; Wasson, Kerstin

2013-01-01

A fundamental goal of the study of ecology is to determine the drivers of habitat-forming vegetation, with much emphasis given to the relative importance to vegetation of “bottom-up” forces such as the role of nutrients and “top-down” forces such as the influence of herbivores and their predators. For coastal vegetation (e.g., kelp, seagrass, marsh, and mangroves) it has been well demonstrated that alterations to bottom-up forcing can cause major disturbances leading to loss of dominant vegetation. One such process is anthropogenic nutrient loading, which can lead to major changes in the abundance and species composition of primary producers, ultimately affecting important ecosystem services. In contrast, much less is known about the relative importance of apex predators on coastal vegetated ecosystems because most top predator populations have been depleted or lost completely. Here we provide evidence that an unusual four-level trophic cascade applies in one such system, whereby a top predator mitigates the bottom-up influences of nutrient loading. In a study of seagrass beds in an estuarine ecosystem exposed to extreme nutrient loading, we use a combination of a 50-y time series analysis, spatial comparisons, and mesocosm and field experiments to demonstrate that sea otters (Enhydra lutris) promote the growth and expansion of eelgrass (Zostera marina) through a trophic cascade, counteracting the negative effects of agriculturally induced nutrient loading. Our results add to a small but growing body of literature illustrating that significant interactions between bottom-up and top-down forces occur, in this case with consequences for the conservation of valued ecosystem services provided by seagrass. PMID:23983266

Reconstruction of historic sea ice conditions in a sub-Arctic lagoon

USGS Publications Warehouse

Petrich, Chris; Tivy, Adrienne C.; Ward, David H.

2014-01-01

Historical sea ice conditions were reconstructed for Izembek Lagoon, Bering Sea, Alaska. This lagoon is a crucial staging area during migration for numerous species of avian migrants and a major eelgrass (Zostera marina) area important to a variety of marine and terrestrial organisms, especially Pacific Flyway black brant geese (Branta bernicla nigricans). Ice cover is a common feature of the lagoon in winter, but appears to be declining, which has implications for eelgrass distribution and abundance, and its use by wildlife. We evaluated ice conditions from a model based on degree days, calibrated to satellite observations, to estimate distribution and long-term trends in ice conditions in Izembek Lagoon. Model results compared favorably with ground observations and 26 years of satellite data, allowing ice conditions to be reconstructed back to 1943. Specifically, periods of significant (limited access to eelgrass areas) and severe (almost complete ice coverage of the lagoon) ice conditions could be identified. The number of days of severe ice within a single season ranged from 0 (e.g., 2001) to ≥ 67 (e.g., 2000). We detected a slight long-term negative trend in ice conditions, superimposed on high inter-annual variability in seasonal aggregate ice conditions. Based on reconstructed ice conditions, the seasonally cumulative number of significant or severe ice days correlated linearly with mean air temperature from January until March. Further, air temperature at Izembek Lagoon was correlated with wind direction, suggesting that ice conditions in Izembek Lagoon were associated with synoptic-scale weather patterns. Methods employed in this analysis may be transferable to other coastal locations in the Arctic.

Distribution and diversity of tunicates utilizing eelgrass as substrate in the western North Atlantic between 39° and 47° north latitude (New Jersey to Newfoundland)

USGS Publications Warehouse

Carman, M R; Colarusso, Phillip D; Nelson, Eric P; Grunden, David W; Wong, Melisa C; McKenzie, Cynthia; Matheson, Kyle; Davidson, Jeffrey G.; Fox, Sophia; Neckles, Hilary A.; Bayley, Holly; Schott, Stephen; Dijkstra, Jennifer A; Stewart-Clark, Sarah

2016-01-01

Seagrass meadows are ecologically important habitats that are declining globally at an accelerating rate due to natural and anthropogenic stressors. Their decline is a serious concern as this habitat provides many ecosystem services. Eelgrass (Zostera marina) is the dominant seagrass species in the western North Atlantic. It has recently been established that invasive tunicate species possibly threaten the health of eelgrass beds. Colonization of eelgrass leaves by tunicates can inhibit eelgrass growth and may cause shoot mortality. To document the distribution and diversity of tunicate species that attach to eelgrass in the western North Atlantic, we surveyed twenty-one eelgrass sites from New Jersey to Newfoundland. Eight species of tunicates were found to be colonizing eelgrass, of which 6 are considered invasive. Botrylloides violaceus and Botryllus schlosseri were most commonly attached to eelgrass, with B. schlosseri having the largest latitudinal range of any species. Tunicate faunas attached to eelgrass were less diverse north of Gloucester, Massachusetts, where individual survey sites exhibited two species at most and only 4 of the 8 species observed in this study. Percent tunicate cover on eelgrass tended to fall within the 1–25 range, with occasional coverage up to >75–100. Density of eelgrass was highly variable among sites, ranging from <1 to 820 shoots/m². The solitary tunicate Ciona intestinalis was only found on eelgrass at the highest latitude sampled, in Newfoundland, where it is a new invader. The tunicates observed in this study, both solitary and colonial, are viable when attached to eelgrass and pose a potential threat to overgrow and weaken seagrass shoots and reduce the sustainability of seagrass meadows.

Analysis of Toxic and Non-Toxic Alexandrium (Dinophyceae) Species Using Ribosomal RNA Gene Sequences

DTIC Science & Technology

1993-02-01

Therriault, J.-C. (1988). Cladistic analysis of electrophoretic variants within the toxic dinoflagellate genus Protogonyaulax. Botanica Marina 31: 39- 51. 8... Botanica Marina 34: 575-587. Halegraeff, G. M., and Bolch, C.J. (1992). Transport of toxic dinoflagellate cysts via ship’s ballast water: implications...analysis of electrophoretic variants within the toxic dinoflagellate genus Protogonv-u.!a,. Botanica Marina 31: 39-51. Curran, J., Baillie, D.L

A primer on wood as dock construction material

Treesearch

Stan Lebow

2007-01-01

To be a successful marina owner and operator, it’s important to understand all the facets of one’s facility, including the intricacies of one part of the marina that most boaters take for granted: the docks. When it comes to dock construction, marinas have a wide-range of materials to choose from, with one of the most commonly used materials being preservative-treated...

Efficiency of Photosynthesis in a Chl d-Utilizing Cyanobacterium is Comparable to or Higher than that in Chl a-Utilizing Oxygenic Species

NASA Technical Reports Server (NTRS)

Mielke, S. P.; Kiang, N. Y.; Blankenship, R. E.; Gunner, M. R.; Mauzerall, D.

2011-01-01

The cyanobacterium Acaryochloris marina uses chlorophyll d to carry out oxygenic photosynthesis in environments depleted in visible and enhanced in lower-energy, far-red light. However, the extent to which low photon energies limit the efficiency of oxygenic photochemistry in A. marina is not known. Here, we report the first direct measurements of the energy-storage efficiency of the photosynthetic light reactions in A. marina whole cells,and find it is comparable to or higher than that in typical, chlorophyll a-utilizing oxygenic species. This finding indicates that oxygenic photosynthesis is not fundamentally limited at the photon energies employed by A. marina, and therefore is potentially viable in even longer-wavelength light environments.

Atopic asthmatic subjects but not atopic subjects without ...

EPA Pesticide Factsheets

BACKGROUND: Asthma is a known risk factor for acute ozone-associated respiratory disease. Ozone causes an immediate decrease in lung function and increased airway inflammation. The role of atopy and asthma in modulation of ozone-induced inflammation has not been determined. OBJECTIVE: We sought to determine whether atopic status modulates ozone response phenotypes in human subjects. METHODS: Fifty volunteers (25 healthy volunteers, 14 atopic nonasthmatic subjects, and 11 atopic asthmatic subjects not requiring maintenance therapy) underwent a 0.4-ppm ozone exposure protocol. Ozone response was determined based on changes in lung function and induced sputum composition, including airway inflammatory cell concentration, cell-surface markers, and cytokine and hyaluronic acid concentrations. RESULTS: All cohorts experienced similar decreases in lung function after ozone. Atopic and atopic asthmatic subjects had increased sputum neutrophil numbers and IL-8 levels after ozone exposure; values did not significantly change in healthy volunteers. After ozone exposure, atopic asthmatic subjects had significantly increased sputum IL-6 and IL-1beta levels and airway macrophage Toll-like receptor 4, Fc(epsilon)RI, and CD23 expression; values in healthy volunteers and atopic nonasthmatic subjects showed no significant change. Atopic asthmatic subjects had significantly decreased IL-10 levels at baseline compared with healthy volunteers; IL-10 levels did not significa

Meiofauna of mangroves of the southeast coast of India with special reference to the free-living marine nematode assemblage

NASA Astrophysics Data System (ADS)

Chinnadurai, Gunasekaran; Fernando, Olivia Jegaletchmi

2007-03-01

The spatial variations of meiofauna population density and the assemblage of free-living marine nematodes in areas with Avicennia marina and Rhizophora apiculata cover of Pichavaram and Parangipettai (southeast coast of India) are described. Seven meiofauna taxa were recorded, with maximum density of meiofauna (890 ind. 10 cm -2) being recorded in an area with A. marina cover. Nematodes accounted for up to 93.1% of the total densities; other common taxa were foraminifera and polychaeta. A total of 44 species of nematodes belonging to 36 genera and 20 families were recorded. Of these, 37 species belonging to 30 genera and 17 families were recorded from Pichavaram mangrove and 14 species belonging to 10 families from a nearby artificial mangrove environment. While 16 species were common to both A. marina and R. apiculata cover, 15 species were restricted to areas with A. marina cover and 13 to areas with R. apiculata cover. Dorylaimopsis sp. was the abundant genera in areas with A. marina cover and Daptonema sp. in areas with R. apiculata cover. Only three species were common in all the five stations. Epistrate-feeders were the most abundant nematodes in areas with A. marina cover and deposit-feeders/ciliate feeders in areas with R. apiculata cover.

Acute thermal stressor increases glucocorticoid response but minimizes testosterone and locomotor performance in the cane toad (Rhinella marina).

PubMed

Narayan, Edward J; Hero, Jean-Marc

2014-01-01

Climatic warming is a global problem and acute thermal stressor in particular could be considered as a major stressor for wildlife. Cane toads (Rhinella marina) have expanded their range into warmer regions of Australia and they provide a suitable model species to study the sub-lethal impacts of thermal stressor on the endocrine physiology of amphibians. Presently, there is no information to show that exposure to an acute thermal stressor could initiate a physiological stress (glucocorticoid) response and secondly, the possible effects on reproductive hormones and performance. Answering these questions is important for understanding the impacts of extreme temperature on amphibians. In this study, we experimented on cane toads from Queensland, Australia by acclimating them to mildly warm temperature (25°C) and then exposing to acute temperature treatments of 30°, 35° or 40°C (hypothetical acute thermal stressors). We measured acute changes in the stress hormone corticosterone and the reproductive hormone testosterone using standard capture and handling protocol and quantified the metabolites of both hormones non-invasively using urinary enzyme-immunoassays. Furthermore, we measured performance trait (i.e. righting response score) in the control acclimated and the three treatment groups. Corticosterone stress responses increased in all toads during exposure to an acute thermal stressor. Furthermore, exposure to a thermal stressor also decreased testosterone levels in all toads. The duration of the righting response (seconds) was longer for toads that were exposed to 40°C than to 30°, 35° or 25°C. The increased corticosterone stress response with increased intensity of the acute thermal stressor suggests that the toads perceived this treatment as a stressor. Furthermore, the results also highlight a potential trade-off with performance and reproductive hormones. Ultimately, exposure acute thermal stressors due to climatic variability could impact amphibians at

Acute Thermal Stressor Increases Glucocorticoid Response but Minimizes Testosterone and Locomotor Performance in the Cane Toad (Rhinella marina)

PubMed Central

Narayan, Edward J.; Hero, Jean-Marc

2014-01-01

Climatic warming is a global problem and acute thermal stressor in particular could be considered as a major stressor for wildlife. Cane toads (Rhinella marina) have expanded their range into warmer regions of Australia and they provide a suitable model species to study the sub-lethal impacts of thermal stressor on the endocrine physiology of amphibians. Presently, there is no information to show that exposure to an acute thermal stressor could initiate a physiological stress (glucocorticoid) response and secondly, the possible effects on reproductive hormones and performance. Answering these questions is important for understanding the impacts of extreme temperature on amphibians. In this study, we experimented on cane toads from Queensland, Australia by acclimating them to mildly warm temperature (25°C) and then exposing to acute temperature treatments of 30°, 35° or 40°C (hypothetical acute thermal stressors). We measured acute changes in the stress hormone corticosterone and the reproductive hormone testosterone using standard capture and handling protocol and quantified the metabolites of both hormones non-invasively using urinary enzyme-immunoassays. Furthermore, we measured performance trait (i.e. righting response score) in the control acclimated and the three treatment groups. Corticosterone stress responses increased in all toads during exposure to an acute thermal stressor. Furthermore, exposure to a thermal stressor also decreased testosterone levels in all toads. The duration of the righting response (seconds) was longer for toads that were exposed to 40°C than to 30°, 35° or 25°C. The increased corticosterone stress response with increased intensity of the acute thermal stressor suggests that the toads perceived this treatment as a stressor. Furthermore, the results also highlight a potential trade-off with performance and reproductive hormones. Ultimately, exposure acute thermal stressors due to climatic variability could impact amphibians at

Analysis of concentration-dependent effects of copper and PCB on different Chattonella spp. microalgae (raphidophyceae) cultivated in artificial seawater medium

PubMed Central

Niestroy, Jeanette; Martínez, Alfonso Bárbara; Band-Schmidt, Christine J.

2014-01-01

In the present study, the effect on the chlorophyll a and the total protein content as well as the Chattonella spp. cell viability were examined after concentration-dependent exposure to CuCl2 and Aroclor 1242. The comparison between various raphidophyte strains provides an insight into the different susceptibilities to contaminants of Chattonella subsalsa (CSNAV-1), C. marina var. marina (CMCV-1) and C. marina var. ovata (COPV-2). The microalgae were cultivated in artificial seawater medium. Exponentially growing microalgae (8-10 days in culture) were used for exposure experiments. We observed in all three raphidophyte species cytotoxicity-mediated modifications beginning at concentrations of 150 and 200 µM of the heavy metal copper after 24 hours exposure. But interestingly, the three strains exhibited only slight differences in their susceptibility to CuCl2. C. subsalsa and C. marina var. marina cells were first affected at the chlorophyll a level and in cell viability. The total protein amount was reduced significantly only after exposure to 300 µM of CuCl2. However, C. marina var. ovata microalgae showed similar reduction curves for all three analysed cytotoxicity endpoints after heavy metal exposure. On the other hand, after Aroclor 1242 incubation the cytotoxic modification pattern indicated clearly the different susceptibilities of the three raphidophyte strains. C. subsalsa cells noticeably exhibited a decrease in the analysed pigment amount (30-20 % compared to that of the control) already after 0.007 mg/L PCB exposure. In contrast, cell viability and total protein content were slightly reduced and fell below the 50 % threshold after 0.7 and 3.3 mg/L of Aroclor 1242, respectively. Interestingly, C. marina var. ovata showed almost no cytotoxic modification caused by the PCB mixture. Only the concentration of 0.7 mg/L Aroclor 1242 clearly affected the cell viability. As opposed to that we observed a concentration-dependent decrease of cell viability and

Analysis of concentration-dependent effects of copper and PCB on different Chattonella spp. microalgae (raphidophyceae) cultivated in artificial seawater medium.

PubMed

Niestroy, Jeanette; Martínez, Alfonso Bárbara; Band-Schmidt, Christine J

2014-01-01

In the present study, the effect on the chlorophyll a and the total protein content as well as the Chattonella spp. cell viability were examined after concentration-dependent exposure to CuCl2 and Aroclor 1242. The comparison between various raphidophyte strains provides an insight into the different susceptibilities to contaminants of Chattonella subsalsa (CSNAV-1), C. marina var. marina (CMCV-1) and C. marina var. ovata (COPV-2). The microalgae were cultivated in artificial seawater medium. Exponentially growing microalgae (8-10 days in culture) were used for exposure experiments. We observed in all three raphidophyte species cytotoxicity-mediated modifications beginning at concentrations of 150 and 200 µM of the heavy metal copper after 24 hours exposure. But interestingly, the three strains exhibited only slight differences in their susceptibility to CuCl2. C. subsalsa and C. marina var. marina cells were first affected at the chlorophyll a level and in cell viability. The total protein amount was reduced significantly only after exposure to 300 µM of CuCl2. However, C. marina var. ovata microalgae showed similar reduction curves for all three analysed cytotoxicity endpoints after heavy metal exposure. On the other hand, after Aroclor 1242 incubation the cytotoxic modification pattern indicated clearly the different susceptibilities of the three raphidophyte strains. C. subsalsa cells noticeably exhibited a decrease in the analysed pigment amount (30-20 % compared to that of the control) already after 0.007 mg/L PCB exposure. In contrast, cell viability and total protein content were slightly reduced and fell below the 50 % threshold after 0.7 and 3.3 mg/L of Aroclor 1242, respectively. Interestingly, C. marina var. ovata showed almost no cytotoxic modification caused by the PCB mixture. Only the concentration of 0.7 mg/L Aroclor 1242 clearly affected the cell viability. As opposed to that we observed a concentration-dependent decrease of cell viability and

The ISI Tunnel

DTIC Science & Technology

1993-10-01

INFORMATION SCIENCES 310/822-1511 INSTITUTE 4676 Admrraltp Wa.v/Marina del Rev/calfornia 90292-6695 The ISI "Tunnel" Annette DeSchon and Danny Cohen...ISI/SR-93-358 October 1993 University of Southern California Information Sciences Institute 4676 Adniralry Way, Marina del Rey, CA 90292-6695 310-822...ES) B. PERFORMING ORGANIZATION USC/ Information Science Institute 4676 Admiralty Way ISI/SR-93-358 Marina del Rey, CA 90292-6695 2. SPONSORING

Naval Ocean Research and Development Activity Journal Index for 1976 thru 1984,

DTIC Science & Technology

1985-03-01

and Antibiotics. Venezuela Basin. Deep-Sea Research, v. 31, Botanica Marina, v. XXIV, p. 399-404. p. 403-414. Thompson, J. Dana (1978). Ocean Deserts...v. 29, n. 102, p. 286-295. Phytoplankton Extracellular Products. Botanica marina, v~. XXXVI, p. 375-381. Radl, C.J. and J.P. Welsh (1983). Inventory...Experiments tion and Antibiotics. Botanica Marina, v. XXIV, in the Indian River Estuary, Florida. Journal of p. 399-404. ?. Marine Research, v. 36, p, 569-593

78 FR 62007 - Alabama Power Company; Notice of Application Accepted for Filing, Soliciting Comments, Motions To...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-10-11

... with the Dixie Sailing Club. The marina's facilities to be located inside the project boundary would... would be sailboats. The marina's facilities would be associated with the Dixie Sailing Club's clubhouse...

A subjective scheduler for subjective dedicated networks

NASA Astrophysics Data System (ADS)

Suherman; Fakhrizal, Said Reza; Al-Akaidi, Marwan

2017-09-01

Multiple access technique is one of important techniques within medium access layer in TCP/IP protocol stack. Each network technology implements the selected access method. Priority can be implemented in those methods to differentiate services. Some internet networks are dedicated for specific purpose. Education browsing or tutorial video accesses are preferred in a library hotspot, while entertainment and sport contents could be subjects of limitation. Current solution may use IP address filter or access list. This paper proposes subjective properties of users or applications are used for priority determination in multiple access techniques. The NS-2 simulator is employed to evaluate the method. A video surveillance network using WiMAX is chosen as the object. Subjective priority is implemented on WiMAX scheduler based on traffic properties. Three different traffic sources from monitoring video: palace, park, and market are evaluated. The proposed subjective scheduler prioritizes palace monitoring video that results better quality, xx dB than the later monitoring spots.

On observing high frequency dynamics in coastal regions: latest insights of the MARINA project.

NASA Astrophysics Data System (ADS)

Roblou, Laurent; Delebecque, Caroline; Vignudelli, Stefano; Jerome, Bouffard; Cipollini, Paolo; Morrow, Rosemary; Birol, Florence

(ALtimeter-Based Investigations in COrsica, Capraia and Contiguous Areas) project and this leads to the X-TRACK software. Numerous studies have since illustrated the benefits of such software to the overall improvement of al-timeter product quality in the coastal systems. A key-task of MARgin Integrated Approach (MARINA) project funded by the French Space Agency CNES is to extend the potential of the software and its products to the high rate measurements provided in the altimetry prod-ucts. In this paper, high resolution, optimized coastal altimetry products from the X-TRACK processor and other datasets coming from PISTACH and COASTALT projects, respectively funded by CNES and European Space Agency ESA, have been compared to in situ observa-tions in the Straits of Bonifaccio, a pilot site in the area of Corsica and Sardinia islands in the NW Mediterranean Sea. The results of this study are illustrated, highlighting the potential and limitations of such data sets for monitoring coastal dynamics and toward integration into coastal hydrodynamical models.

Subject Classification.

ERIC Educational Resources Information Center

Thompson, Gayle; And Others

Three newspaper librarians described how they manage the files of newspaper clippings which are a necessary part of their collections. The development of a new subject classification system for the clippings files was outlined. The new subject headings were based on standard subject heading lists and on local need. It was decided to use a computer…

Macrofauna on flood delta shoals in the Wadden Sea with an underground association between the lugworm Arenicola marina and the amphipod Urothoe poseidonis

NASA Astrophysics Data System (ADS)

Lackschewitz, D.; Reise, K.

1998-06-01

Living conditions for macrofauna on flood delta shoals are determined by surf, strong currents and sediment mobility. Thus, a unique assemblage of invertebrate species colonize these far off-shore, low intertidal flats. We here describe the macrobenthic fauna of emerging shoals in the Wadden Sea between the islands of Römö and Sylt. Besides ubiquitous macroinvertebrates of the intertidal zone and species which attain their main distribution in the subtidal zone, the flood delta shoals are characterized by organisms adapted to live in these highly unstable sediments, like the polychaetes Spio martinensis, Streptosyllis websteri, Magelona mirabilis, Psammodrilus balanoglossoides, the pericarid crustaceans Cumopsis goodsiri, Tanaissus lilljeborgi, Bathyporeia sarsi and a few others. Average abundance (1440 m-2 of ind >1 mm) and biomass (12.9 g AFDW m-2) were low compared to other intertidal habitats in the Wadden Sea. Biomass was dominated by largesized individuals of the lugworm Arenicola marina. The U-shaped burrows of these polychaetes were inhabited by high numbers of Urothoe poseidonis. Maximum densities of these amphipods occurred in the deepest parts of the burrows. Sampling at approximately montly intervals revealed no apparent seasonality of U. poseidonis abundance. Together with small Capitella capitata, these amphipods constitute a deep-dwelling component of the macrofauna associated with lugworms, which is separated from all other macrofauna living at the sediment surface. As a response to rising sea level and increasing tidal ranges, we expect the unstable sandy shoals, inhabited by numerous Spio martinensis and Urothoe poseidonis, to expand within the Wadden Sea at the cost of stable sandy flats with abundant macrofauna.

Viral discovery in the invasive Australian cane toad (Rhinella marina) using metatranscriptomic and genomic approaches.

PubMed

Russo, Alice G; Eden, John-Sebastian; Enosi Tuipulotu, Daniel; Shi, Mang; Selechnik, Daniel; Shine, Richard; Rollins, Lee Ann; Holmes, Edward C; White, Peter A

2018-06-13

Cane toads are a notorious invasive species, inhabiting over 1.2 million km 2 of Australia and threatening native biodiversity. Release of pathogenic cane toad viruses is one possible biocontrol strategy yet is currently hindered by the poorly-described cane toad virome. Metatranscriptomic analysis of 16 cane toad livers revealed the presence of a novel and full-length picornavirus, Rhimavirus A (RhiV-A), a member of a reptile and amphibian specific-cluster of the Picornaviridae basal to the Kobuvirus -like group. In the combined liver transcriptome, we also identified a complete genome sequence of a distinct epsilonretrovirus, R. marina endogenous retrovirus (RMERV). The recently sequenced cane toad genome contains eight complete RMERV proviruses, as well as 21 additional truncated insertions. The oldest full length RMERV provirus was estimated to have inserted 1.9 MYA. To screen for these viral sequences in additional toads, we analysed publicly available transcriptomes from six diverse Australian locations. RhiV-A transcripts were identified in toads sampled from three locations across 1,000 km of Australia, stretching to the current Western Australia (WA) invasion front, whilst RMERV transcripts were observed at all six sites. Lastly, we scanned the cane toad genome for non-retroviral endogenous viral elements, finding three sequences related to small DNA viruses in the family Circoviridae This shows ancestral circoviral infection with subsequent genomic integration. The identification of these current and past viral infections enriches our knowledge of the cane toad virome, an understanding of which will facilitate future work on infection and disease in this important invasive species. Importance Cane toads are poisonous amphibians which were introduced to Australia in 1935 for insect control. Since then, their population has increased dramatically, and they now threat many native Australian species. One potential method to control the population is to

Environmental and eelgrass response to dike removal: Nisqually River Delta (2010–14)

USGS Publications Warehouse

Takesue, Renee K.

2016-10-03

Restoration of tidal flows to formerly diked marshland can alter land-to-sea fluxes and patterns of accumulation of terrestrial sediment and organic matter, and these tidal flows can also affect existing nearshore habitats. Dikes were removed from 308 hectares (ha) of the Nisqually National Wildlife Refuge on the Nisqually River Delta in south Puget Sound, Washington, in fall 2009 to improve habitat for wildlife, such as juvenile salmon. Ecologically important intertidal and subtidal eelgrass (Zostera marina) beds grow on the north and west margins of the delta. The goal of this study was to understand long-term changes in eelgrass habitat and their relation to dike removal. Sediment and eelgrass properties were monitored annually in May from 2010 to 2014 at two sites on the west side of the Nisqually River Delta along McAllister Creek, a spring-fed creek near two restored tidal channels. In May 2014, the mean canopy height of eelgrass was the same as in previous years in an 8-ha bed extending to the Nisqually River Delta front, but mean canopy height was 20 percent lower in a 0.3-ha eelgrass bed closer to the restored marsh when compared to mean canopy height of eelgrass in May 2010, 6 months after dike removal was completed. Over 5 years, the amount of eelgrass leaf area per square meter (m2) in the 8-ha bed increased slightly, and surface-sediment grain size became finer. In contrast, in the 0.3-ha bed, eelgrass leaf area per m2 decreased by 45 percent, and surface sediment coarsened. Other potential stressors, including sediment pore water reduction-oxidation potential (redox) and hydrogen sulfide (H2S) concentration in the eelgrass rhizosphere, or root zone, were below levels that negatively affect eelgrass growth and therefore did not appear to be environmental stressors on plants. Eelgrass biomass partitioning, though less favorable in the 8-ha eelgrass bed compared to the 0.3-ha one, was well above the critical above-ground to below-ground biomass ratio of

North American Brant: Effects of changes in habitat and climate on population dynamics

USGS Publications Warehouse

Ward, David H.; Reed, Austin; Sedinger, James S.; Black, Jeffrey M.; Derksen, Dirk V.; Castelli, Paul M.

2005-01-01

We describe the importance of key habitats used by four nesting populations of nearctic brant (Branta bernicla) and discuss the potential relationship between changes in these habitats and population dynamics of brant. Nearctic brant, in contrast to most geese, rely on marine habitats and native intertidal plants during the non-breeding season, particularly the seagrass, Zostera, and the macroalgae, Ulva. Atlantic and Eastern High Arctic brant have experienced the greatest degradation of their winter habitats (northeastern United States and Ireland, respectively) and have also shown the most plasticity in feeding behavior. Black and Western High Arctic brant of the Pacific Flyway are the most dependent on Zostera, and are undergoing a shift in winter distribution that is likely related to climate change and its associated effects on Zostera dynamics. Variation in breeding propensity of Black Brant associated with winter location and climate strongly suggests that food abundance on the wintering grounds directly affects reproductive performance in these geese. In summer, salt marshes, especially those containing Carex and Puccinellia, are key habitats for raising young, while lake shorelines with fine freshwater grasses and sedges are important for molting birds. Availability and abundance of salt marshes has a direct effect on growth and recruitment of goslings and ultimately, plays an important role in regulating size of local brant populations. ?? 2005 Blackwell Publishing Ltd.

Seagrass beds as ocean acidification refuges for mussels? High resolution measurements of pCO2 and O2 in a Zostera marina and Mytilus edulis mosaic habitat

NASA Astrophysics Data System (ADS)

Saderne, V.; Fietzek, P.; Aßmann, S.; Körtzinger, A.; Hiebenthal, C.

2015-07-01

It has been speculated that macrophytes beds might act as a refuge for calcifiers from ocean acidification. In the shallow nearshores of the western Kiel Bay (Baltic Sea), mussel and seagrass beds are interlacing, forming a mosaic habitat. Naturally, the diverse physiological activities of seagrasses and mussels are affected by seawater carbonate chemistry and they locally modify it in return. Calcification by shellfishes is sensitive to seawater acidity; therefore the photosynthetic activity of seagrasses in confined shallow waters creates favorable chemical conditions to calcification at daytime but turn the habitat less favorable or even corrosive to shells at night. In contrast, mussel respiration releases CO2, turning the environment more favorable for photosynthesis by adjacent seagrasses. At the end of summer, these dynamics are altered by the invasion of high pCO2/low O2 coming from the deep water of the Bay. However, it is in summer that mussel spats settle on the leaves of seagrasses until migrating to the permanent habitat where they will grow adult. These early life phases (larvae/spats) are considered as most sensitive with regard to seawater acidity. So far, the dynamics of CO2 have never been continuously measured during this key period of the year, mostly due to the technological limitations. In this project we used a combination of state-of-the-art technologies and discrete sampling to obtain high-resolution time-series of pCO2 and O2 at the interface between a seagrass and a mussel patch in Kiel Bay in August and September 2013. From these, we derive the entire carbonate chemistry using statistical models. We found the monthly average pCO2 more than 50 % (approx. 640 μatm for August and September) above atmospheric equilibrium right above the mussel patch together with large diel variations of pCO2 within 24 h: 887 ± 331 μatm in August and 742 ± 281 μatm in September (mean ± SD). We observed important daily corrosiveness for calcium carbonates (Ωarag and Ωcalc < 1) centered on sunrise. On the positive side, the investigated habitat never suffered from hypoxia during the study period. We emphasize the need for more experiments on the impact of these acidic conditions on (juvenile) mussels with a focus on the distinct day-night variations observed.

The influence of four macrozoobenthic species on the abundance of the amphipod Corophium volutator on tidal flats of the Wadden Sea

NASA Astrophysics Data System (ADS)

Flach, E. C.

On the tidal flats of the Wadden Sea, a zonation pattern can be found with Corophium volutator and Nereis diversicolor as the dominating species of the upper intertidal zone and Arenicola marina and Cerastoderma edule as the dominating species of the lower zone. As C. volutator can live under a great variety of physical conditions, its restriction to higher areas might result from biotic interactions. This was investigated by field experiments on a tidal flat in the westernmost part of the Wadden Sea. Within large depopulated areas, small plots were recolonized with different densities of N. diversicolor, A. marina, C. edule and Macoma balthica and the subsequent settlement and dynamics of C. volutator were studied. In addition, A. marina and/or C. edule were added to or removed from small plots within a natural benthic community. Neither the presence of M. balthica not that of N. diversicolor significantly affected the abundance of C. volutator. A strongly negative effect was found of C. edule when present in high densities, whereas A. marina negatively affected C. volutator abundance already at relatively low densities. Local removals of A. marina and C. edule from their own zone resulted in increases of Corophium numbers at these locations and local additions of these species within the Corophium zone resulted in decreases of Corophium numbers at these locations. It is suggested that the major species to restrict C. volutator effectively to the upper tidal zone is A. marina.

Emerging and Submerging Shorelines: Impacts of Physical Change on Bioband Length

NASA Astrophysics Data System (ADS)

Kruger, L. E.; Johnson, A. C.; Gregovich, D.; Buma, B.; Noel, J.

2017-12-01

We approximated shifts in coastal benthic species for shoreline length units undergoing both sea level rise and relative sea level lowering (often post-glacial, termed isostatic rebound) where subsistence-based, southeast Alaska Natives reside. From six community centers, we examined 30 km radii shoreline reaches by merging relevant portions of the NOAA ShoreZone database with near shore bathymetry and measures of mean global sea level rise with local global positioning system information (GIS) of tectonic shift and isostatic rebound. For our analysis, we estimated change for 9,868 assessed shoreline length units having uniform substrate and biologic type over a 100-yr time span (2008-2108) using geometric analysis of shoreline attributes. For each shoreline length unit we assessed relationships among substrate, slope, exposure, and presence of five benthic species including eel grass (Zostera marina), blue mussel (Mytilus edulis), butter clams (Saxidomus gigantean), bull kelp (Nereocytis leutkeana), and foliose red algae including ribbon kelp (Palmaria sp.). Our research indicates that both emergence, up to 1.8 m, and submergence, up 0.2 m, of the land will result in disportionately larger shoreline length segment alterations for habitats in protected low-slope gradient bays and estuaries (dominated by eelgrass and butter clam habitats) with less change for rocky steep-gradient exposed penninsulas (red algae and canopy kelp). This trend, holding true regardless of isostatic rebound, tectonic shift or sea level rise rate, highlights the importance of initial geomorphology-based assessments serving to improve bio-physical, chemical, and socially-related coastal research. Where shorelines are emerging 30% decreases in estuary lengths are predicted, but where shorelines are submerging up to 3% increases in estuaries are expected. Our research results are consistent with anthropology studies assessing past coastal change. Coastal change, influencing subsistance foods

Biotic resistance to invasion along an estuarine gradient

PubMed Central

Hovel, Kevin A.

2010-01-01

Biotic resistance is the ability of native communities to repel the establishment of invasive species. Predation by native species may confer biotic resistance to communities, but the environmental context under which this form of biotic resistance occurs is not well understood. We evaluated several factors that influence the distribution of invasive Asian mussels (Musculista senhousia) in Mission Bay, a southern California estuary containing an extensive eelgrass (Zostera marina) habitat. Asian mussels exhibit a distinct spatial pattern of invasion, with extremely high densities towards the back of Mission Bay (up to 4,000 m−2) in contrast with near-complete absence at sites towards the front of the bay. We established that recruits arrived at sites where adult mussels were absent and found that dense eelgrass does not appear to preclude Asian mussel growth and survival. Mussel survival and growth were high in predator-exclusion plots throughout the bay, but mussel survival was low in the front of the bay when plots were open to predators. Additional experiments revealed that consumption by spiny lobsters (Panulirus interruptus) and a gastropod (Pteropurpura festiva) likely are the primary factors responsible for resistance to Asian mussel invasion. However, biotic resistance was dependent on location within the estuary (for both species) and also on the availability of a hard substratum (for P. festiva). Our findings indicate that biotic resistance in the form of predation may be conferred by higher order predators, but that the strength of resistance may strongly vary across estuarine gradients and depend on the nature of the locally available habitat. Electronic supplementary material The online version of this article (doi:10.1007/s00442-010-1700-7) contains supplementary material, which is available to authorized users. PMID:20602118

Response of a Habitat-Forming Marine Plant to a Simulated Warming Event Is Delayed, Genotype Specific, and Varies with Phenology

PubMed Central

Reynolds, Laura K.; DuBois, Katherine; Abbott, Jessica M.; Williams, Susan L.; Stachowicz, John J.

2016-01-01

Growing evidence shows that increasing global temperature causes population declines and latitudinal shifts in geographical distribution for plants living near their thermal limits. Yet, even populations living well within established thermal limits of a species may suffer as the frequency and intensity of warming events increase with climate change. Adaptive response to this stress at the population level depends on the presence of genetic variation in thermal tolerance in the populations in question, yet few data exist to evaluate this. In this study, we examined the immediate effects of a moderate warming event of 4.5°C lasting 5 weeks and the legacy effects after a 5 week recovery on different genotypes of the marine plant Zostera marina (eelgrass). We conducted the experiment in Bodega Bay, CA USA, where average summer water temperatures are 14–15°C, but extended warming periods of 17–18°C occur episodically. Experimental warming increased shoot production by 14% compared to controls held at ambient temperature. However, after returning temperature to ambient levels, we found strongly negative, delayed effects of warming on production: shoot production declined by 27% and total biomass decreased by 50% relative to individuals that had not been warmed. While all genotypes’ production decreased in the recovery phase, genotypes that grew the most rapidly under benign thermal conditions (control) were the most susceptible to the detrimental effects of warming. This suggests a potential tradeoff in relative performance at normal vs. elevated temperatures. Modest short-term increases in water temperature have potentially prolonged negative effects within the species’ thermal envelope, but genetic variation within these populations may allow for population persistence and adaptation. Further, intraspecific variation in phenology can result in maintenance of population diversity and lead to enhanced production in diverse stands given sufficient frequency of

Response of a Habitat-Forming Marine Plant to a Simulated Warming Event Is Delayed, Genotype Specific, and Varies with Phenology.

PubMed

Reynolds, Laura K; DuBois, Katherine; Abbott, Jessica M; Williams, Susan L; Stachowicz, John J

2016-01-01

Growing evidence shows that increasing global temperature causes population declines and latitudinal shifts in geographical distribution for plants living near their thermal limits. Yet, even populations living well within established thermal limits of a species may suffer as the frequency and intensity of warming events increase with climate change. Adaptive response to this stress at the population level depends on the presence of genetic variation in thermal tolerance in the populations in question, yet few data exist to evaluate this. In this study, we examined the immediate effects of a moderate warming event of 4.5°C lasting 5 weeks and the legacy effects after a 5 week recovery on different genotypes of the marine plant Zostera marina (eelgrass). We conducted the experiment in Bodega Bay, CA USA, where average summer water temperatures are 14-15°C, but extended warming periods of 17-18°C occur episodically. Experimental warming increased shoot production by 14% compared to controls held at ambient temperature. However, after returning temperature to ambient levels, we found strongly negative, delayed effects of warming on production: shoot production declined by 27% and total biomass decreased by 50% relative to individuals that had not been warmed. While all genotypes' production decreased in the recovery phase, genotypes that grew the most rapidly under benign thermal conditions (control) were the most susceptible to the detrimental effects of warming. This suggests a potential tradeoff in relative performance at normal vs. elevated temperatures. Modest short-term increases in water temperature have potentially prolonged negative effects within the species' thermal envelope, but genetic variation within these populations may allow for population persistence and adaptation. Further, intraspecific variation in phenology can result in maintenance of population diversity and lead to enhanced production in diverse stands given sufficient frequency of warming

Metabarcoding Is Powerful yet Still Blind: A Comparative Analysis of Morphological and Molecular Surveys of Seagrass Communities

PubMed Central

Cowart, Dominique A.; Pinheiro, Miguel; Mouchel, Olivier; Maguer, Marion; Grall, Jacques; Miné, Jacques; Arnaud-Haond, Sophie

2015-01-01

In the context of the sixth wave of extinction, reliable surveys of biodiversity are increasingly needed to infer the cause and consequences of species and community declines, identify early warning indicators of tipping points, and provide reliable impact assessments before engaging in activities with potential environmental hazards. DNA metabarcoding has emerged as having potential to provide speedy assessment of community structure from environmental samples. Here we tested the reliability of metabarcoding by comparing morphological and molecular inventories of invertebrate communities associated with seagrasses through estimates of alpha and beta diversity, as well as the identification of the most abundant taxa. Sediment samples were collected from six Zostera marina seagrass meadows across Brittany, France. Metabarcoding surveys were performed using both mitochondrial (Cytochrome Oxidase I) and nuclear (small subunit 18S ribosomal RNA) markers, and compared to morphological inventories compiled by a long-term benthic monitoring network. A sampling strategy was defined to enhance performance and accuracy of results by preventing the dominance of larger animals, boosting statistical support through replicates, and using two genes to compensate for taxonomic biases. Molecular barcodes proved powerful by revealing a remarkable level of diversity that vastly exceeded the morphological survey, while both surveys identified congruent differentiation of the meadows. However, despite the addition of individual barcodes of common species into taxonomic reference databases, the retrieval of only 36% of these species suggest that the remaining were either not present in the molecular samples or not detected by the molecular screening. This finding exemplifies the necessity of comprehensive and well-curated taxonomic reference libraries and multi-gene surveys. Overall, results offer methodological guidelines and support for metabarcoding as a powerful and repeatable

Constancy despite variability: Local and regional macrofaunal diversity in intertidal seagrass beds

NASA Astrophysics Data System (ADS)

Boyé, Aurélien; Legendre, Pierre; Grall, Jacques; Gauthier, Olivier

2017-12-01

The importance of seagrass habitat for the diversity of benthic fauna has been extensively studied worldwide. Most of the information available is, however, about α diversity while little consideration has been given to β diversity. To fill the knowledge gaps regarding the variability of epifaunal and infaunal seagrass assemblages at large spatial and temporal scales, we scrutinized an extensive dataset covering five years of monitoring of eight intertidal Zostera marina meadows around Brittany (France). High species richness arose at the regional scale from the combination of high local diversity of the meadows and substantial among-meadows β diversity. Epifauna and infauna appeared as distinct self-communities as they displayed different spatial and temporal patterns and varied in their responses to local hydrological conditions. Infauna had higher total β diversity than epifauna due to a tighter link to the great variability of local environmental conditions in the region. Both exhibited substantial variations in species composition and community structure with variations of dominant species that were accompanied by extensive change in numerous rare species. The dominant epifaunal species were all grazers. Changes in species composition were induced mostly by species replacement and rarely by richness differences between meadows. Indeed, species richness remained within a narrow range for all seagrass beds, suggesting a potential carrying capacity for species richness of the meadows. Overall, all meadows contributed equally to the regional turnover of seagrass macrofauna, emphasizing high variability and complementarity among beds at the regional scale. The implications of this substantial within-seagrass variability for the functioning of benthic ecosystems at broad scale and for conservation purposes in habitat mosaics warrant further investigations but our results clearly advocate taking into account within-habitat variation when evaluating the diversity

Local Competition and Metapopulation Processes Drive Long-Term Seagrass-Epiphyte Population Dynamics

PubMed Central

Lobelle, Delphine; Kenyon, Emma J.; Cook, Kevan J.; Bull, James C.

2013-01-01

It is well known that ecological processes such as population regulation and natural enemy interactions potentially occur over a range of spatial scales, and there is a substantial body of literature developing theoretical understanding of the interplay between these processes. However, there are comparatively few studies quantifying the long-term effects of spatial scaling in natural ecosystems. A key challenge is that trophic complexity in real-world biological communities quickly obscures the signal from a focal process. Seagrass meadows provide an excellent opportunity in this respect: in many instances, seagrasses effectively form extensive natural monocultures, in which hypotheses about endogenous dynamics can be formulated and tested. We present amongst the longest unbroken, spatially explict time series of seagrass abundance published to date. Data include annual measures of shoot density, total above-ground abundance, and associated epiphyte cover from five Zostera marina meadows distributed around the Isles of Scilly, UK, from 1996 to 2011. We explore empirical patterns at the local and metapopulation scale using standard time series analysis and develop a simple population dynamic model, testing the hypothesis that both local and metapopulation scale feedback processes are important. We find little evidence of an interaction between scales in seagrass dynamics but that both scales contribute approximately equally to observed local epiphyte abundance. By quantifying the long-term dynamics of seagrass-epiphyte interactions we show how measures of density and extent are both important in establishing baseline information relevant to predicting responses to environmental change and developing management plans. We hope that this study complements existing mechanistic studies of physiology, genetics and productivity in seagrass, whilst highlighting the potential of seagrass as a model ecosystem. More generally, this study provides a rare opportunity to test